| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is gnl [H]
Identifier: 146342599
GI number: 146342599
Start: 5965860
End: 5966786
Strand: Reverse
Name: gnl [H]
Synonym: BRADO5762
Alternate gene names: 146342599
Gene position: 5966786-5965860 (Counterclockwise)
Preceding gene: 146342600
Following gene: 146342598
Centisome position: 80.02
GC content: 66.24
Gene sequence:
>927_bases ATGTCCAACATGCGCGTGCTCGCCACCGATCTCGAATTCCCGGAAGGGCCGGTCGTGATGCCCGACGGCTCCGTGGTGCT GGTCGAGATCCGCGGGCGCCGGCTGACCCGGGTCCATCCCGACGGCCGCAAGGAGATCGTGGCGCAGATTCCCGGCGGCC CTAACGGCGCGGCCCTCGGACCCGACGGCAAGATCTACATCTGCAATAATGGCGGCTTCTCTTGGATTCCGACCGGCAAG ATGATCATGCCGGGCCCGCAGCCCGAGGATTATGTTGGCGGCTCGATCCAAACAGTCGATCTGCAGAGCGGCAAGGTTGA GACCGTCGTCAGCCATTGCGGCGAGCACGAGCTACGCGGGCCCAACGACCTCGTGTTCGACCGCCACGGCGGGTTGTGGT TCTCCGACCTCGGCAAGCGCCGCGCCCGCGACATGGATGTCGGCGCGTTCTATTATCTCAAGCCGGGCATGAGTGAGATC GTCGAGGCCGTGCACGGCATTCTGCCGGCTAACGGCATCGGCCTGTCGCCCGATGAGAAGACGGTCTATATCGCGGAGAC GCCGACCGCGCGGCTGTGGGCCTACGACGTGCCGGAGCCCGGCACGGTGAAGCCGCGCGACGTGATCTATCGCGGCGAGC GCGGCCGGCCGATCTGTGGCCTGGGCGGCTACCAGATGTTCGATTCGCTCGCGGTCGAAGCCAACGGCAATGTCTGCGTC GCGACGCTGGTGTCCGGCTGCATCAGCGTGATCGCGCCCGACGGCACCTTGGTCGAGCAGGTCCCGACCGGCGACCGCGT CACCACCAACATCGCCTTCGGCGGCCCGGAGCTGAAGACGGCCTACATCACGCTGTCGGGCAAGGGCGAACTGGTGGTCA TGGACTGGCCCCGCCCGGGGTTGCCGCTGAATTTTCTGAACAAGTGA
Upstream 100 bases:
>100_bases TCCGTGCGGCCGCTTGCTTGGCAAGCTGCGCGGGCTTTGCGATAACTCTCCGATAACAACAAGGCGCCGCACCGCGGCGT AACCAGCGGAGGTCCGTCCG
Downstream 100 bases:
>100_bases CGCTCCGCGTGATAGTGCCGTCATTGCGAGCGTCAGCGAAGCAATCCAGGGCCGCGCACGCGCTTCTGGATTGCTTCGTC GCTTGCGCTCCTCGCAATGA
Product: putative gluconolactonase
Products: NA
Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSNMRVLATDLEFPEGPVVMPDGSVVLVEIRGRRLTRVHPDGRKEIVAQIPGGPNGAALGPDGKIYICNNGGFSWIPTGK MIMPGPQPEDYVGGSIQTVDLQSGKVETVVSHCGEHELRGPNDLVFDRHGGLWFSDLGKRRARDMDVGAFYYLKPGMSEI VEAVHGILPANGIGLSPDEKTVYIAETPTARLWAYDVPEPGTVKPRDVIYRGERGRPICGLGGYQMFDSLAVEANGNVCV ATLVSGCISVIAPDGTLVEQVPTGDRVTTNIAFGGPELKTAYITLSGKGELVVMDWPRPGLPLNFLNK
Sequences:
>Translated_308_residues MSNMRVLATDLEFPEGPVVMPDGSVVLVEIRGRRLTRVHPDGRKEIVAQIPGGPNGAALGPDGKIYICNNGGFSWIPTGK MIMPGPQPEDYVGGSIQTVDLQSGKVETVVSHCGEHELRGPNDLVFDRHGGLWFSDLGKRRARDMDVGAFYYLKPGMSEI VEAVHGILPANGIGLSPDEKTVYIAETPTARLWAYDVPEPGTVKPRDVIYRGERGRPICGLGGYQMFDSLAVEANGNVCV ATLVSGCISVIAPDGTLVEQVPTGDRVTTNIAFGGPELKTAYITLSGKGELVVMDWPRPGLPLNFLNK >Mature_307_residues SNMRVLATDLEFPEGPVVMPDGSVVLVEIRGRRLTRVHPDGRKEIVAQIPGGPNGAALGPDGKIYICNNGGFSWIPTGKM IMPGPQPEDYVGGSIQTVDLQSGKVETVVSHCGEHELRGPNDLVFDRHGGLWFSDLGKRRARDMDVGAFYYLKPGMSEIV EAVHGILPANGIGLSPDEKTVYIAETPTARLWAYDVPEPGTVKPRDVIYRGERGRPICGLGGYQMFDSLAVEANGNVCVA TLVSGCISVIAPDGTLVEQVPTGDRVTTNIAFGGPELKTAYITLSGKGELVVMDWPRPGLPLNFLNK
Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 - InterPro: IPR006311 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: =3.1.1.17 [H]
Molecular weight: Translated: 33080; Mature: 32949
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNMRVLATDLEFPEGPVVMPDGSVVLVEIRGRRLTRVHPDGRKEIVAQIPGGPNGAALG CCCCEEEEEECCCCCCCEECCCCCEEEEEECCCEEEEECCCCCEEEEEECCCCCCCCEEC PDGKIYICNNGGFSWIPTGKMIMPGPQPEDYVGGSIQTVDLQSGKVETVVSHCGEHELRG CCCEEEEECCCCEEEECCCCEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCC PNDLVFDRHGGLWFSDLGKRRARDMDVGAFYYLKPGMSEIVEAVHGILPANGIGLSPDEK CCCEEEECCCCEEHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCC TVYIAETPTARLWAYDVPEPGTVKPRDVIYRGERGRPICGLGGYQMFDSLAVEANGNVCV EEEEEECCCCEEEEEECCCCCCCCHHHEEEECCCCCEEECCCCHHHHHEEEEECCCCEEH ATLVSGCISVIAPDGTLVEQVPTGDRVTTNIAFGGPELKTAYITLSGKGELVVMDWPRPG HHHHHHHHEEECCCCCEEEECCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEECCCCC LPLNFLNK CCHHCCCC >Mature Secondary Structure SNMRVLATDLEFPEGPVVMPDGSVVLVEIRGRRLTRVHPDGRKEIVAQIPGGPNGAALG CCCEEEEEECCCCCCCEECCCCCEEEEEECCCEEEEECCCCCEEEEEECCCCCCCCEEC PDGKIYICNNGGFSWIPTGKMIMPGPQPEDYVGGSIQTVDLQSGKVETVVSHCGEHELRG CCCEEEEECCCCEEEECCCCEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCC PNDLVFDRHGGLWFSDLGKRRARDMDVGAFYYLKPGMSEIVEAVHGILPANGIGLSPDEK CCCEEEECCCCEEHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCC TVYIAETPTARLWAYDVPEPGTVKPRDVIYRGERGRPICGLGGYQMFDSLAVEANGNVCV EEEEEECCCCEEEEEECCCCCCCCHHHEEEECCCCCEEECCCCHHHHHEEEEECCCCEEH ATLVSGCISVIAPDGTLVEQVPTGDRVTTNIAFGGPELKTAYITLSGKGELVVMDWPRPG HHHHHHHHEEECCCCCEEEECCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEECCCCC LPLNFLNK CCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1482681 [H]