| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is cyp104 [H]
Identifier: 146342594
GI number: 146342594
Start: 5959751
End: 5960929
Strand: Reverse
Name: cyp104 [H]
Synonym: BRADO5757
Alternate gene names: 146342594
Gene position: 5960929-5959751 (Counterclockwise)
Preceding gene: 146342595
Following gene: 146342591
Centisome position: 79.94
GC content: 67.94
Gene sequence:
>1179_bases GTGAGCACCGCACCCCATTTCGACATCGATCCCGTCACGTTCTGGGCCGATCCCTATCCGGCGCTGGCGCGGATGCGCAA GGAGGCGCCGATCGCGTTCGTGCCGCAGCTCGGCAGCACCTTGCTGTGCCGGCGCGACGACATCTTCGTGTCGGAGAAGC AGATCGAGGTGTTCAGCTCGCACCAGCCGCAGGGGCTGATGAACCGGCTGATGGGCCACAACATGATGCGCAAGGACGGC GAAGCGCATCTGGCCGAGCGCCAGGCGATCGCGCCGGCGGTGTCGCCGCGCGCGGTCCGCGTGCACTGGCTGGCGCAGTT CCAGGCCCATGCCGACCGGCTGATCGACGCGCTCGACCCCGCCGCCGAGGTCGATCTCGTCAGAGATTTCGCGCTGCCGT TCTCGGCCGAGTGCCTGAAGCTGATCACCGGCCTCACCAACATGCGCTTCCAGGACATGAATGCGTGGTCGCAGGCGATG ATCGACGGCATTGCCAACTACACCGGCGATCCCGCGGTCGAGGCGCGCTGCAATGCCGCCACGGCAGGCATCGATGCCGC GATCGACGACATGCTGCCGGTGCTCGAGACGGCGCCCAACCAGAGCCTGCTCGGCGTGATGCTCGCCGCGCAAATGCCGA TGGAGAGCATCCGCGCCAACATCAAGCTCGCGATCTCGGGCGGGCAGAACGAGCCGCGCGATGCGATCGCCGGCACGGTA TGGGCCTTGCTGACGCATCCCGAGCAGCTCGCGCTCGCCAACACGGGAGCGGTGCGCTGGCTGCAGGTGTTCGAGGAATA TGCCCGCTGGATCTCGCCGATCGGCATGTCGCCGCGGCGCATCGCCAAACCCTGGACGATCCGCGACATTGCCTTCGCAC CGGAGGAGCGGGTGTTCCTGATGTTCGGCTCGGCCAACCGCGACGAGGCGCACTTCATCGATCCGGACCGCTTCGACATC CGCCGCGACGTTTCCAAGAGCATCGCGTTCGGCGCCGGCCCGCATTTCTGCGCCGGCGCCTGGGCCTCGCGCGCGATGAT CGCCGACGTCGCCTTGCCGACATTGTTCGCGCGGCTGCAGAACCTGCGGCTGCGTGACGCCGAGCCGGTGCGCATCGGCG GTTGGGCGTTTCGCGGCCTGCTCAACCTGCCGGTGACGTGGGATGCGACACGGCGCTGA
Upstream 100 bases:
>100_bases CTGAACTGAACCCGGCCTTGCAACAAGATGTCACCCATCACCGGGACAGACGCCGCGCGCGCCCGCAGCTAGCCTGCGCC GTCCGATCCGGAGAGAAGGC
Downstream 100 bases:
>100_bases CGGACGAAACGAGCCTTGACAGTCTCTTGGTCACATCGGCGGAATGCAGATCTCCACCGTCATCGTCCGCGCAGGCGGAC GATCCATTACGCCGTGACAT
Product: putative cytochrome P450 monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSTAPHFDIDPVTFWADPYPALARMRKEAPIAFVPQLGSTLLCRRDDIFVSEKQIEVFSSHQPQGLMNRLMGHNMMRKDG EAHLAERQAIAPAVSPRAVRVHWLAQFQAHADRLIDALDPAAEVDLVRDFALPFSAECLKLITGLTNMRFQDMNAWSQAM IDGIANYTGDPAVEARCNAATAGIDAAIDDMLPVLETAPNQSLLGVMLAAQMPMESIRANIKLAISGGQNEPRDAIAGTV WALLTHPEQLALANTGAVRWLQVFEEYARWISPIGMSPRRIAKPWTIRDIAFAPEERVFLMFGSANRDEAHFIDPDRFDI RRDVSKSIAFGAGPHFCAGAWASRAMIADVALPTLFARLQNLRLRDAEPVRIGGWAFRGLLNLPVTWDATRR
Sequences:
>Translated_392_residues MSTAPHFDIDPVTFWADPYPALARMRKEAPIAFVPQLGSTLLCRRDDIFVSEKQIEVFSSHQPQGLMNRLMGHNMMRKDG EAHLAERQAIAPAVSPRAVRVHWLAQFQAHADRLIDALDPAAEVDLVRDFALPFSAECLKLITGLTNMRFQDMNAWSQAM IDGIANYTGDPAVEARCNAATAGIDAAIDDMLPVLETAPNQSLLGVMLAAQMPMESIRANIKLAISGGQNEPRDAIAGTV WALLTHPEQLALANTGAVRWLQVFEEYARWISPIGMSPRRIAKPWTIRDIAFAPEERVFLMFGSANRDEAHFIDPDRFDI RRDVSKSIAFGAGPHFCAGAWASRAMIADVALPTLFARLQNLRLRDAEPVRIGGWAFRGLLNLPVTWDATRR >Mature_391_residues STAPHFDIDPVTFWADPYPALARMRKEAPIAFVPQLGSTLLCRRDDIFVSEKQIEVFSSHQPQGLMNRLMGHNMMRKDGE AHLAERQAIAPAVSPRAVRVHWLAQFQAHADRLIDALDPAAEVDLVRDFALPFSAECLKLITGLTNMRFQDMNAWSQAMI DGIANYTGDPAVEARCNAATAGIDAAIDDMLPVLETAPNQSLLGVMLAAQMPMESIRANIKLAISGGQNEPRDAIAGTVW ALLTHPEQLALANTGAVRWLQVFEEYARWISPIGMSPRRIAKPWTIRDIAFAPEERVFLMFGSANRDEAHFIDPDRFDIR RDVSKSIAFGAGPHFCAGAWASRAMIADVALPTLFARLQNLRLRDAEPVRIGGWAFRGLLNLPVTWDATRR
Specific function: Not essential for virulence, but may be involved in the detoxification of plant protective agents at the site of wounding [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 43486; Mature: 43355
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAPHFDIDPVTFWADPYPALARMRKEAPIAFVPQLGSTLLCRRDDIFVSEKQIEVFSS CCCCCCCCCCCEEEECCCCHHHHHHHHCCCEEEECCCCCEEEEECCCCEECHHHHHHHCC HQPQGLMNRLMGHNMMRKDGEAHLAERQAIAPAVSPRAVRVHWLAQFQAHADRLIDALDP CCCHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCC AAEVDLVRDFALPFSAECLKLITGLTNMRFQDMNAWSQAMIDGIANYTGDPAVEARCNAA HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCHH TAGIDAAIDDMLPVLETAPNQSLLGVMLAAQMPMESIRANIKLAISGGQNEPRDAIAGTV HCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCEEEEEECCCCCCHHHHHHHH WALLTHPEQLALANTGAVRWLQVFEEYARWISPIGMSPRRIAKPWTIRDIAFAPEERVFL HHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEEECCCCEEEE MFGSANRDEAHFIDPDRFDIRRDVSKSIAFGAGPHFCAGAWASRAMIADVALPTLFARLQ EECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NLRLRDAEPVRIGGWAFRGLLNLPVTWDATRR HCCCCCCCCEEECHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure STAPHFDIDPVTFWADPYPALARMRKEAPIAFVPQLGSTLLCRRDDIFVSEKQIEVFSS CCCCCCCCCCEEEECCCCHHHHHHHHCCCEEEECCCCCEEEEECCCCEECHHHHHHHCC HQPQGLMNRLMGHNMMRKDGEAHLAERQAIAPAVSPRAVRVHWLAQFQAHADRLIDALDP CCCHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCC AAEVDLVRDFALPFSAECLKLITGLTNMRFQDMNAWSQAMIDGIANYTGDPAVEARCNAA HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCHH TAGIDAAIDDMLPVLETAPNQSLLGVMLAAQMPMESIRANIKLAISGGQNEPRDAIAGTV HCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCEEEEEECCCCCCHHHHHHHH WALLTHPEQLALANTGAVRWLQVFEEYARWISPIGMSPRRIAKPWTIRDIAFAPEERVFL HHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEEECCCCEEEE MFGSANRDEAHFIDPDRFDIRRDVSKSIAFGAGPHFCAGAWASRAMIADVALPTLFARLQ EECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NLRLRDAEPVRIGGWAFRGLLNLPVTWDATRR HCCCCCCCCEEECHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2708311 [H]