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The map label for this gene is yagT [H]

Identifier: 146342529

GI number: 146342529

Start: 5893508

End: 5894032

Strand: Reverse

Name: yagT [H]

Synonym: BRADO5691

Alternate gene names: 146342529

Gene position: 5894032-5893508 (Counterclockwise)

Preceding gene: 146342530

Following gene: 146342528

Centisome position: 79.04

GC content: 64.76

Gene sequence:

>525_bases
ATGAGCCAGTCGCGCGAGAGTGCCGCATCTCTCACCAAACCTGCCCCGCTGTCCGTCAGCTTGCGGATCAATGGCGAAAG
CCGCACGCTATCGGTCGCGCCCTGGACGACGCTGCTCGACCTCCTGCGCAATCATCTCGACCTCACCGGCACCAAGAAGG
GCTGCGACCACGGCCAGTGCGGCGCCTGCACGGTGCTGATCGATGGCCGCCGCGCGCTGTCCTGTCTGACGCTCGCCGTG
ATGAAGGACGGTGCCGAGATCACCACCATCGAAGGCCTCGCCAAGGGCGATGAACTGCATCCGCTGCAGCAGGCGTTCAT
CGATCACGATGCTTTTCAATGCGGCTATTGCACGCCCGGCCAGATCTGCTCGGCCGCCGGCCTGATCGCCGAGGGCAGGG
CGAAGACCAAGGATGAGATCCGCGAGCTGATGAGCGGCAACATCTGCCGCTGCGGCGCCTATCCGAACATCGTCGGCGCC
ATCGAGCAGGCGATGACCAAACAGGCCATGGGAGGCGGCCAATGA

Upstream 100 bases:

>100_bases
CGCGGGCCTTGGCCATGCCCGTCGTCCGCCGCGCGAAAAATTGTTGAGAACTATTCGCGCCATTGCGTGTTGATGCGGGT
CCGTCAACGGAGACCCCCGC

Downstream 100 bases:

>100_bases
ACAGCTTTGACTACGCACGCGCCTGCGACGTTGCGGAGGCGGTCAGGCTGAAGGCGGGAGCACCCGACGCGAGATTCATC
GCCGGCGGCACCAACCTGAT

Product: putative xanthine dehydrogenase YagT-like, iron-sulfur binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSQSRESAASLTKPAPLSVSLRINGESRTLSVAPWTTLLDLLRNHLDLTGTKKGCDHGQCGACTVLIDGRRALSCLTLAV
MKDGAEITTIEGLAKGDELHPLQQAFIDHDAFQCGYCTPGQICSAAGLIAEGRAKTKDEIRELMSGNICRCGAYPNIVGA
IEQAMTKQAMGGGQ

Sequences:

>Translated_174_residues
MSQSRESAASLTKPAPLSVSLRINGESRTLSVAPWTTLLDLLRNHLDLTGTKKGCDHGQCGACTVLIDGRRALSCLTLAV
MKDGAEITTIEGLAKGDELHPLQQAFIDHDAFQCGYCTPGQICSAAGLIAEGRAKTKDEIRELMSGNICRCGAYPNIVGA
IEQAMTKQAMGGGQ
>Mature_173_residues
SQSRESAASLTKPAPLSVSLRINGESRTLSVAPWTTLLDLLRNHLDLTGTKKGCDHGQCGACTVLIDGRRALSCLTLAVM
KDGAEITTIEGLAKGDELHPLQQAFIDHDAFQCGYCTPGQICSAAGLIAEGRAKTKDEIRELMSGNICRCGAYPNIVGAI
EQAMTKQAMGGGQ

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=136, Percent_Identity=37.5, Blast_Score=67, Evalue=6e-12,
Organism=Escherichia coli, GI1786480, Length=168, Percent_Identity=59.5238095238095, Blast_Score=198, Evalue=1e-52,
Organism=Escherichia coli, GI1789232, Length=147, Percent_Identity=45.578231292517, Blast_Score=119, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI17539860, Length=157, Percent_Identity=33.1210191082803, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32566215, Length=158, Percent_Identity=33.5443037974684, Blast_Score=90, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17540638, Length=155, Percent_Identity=35.4838709677419, Blast_Score=87, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24647197, Length=163, Percent_Identity=36.8098159509202, Blast_Score=100, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24647195, Length=163, Percent_Identity=36.8098159509202, Blast_Score=95, Evalue=2e-20,
Organism=Drosophila melanogaster, GI17737937, Length=164, Percent_Identity=35.3658536585366, Blast_Score=90, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24647199, Length=155, Percent_Identity=35.4838709677419, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24647201, Length=158, Percent_Identity=35.4430379746835, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24647193, Length=157, Percent_Identity=36.3057324840764, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 18376; Mature: 18245

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSRESAASLTKPAPLSVSLRINGESRTLSVAPWTTLLDLLRNHLDLTGTKKGCDHGQC
CCCCHHHHHHCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC
GACTVLIDGRRALSCLTLAVMKDGAEITTIEGLAKGDELHPLQQAFIDHDAFQCGYCTPG
CEEEEEECCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCHHHHHHHCCCCCCCCCCCHH
QICSAAGLIAEGRAKTKDEIRELMSGNICRCGAYPNIVGAIEQAMTKQAMGGGQ
HHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SQSRESAASLTKPAPLSVSLRINGESRTLSVAPWTTLLDLLRNHLDLTGTKKGCDHGQC
CCCHHHHHHCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC
GACTVLIDGRRALSCLTLAVMKDGAEITTIEGLAKGDELHPLQQAFIDHDAFQCGYCTPG
CEEEEEECCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCHHHHHHHCCCCCCCCCCCHH
QICSAAGLIAEGRAKTKDEIRELMSGNICRCGAYPNIVGAIEQAMTKQAMGGGQ
HHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]