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The map label for this gene is ytlD [H]

Identifier: 146342221

GI number: 146342221

Start: 5579294

End: 5580145

Strand: Reverse

Name: ytlD [H]

Synonym: BRADO5373

Alternate gene names: 146342221

Gene position: 5580145-5579294 (Counterclockwise)

Preceding gene: 146342222

Following gene: 146342220

Centisome position: 74.84

GC content: 64.2

Gene sequence:

>852_bases
ATGACCGCGGAGATCGACGTGACGCCGGCCGCTGCCAAGGGATTGAGCGATCGCGCTGCACCGGCAGGGCGGCGTTGGCT
GCGTCTGCGCAACACGCTCGGAGTGCTCGCGACCCAGCTCGTCGTGCTCGCGGCCTTCCTGGCGTTCTGGGAGTACGCGA
CGGGCCAGAACAAGGCGGCGGCCTTCATGTTCGGCTCGCCCTCGGCGATCTTCAAGTTCCTGTCGCAGATGGCTTACGAT
GGAAGCCTCTGGCGCGACACGTATGTCACGGGCCTCGAGACGCTGCTCGGCTTCTTCGTCGGCAACTGCACCGGCACCTT
GATCGGGCTGTCGCTGTGGTATTCACGTTTCGTCTCGCGCGTGGTCGAGCCGTTCGTCATCGCGCTCGGCTCGATCCCGA
TTATCGCGCTGGCGCCGATCATCATCATCTGGTTCGGCACCGGCCTGATTTCGAAGGTCGCGATGTCAACCCTGTCGGTC
GTGATCGTGGCGCTGGTGACCTCCTACAAGGGCGCGACCGGGGTCGACCCCGACCAGATCAACCTGCTGCGCACGCTCGG
CGCCTCGAAGTTCCAGATCTTTCGCAAGCTGGTCGTGCCGGCGTCGCTGACCGACATCTTCGCAGGACTGAAGCTCACGG
TCGGCTTCGCGCTGATCGGCGCCATCGTCGGTGAGTTCATGTCGTCATCCGAGGGCCTGGGGCACGCGATCTTCAAGGCC
GGCTCGTTGTACATCATTCCGAAGGTCTTCGCCGCGCTGGTCGCCACCATCGCGCTGGCCCTGGTCCTGACCTTTGCCGT
TGGCAAGATCGAGCAGCTTCTGATGCCATGGCGACGGCAGCTGCAACGATGA

Upstream 100 bases:

>100_bases
CGCTCGGCGCCGATCGCCGCGACGTGATCTCGGTCCGGCAGGCGCCGGGCTTCAGCGATTATGTCCGCAGCATCTGGGCT
GATCTCGACGTGGTGCTGCA

Downstream 100 bases:

>100_bases
GGCGGGATTCTCCGATCATGCATCACCAGAAACGAAACGGCGGACAAAACAGGGAGTGATCATGTCAAAGCGCGTCAGCA
AGGCGGGCAACATCAAATAC

Product: putative ABC transporter permease

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTAEIDVTPAAAKGLSDRAAPAGRRWLRLRNTLGVLATQLVVLAAFLAFWEYATGQNKAAAFMFGSPSAIFKFLSQMAYD
GSLWRDTYVTGLETLLGFFVGNCTGTLIGLSLWYSRFVSRVVEPFVIALGSIPIIALAPIIIIWFGTGLISKVAMSTLSV
VIVALVTSYKGATGVDPDQINLLRTLGASKFQIFRKLVVPASLTDIFAGLKLTVGFALIGAIVGEFMSSSEGLGHAIFKA
GSLYIIPKVFAALVATIALALVLTFAVGKIEQLLMPWRRQLQR

Sequences:

>Translated_283_residues
MTAEIDVTPAAAKGLSDRAAPAGRRWLRLRNTLGVLATQLVVLAAFLAFWEYATGQNKAAAFMFGSPSAIFKFLSQMAYD
GSLWRDTYVTGLETLLGFFVGNCTGTLIGLSLWYSRFVSRVVEPFVIALGSIPIIALAPIIIIWFGTGLISKVAMSTLSV
VIVALVTSYKGATGVDPDQINLLRTLGASKFQIFRKLVVPASLTDIFAGLKLTVGFALIGAIVGEFMSSSEGLGHAIFKA
GSLYIIPKVFAALVATIALALVLTFAVGKIEQLLMPWRRQLQR
>Mature_282_residues
TAEIDVTPAAAKGLSDRAAPAGRRWLRLRNTLGVLATQLVVLAAFLAFWEYATGQNKAAAFMFGSPSAIFKFLSQMAYDG
SLWRDTYVTGLETLLGFFVGNCTGTLIGLSLWYSRFVSRVVEPFVIALGSIPIIALAPIIIIWFGTGLISKVAMSTLSVV
IVALVTSYKGATGVDPDQINLLRTLGASKFQIFRKLVVPASLTDIFAGLKLTVGFALIGAIVGEFMSSSEGLGHAIFKAG
SLYIIPKVFAALVATIALALVLTFAVGKIEQLLMPWRRQLQR

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=265, Percent_Identity=24.5283018867925, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI87081802, Length=232, Percent_Identity=22.8448275862069, Blast_Score=78, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30383; Mature: 30252

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEIDVTPAAAKGLSDRAAPAGRRWLRLRNTLGVLATQLVVLAAFLAFWEYATGQNKAA
CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
AFMFGSPSAIFKFLSQMAYDGSLWRDTYVTGLETLLGFFVGNCTGTLIGLSLWYSRFVSR
EEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVEPFVIALGSIPIIALAPIIIIWFGTGLISKVAMSTLSVVIVALVTSYKGATGVDPDQI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
NLLRTLGASKFQIFRKLVVPASLTDIFAGLKLTVGFALIGAIVGEFMSSSEGLGHAIFKA
HHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC
GSLYIIPKVFAALVATIALALVLTFAVGKIEQLLMPWRRQLQR
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAEIDVTPAAAKGLSDRAAPAGRRWLRLRNTLGVLATQLVVLAAFLAFWEYATGQNKAA
CCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
AFMFGSPSAIFKFLSQMAYDGSLWRDTYVTGLETLLGFFVGNCTGTLIGLSLWYSRFVSR
EEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVEPFVIALGSIPIIALAPIIIIWFGTGLISKVAMSTLSVVIVALVTSYKGATGVDPDQI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
NLLRTLGASKFQIFRKLVVPASLTDIFAGLKLTVGFALIGAIVGEFMSSSEGLGHAIFKA
HHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC
GSLYIIPKVFAALVATIALALVLTFAVGKIEQLLMPWRRQLQR
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]