| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is plcN [H]
Identifier: 146342591
GI number: 146342591
Start: 5952667
End: 5954796
Strand: Reverse
Name: plcN [H]
Synonym: BRADO5754
Alternate gene names: 146342591
Gene position: 5954796-5952667 (Counterclockwise)
Preceding gene: 146342594
Following gene: 146342589
Centisome position: 79.86
GC content: 65.07
Gene sequence:
>2130_bases ATGTCGAACACGATCGCGCATAACCGGCGTGAGTTCCTGCGCCTGCTCGGAGCCTCGGCTGCGACGGCTGCGCTCAGCCA GAGCATCGAGCGCGCGCATGCCATTCCGGCGTTTAATCGCCATGGCAGCATCGAGGACGTCAAGCACATCGTCGTGCTGA TGCAGGAGAACCGCGCCTTCGATCATTATTTCGGCGCGATGCGTGGCGTCCGCGGCTTCAACGACCCGCGCGCCGTCAAG CTGCCGAACGGCAATCCGGTCTGGCAGCAGCCGAACGGTTCGGGATCGGTGATGCCGTTCCGTGTCGACAATGCCGGCCA GGTCTATGTCGAGGATGTCGCGCATGGCTGGAACGACGGCCAGAAGTCCTGGAACAACGGCAATTACGACAAGTGGATCG CCAACAAGGGCACCACAACGATGACCTGCATGAACCGGCAGGATCTGCCCTGGCACTACGCGCTCGCCGACGCCTTCACG ATCTGCGACCAGTATTTCTGCTCGGTGATGGGACCGACCGACCCGAACCGCTATTATCTGTGGACCGGCTGGGACGGCAA TGACGGCAAGAACGGCGGCCCGGTCATCACCAACGCCGAGGCCGGCTACGACTGGACCACGTTCCCGGAGCGGCTGGAAA AAGCCGGCATCTCCTGGAAGGTCTATCAGGACATCGGCGTCGGCCTCACCGCTGCAGGCTACTGGGGCTGGACCGAGAAT CCGTGGATCGGCAATTACGGCGACAACTCGCTGCTCTACTTCCACCAGTACCAGAACTCGCAGCCGGGCAGCCCGCTGTA TGAGAAGGCGCTGCGCGGCAGCAACATCGCCAAGGGCGGCACGTTCGAGAACCTGTTCGATGGCCTGCGCAACGACGTCC GCAACGGGACCCTGCCTCAGGTGTCGTGGATCGCGGCTCCGGAAGCGTTCAGCGAGCATCCGAACTGGCTGCCGGGTCCG GGCGCCTGGTACATCTCCAAGGTGCTGGACATCCTGACCTCGAATCCGGAGCTGTGGAGCAAGACCGTTCTGCTCATCAA CTATGACGAGGGTGGCGGCTTCTTCGATCACGTCGTCGGCCCGTATCCGGCGATGTCGCAGGCGTGGGGTCAGTCGACGG TCGACGTCAGCACCGACCTGTTCGCCGGCGACGCCAACCACGTCGCGGGTCCCTATGGCCTCGGCGTGCGCGTGCCGATG ATGGTGGTGTCGCCGTGGTCGCGCGGCGGCTATGTGTGCTCGCAGGTGTTCGACCACACCTCGGTGATCCGCTTCATCGA GCAGCGCTTCCATCGCCACGCGAAGGATCTGTTCGAGACCAATATCCCGGCCTGGCGTCGCGCGGTGTGTGGCGATCTCA CCTCGGCGTTCAACTTCACCTCGCCGAACGAAGGCATGGCGCCGCTGCCGAGCACGGCCGGCTTTAAGCCGCCGGTCGCC GATATCACCTCGGGGGCACGCTTCGACGACTATCATCCGGTGCCGCCGGCCAAGCAGGTCCTGCCGCAGCAGGAGCCCGG CATCCGCCCGGCGCGCGCACTGCCTTACGATCTGCGCGTCGACGGCGATGCCGATGCCTCCAACAAGAAGTTCGGCATCC GCTTCGTCAATCCGGGGCAGGCGGGCGTCTGCTTCCACGTCCGTTCCGGCAACACCGCAACCGGCCCGTGGAGCTACACG GTCGAGGCCGGCAAGTCGCTGAACGGCGTGTGGGACCTCGCGGCCAGCGCCGGCCAGTATGATCTGTCGGTGTACGGCCC GAACGGCTTCTACCGGCACTTCAAGGGCGGCGTCGTCTCGACGGCGGCATTGATCGACGTCGACACCGTGCATCTCTGCG ACCGGGAGGAAGGCGACGACGATCGCAGCCTCGCGATTGCGCTAACCAACAAGGGCGCGGGCTGCGTGGTGACGATCGCC GACAACTACACCGGCCGCAGCGAGCGGCATCGCCTGCAGCGCGGCCAGCGCCTGGAGACGCAGGTTCGCCTGCGCCAGAC CCATGGCTGGTACGACCTGACGGTCACGACCGACACCGATGCCAATTTCAACTGGCAGCTCGCCGGTCATGTCGAGAACG GCCGTCCCAGCATCAGCGATCCCGCGATGGGCAAGATCGCCGCGACCTGA
Upstream 100 bases:
>100_bases TGTCAAACCCGTGCCACACATCCTTAACCGCCCGGTCACGCCCCTGTTAACGCAGCGACCTAAGTCGCTCGACACTGTCA TCACTTGGGGAGTGAGAGAG
Downstream 100 bases:
>100_bases TCGCGGACTTTACCAACGCGATGCGCCCGGAGCGATCCGGGCGCATCGTCAAGACGAAGAGGTGACGAGCGATTGATCGG CGTCGTCGGCGTTGGGATCA
Product: non-hemolytic phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 709; Mature: 708
Protein sequence:
>709_residues MSNTIAHNRREFLRLLGASAATAALSQSIERAHAIPAFNRHGSIEDVKHIVVLMQENRAFDHYFGAMRGVRGFNDPRAVK LPNGNPVWQQPNGSGSVMPFRVDNAGQVYVEDVAHGWNDGQKSWNNGNYDKWIANKGTTTMTCMNRQDLPWHYALADAFT ICDQYFCSVMGPTDPNRYYLWTGWDGNDGKNGGPVITNAEAGYDWTTFPERLEKAGISWKVYQDIGVGLTAAGYWGWTEN PWIGNYGDNSLLYFHQYQNSQPGSPLYEKALRGSNIAKGGTFENLFDGLRNDVRNGTLPQVSWIAAPEAFSEHPNWLPGP GAWYISKVLDILTSNPELWSKTVLLINYDEGGGFFDHVVGPYPAMSQAWGQSTVDVSTDLFAGDANHVAGPYGLGVRVPM MVVSPWSRGGYVCSQVFDHTSVIRFIEQRFHRHAKDLFETNIPAWRRAVCGDLTSAFNFTSPNEGMAPLPSTAGFKPPVA DITSGARFDDYHPVPPAKQVLPQQEPGIRPARALPYDLRVDGDADASNKKFGIRFVNPGQAGVCFHVRSGNTATGPWSYT VEAGKSLNGVWDLAASAGQYDLSVYGPNGFYRHFKGGVVSTAALIDVDTVHLCDREEGDDDRSLAIALTNKGAGCVVTIA DNYTGRSERHRLQRGQRLETQVRLRQTHGWYDLTVTTDTDANFNWQLAGHVENGRPSISDPAMGKIAAT
Sequences:
>Translated_709_residues MSNTIAHNRREFLRLLGASAATAALSQSIERAHAIPAFNRHGSIEDVKHIVVLMQENRAFDHYFGAMRGVRGFNDPRAVK LPNGNPVWQQPNGSGSVMPFRVDNAGQVYVEDVAHGWNDGQKSWNNGNYDKWIANKGTTTMTCMNRQDLPWHYALADAFT ICDQYFCSVMGPTDPNRYYLWTGWDGNDGKNGGPVITNAEAGYDWTTFPERLEKAGISWKVYQDIGVGLTAAGYWGWTEN PWIGNYGDNSLLYFHQYQNSQPGSPLYEKALRGSNIAKGGTFENLFDGLRNDVRNGTLPQVSWIAAPEAFSEHPNWLPGP GAWYISKVLDILTSNPELWSKTVLLINYDEGGGFFDHVVGPYPAMSQAWGQSTVDVSTDLFAGDANHVAGPYGLGVRVPM MVVSPWSRGGYVCSQVFDHTSVIRFIEQRFHRHAKDLFETNIPAWRRAVCGDLTSAFNFTSPNEGMAPLPSTAGFKPPVA DITSGARFDDYHPVPPAKQVLPQQEPGIRPARALPYDLRVDGDADASNKKFGIRFVNPGQAGVCFHVRSGNTATGPWSYT VEAGKSLNGVWDLAASAGQYDLSVYGPNGFYRHFKGGVVSTAALIDVDTVHLCDREEGDDDRSLAIALTNKGAGCVVTIA DNYTGRSERHRLQRGQRLETQVRLRQTHGWYDLTVTTDTDANFNWQLAGHVENGRPSISDPAMGKIAAT >Mature_708_residues SNTIAHNRREFLRLLGASAATAALSQSIERAHAIPAFNRHGSIEDVKHIVVLMQENRAFDHYFGAMRGVRGFNDPRAVKL PNGNPVWQQPNGSGSVMPFRVDNAGQVYVEDVAHGWNDGQKSWNNGNYDKWIANKGTTTMTCMNRQDLPWHYALADAFTI CDQYFCSVMGPTDPNRYYLWTGWDGNDGKNGGPVITNAEAGYDWTTFPERLEKAGISWKVYQDIGVGLTAAGYWGWTENP WIGNYGDNSLLYFHQYQNSQPGSPLYEKALRGSNIAKGGTFENLFDGLRNDVRNGTLPQVSWIAAPEAFSEHPNWLPGPG AWYISKVLDILTSNPELWSKTVLLINYDEGGGFFDHVVGPYPAMSQAWGQSTVDVSTDLFAGDANHVAGPYGLGVRVPMM VVSPWSRGGYVCSQVFDHTSVIRFIEQRFHRHAKDLFETNIPAWRRAVCGDLTSAFNFTSPNEGMAPLPSTAGFKPPVAD ITSGARFDDYHPVPPAKQVLPQQEPGIRPARALPYDLRVDGDADASNKKFGIRFVNPGQAGVCFHVRSGNTATGPWSYTV EAGKSLNGVWDLAASAGQYDLSVYGPNGFYRHFKGGVVSTAALIDVDTVHLCDREEGDDDRSLAIALTNKGAGCVVTIAD NYTGRSERHRLQRGQRLETQVRLRQTHGWYDLTVTTDTDANFNWQLAGHVENGRPSISDPAMGKIAAT
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 78154; Mature: 78022
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTIAHNRREFLRLLGASAATAALSQSIERAHAIPAFNRHGSIEDVKHIVVLMQENRAF CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEEEECCCCH DHYFGAMRGVRGFNDPRAVKLPNGNPVWQQPNGSGSVMPFRVDNAGQVYVEDVAHGWNDG HHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCC QKSWNNGNYDKWIANKGTTTMTCMNRQDLPWHYALADAFTICDQYFCSVMGPTDPNRYYL CCCCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEE WTGWDGNDGKNGGPVITNAEAGYDWTTFPERLEKAGISWKVYQDIGVGLTAAGYWGWTEN EECCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCEEEEECCCCCEEEEEECCCCCC PWIGNYGDNSLLYFHQYQNSQPGSPLYEKALRGSNIAKGGTFENLFDGLRNDVRNGTLPQ CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC VSWIAAPEAFSEHPNWLPGPGAWYISKVLDILTSNPELWSKTVLLINYDEGGGFFDHVVG EEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHCC PYPAMSQAWGQSTVDVSTDLFAGDANHVAGPYGLGVRVPMMVVSPWSRGGYVCSQVFDHT CCCCHHHHCCCCEEECCCCEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHH SVIRFIEQRFHRHAKDLFETNIPAWRRAVCGDLTSAFNFTSPNEGMAPLPSTAGFKPPVA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH DITSGARFDDYHPVPPAKQVLPQQEPGIRPARALPYDLRVDGDADASNKKFGIRFVNPGQ HHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHCCCEEEEECCCCCCCCCEEEEEEECCCC AGVCFHVRSGNTATGPWSYTVEAGKSLNGVWDLAASAGQYDLSVYGPNGFYRHFKGGVVS CEEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHCCCCCEEEEEECCCCHHHHHCCCCEE TAALIDVDTVHLCDREEGDDDRSLAIALTNKGAGCVVTIADNYTGRSERHRLQRGQRLET EEEEEECCEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHCCHHHH QVRLRQTHGWYDLTVTTDTDANFNWQLAGHVENGRPSISDPAMGKIAAT HHHHHHCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCEECC >Mature Secondary Structure SNTIAHNRREFLRLLGASAATAALSQSIERAHAIPAFNRHGSIEDVKHIVVLMQENRAF CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEEEECCCCH DHYFGAMRGVRGFNDPRAVKLPNGNPVWQQPNGSGSVMPFRVDNAGQVYVEDVAHGWNDG HHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCC QKSWNNGNYDKWIANKGTTTMTCMNRQDLPWHYALADAFTICDQYFCSVMGPTDPNRYYL CCCCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEE WTGWDGNDGKNGGPVITNAEAGYDWTTFPERLEKAGISWKVYQDIGVGLTAAGYWGWTEN EECCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCEEEEECCCCCEEEEEECCCCCC PWIGNYGDNSLLYFHQYQNSQPGSPLYEKALRGSNIAKGGTFENLFDGLRNDVRNGTLPQ CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC VSWIAAPEAFSEHPNWLPGPGAWYISKVLDILTSNPELWSKTVLLINYDEGGGFFDHVVG EEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHCC PYPAMSQAWGQSTVDVSTDLFAGDANHVAGPYGLGVRVPMMVVSPWSRGGYVCSQVFDHT CCCCHHHHCCCCEEECCCCEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHH SVIRFIEQRFHRHAKDLFETNIPAWRRAVCGDLTSAFNFTSPNEGMAPLPSTAGFKPPVA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH DITSGARFDDYHPVPPAKQVLPQQEPGIRPARALPYDLRVDGDADASNKKFGIRFVNPGQ HHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHCCCEEEEECCCCCCCCCEEEEEEECCCC AGVCFHVRSGNTATGPWSYTVEAGKSLNGVWDLAASAGQYDLSVYGPNGFYRHFKGGVVS CEEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHCCCCCEEEEEECCCCHHHHHCCCCEE TAALIDVDTVHLCDREEGDDDRSLAIALTNKGAGCVVTIADNYTGRSERHRLQRGQRLET EEEEEECCEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHCCHHHH QVRLRQTHGWYDLTVTTDTDANFNWQLAGHVENGRPSISDPAMGKIAAT HHHHHHCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10523590 [H]