| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342220
Identifier: 146342220
GI number: 146342220
Start: 5578309
End: 5579232
Strand: Reverse
Name: 146342220
Synonym: BRADO5372
Alternate gene names: NA
Gene position: 5579232-5578309 (Counterclockwise)
Preceding gene: 146342221
Following gene: 146342219
Centisome position: 74.82
GC content: 62.77
Gene sequence:
>924_bases ATGTCAAAGCGCGTCAGCAAGGCGGGCAACATCAAATACGCGCTCTCCGGCGATGATAAGTTCATCGCGTCAGTGGAGCC CGGTGAGATCTTCGTCGTCGAATGCGCGATCAACGTCAATGACGGCACCATTCGGGCACTCGGCCAGCAACTGGTCGAAA GCGACGTGACGCTGCCTTACGTCAACGGTGCGACCGGTCCGATCGAGGTGCGCGGTGCCAAGGCCGGCGACATGCTGCGG CTCGACATCATCGACATGGAGCTCGACCGCCTCGGATTCACGGCACTATGGCCCGGCATCGGCATGTTCCCCGACTGGGT TCGGCGCAAGGAGTTCGGCATCCAGACCCGTGTCGTCGCCGTCGAGAACGGTCAGGTGCTGTGGAACGAGCATGTGAAGC TGCCGGTGCGGCCGATGATTGGCGTCGCTGGCGTGGCGCCGGTCCATGGAGCGGTGCTGACGGTCGACAACGGCCCGCAT GGCGGCAATCTCGATGTGCAGGAGATCACGTCGGGCAATTCGGTGTTCTTCCGCGTCAACAAGGATGGCGCGCATCTTTT CCTCGGCGACTGCCACGCCATCCAGGGCGATGGCGAGGCCAACGGCATGGGCGCGATCGAGATCGCGGCGAACCTCACCG TCAAGGTCTCGCTCGACAAGGCACCGGCGCGGCTGAACCATCCGCGTATCGAGACACCGACGCATATCTGCACGCTCGGC TGTGCGCGCCCCCTGGAGGATGCGATGCGGATCGCGTTCGAGGAGATGATCAACTGGCTCGAGGATGATTGGAAGATCCC GGCAGCGGAGGCCTATATGCTGCTCGGCCAGGTCGCCGAGGCGCGCTGTACCCAGGTGGTCAATCCGAAATACACCTACA TCTGCAAGGTCAACAAGACCTTGCTCGCCGGCTATCACGGCTGA
Upstream 100 bases:
>100_bases CAGCTTCTGATGCCATGGCGACGGCAGCTGCAACGATGAGGCGGGATTCTCCGATCATGCATCACCAGAAACGAAACGGC GGACAAAACAGGGAGTGATC
Downstream 100 bases:
>100_bases GGCCGTTCACTCGAGACGAAGGAGGACATCATGGATCTGGGATTGGCGGGCAAGAGCGTGCTGATCACGGGCGGTAGCAA GGGTATCGGACTCGCGATCG
Product: putative acetamidase/formamidase
Products: formate; NH3
Alternate protein names: Acetamidase/Formamidase Family Protein; Formamidase; Acetamidase; Amidase; Acetamidase/Formamidase Protein; Amidase-Related Protein; Acetamidase/Formamidase Family; Amidae; Transcriptional Regulatory Protein
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSKRVSKAGNIKYALSGDDKFIASVEPGEIFVVECAINVNDGTIRALGQQLVESDVTLPYVNGATGPIEVRGAKAGDMLR LDIIDMELDRLGFTALWPGIGMFPDWVRRKEFGIQTRVVAVENGQVLWNEHVKLPVRPMIGVAGVAPVHGAVLTVDNGPH GGNLDVQEITSGNSVFFRVNKDGAHLFLGDCHAIQGDGEANGMGAIEIAANLTVKVSLDKAPARLNHPRIETPTHICTLG CARPLEDAMRIAFEEMINWLEDDWKIPAAEAYMLLGQVAEARCTQVVNPKYTYICKVNKTLLAGYHG
Sequences:
>Translated_307_residues MSKRVSKAGNIKYALSGDDKFIASVEPGEIFVVECAINVNDGTIRALGQQLVESDVTLPYVNGATGPIEVRGAKAGDMLR LDIIDMELDRLGFTALWPGIGMFPDWVRRKEFGIQTRVVAVENGQVLWNEHVKLPVRPMIGVAGVAPVHGAVLTVDNGPH GGNLDVQEITSGNSVFFRVNKDGAHLFLGDCHAIQGDGEANGMGAIEIAANLTVKVSLDKAPARLNHPRIETPTHICTLG CARPLEDAMRIAFEEMINWLEDDWKIPAAEAYMLLGQVAEARCTQVVNPKYTYICKVNKTLLAGYHG >Mature_306_residues SKRVSKAGNIKYALSGDDKFIASVEPGEIFVVECAINVNDGTIRALGQQLVESDVTLPYVNGATGPIEVRGAKAGDMLRL DIIDMELDRLGFTALWPGIGMFPDWVRRKEFGIQTRVVAVENGQVLWNEHVKLPVRPMIGVAGVAPVHGAVLTVDNGPHG GNLDVQEITSGNSVFFRVNKDGAHLFLGDCHAIQGDGEANGMGAIEIAANLTVKVSLDKAPARLNHPRIETPTHICTLGC ARPLEDAMRIAFEEMINWLEDDWKIPAAEAYMLLGQVAEARCTQVVNPKYTYICKVNKTLLAGYHG
Specific function: Unknown
COG id: COG2421
COG function: function code C; Predicted acetamidase/formamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.1.49
Molecular weight: Translated: 33312; Mature: 33181
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRVSKAGNIKYALSGDDKFIASVEPGEIFVVECAINVNDGTIRALGQQLVESDVTLPY CCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCEEE VNGATGPIEVRGAKAGDMLRLDIIDMELDRLGFTALWPGIGMFPDWVRRKEFGIQTRVVA ECCCCCCEEEECCCCCCEEEEEEEEEEHHHCCCEEECCCCCCCHHHHHHHHCCCEEEEEE VENGQVLWNEHVKLPVRPMIGVAGVAPVHGAVLTVDNGPHGGNLDVQEITSGNSVFFRVN EECCEEEEECCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEHHEECCCCEEEEEEC KDGAHLFLGDCHAIQGDGEANGMGAIEIAANLTVKVSLDKAPARLNHPRIETPTHICTLG CCCCEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEC CARPLEDAMRIAFEEMINWLEDDWKIPAAEAYMLLGQVAEARCTQVVNPKYTYICKVNKT CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCE LLAGYHG EEEECCC >Mature Secondary Structure SKRVSKAGNIKYALSGDDKFIASVEPGEIFVVECAINVNDGTIRALGQQLVESDVTLPY CCCCCCCCCEEEEECCCCEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCEEE VNGATGPIEVRGAKAGDMLRLDIIDMELDRLGFTALWPGIGMFPDWVRRKEFGIQTRVVA ECCCCCCEEEECCCCCCEEEEEEEEEEHHHCCCEEECCCCCCCHHHHHHHHCCCEEEEEE VENGQVLWNEHVKLPVRPMIGVAGVAPVHGAVLTVDNGPHGGNLDVQEITSGNSVFFRVN EECCEEEEECCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEHHEECCCCEEEEEEC KDGAHLFLGDCHAIQGDGEANGMGAIEIAANLTVKVSLDKAPARLNHPRIETPTHICTLG CCCCEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEC CARPLEDAMRIAFEEMINWLEDDWKIPAAEAYMLLGQVAEARCTQVVNPKYTYICKVNKT CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCE LLAGYHG EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formamide; H2O
Specific reaction: formamide + H2O = formate + NH3
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA