| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342141
Identifier: 146342141
GI number: 146342141
Start: 5501366
End: 5502103
Strand: Reverse
Name: 146342141
Synonym: BRADO5288
Alternate gene names: NA
Gene position: 5502103-5501366 (Counterclockwise)
Preceding gene: 146342142
Following gene: 146342140
Centisome position: 73.79
GC content: 66.8
Gene sequence:
>738_bases ATGACCTCGCTGCGCCGACGTCGCCACCAGAACGGCCCCCGCAACGCGGGGGTCGTGCTGCTGCATGGCATCGCCGGCCG CTCATTGATGCTGCGTCCGCTGGAAAAGCGGCTGCAGCTGGCGGGCTTCGCCACGCTGAACCTGGACTATGAGAGCCGCA AGAAGCCGCTCGAGCAGTTGGCCGAGGATATCCATCCGGCCATCGCGGAGTTCGCGGCCGGCATCGACGGTCCGATCCAC TTCGTCACCCATTCGATGGGCGGGCTGCTCGCGCGCGTCACCATTGCCAAGCATCGTCCGCCGCGTCTCGGTCGCGTCGT CATGCTCGGCACGCCCAATGGCGGCAGCGAGATTGCGGACCGGCTGCAGAATGTCGGGCTGTACCGCACCTATTTCGGGC CAGCCGGTCTGCAACTGGTCACGACCAAGCATGATACGCTCGCCGCCTTGCCACCGGCCGATTACGAGATCGGCGTGATC GCTGGAAACCGTTTCCTCGATCCGATTTCCGGCCTGTTCCTGCTGCCCTGGCCGAATGACGGCCGCGTCTCGGTCGAGAG CTGCAAGCTCGCCGAGATGACGGACTCCACGGTGATCAAGGCCTCGCATATGGGCCTCCTGGTGCACCCGGCCTCGTTCC GGCAGACCATCGCGTTTCTCCGCGACGGCCAGTTCGAGCCTGCGCGCCCGCTGCTGCGTGGCGTCATCGCCGAGATCGGC CGCCGCGCGGCCTCCTGA
Upstream 100 bases:
>100_bases GCTCCGGCAAGACCGACTATGTCGGTGCGAAGGCGCTGGCCGAGGAGAATGCGAAAGCAGTCGCTCCAGAGCGCGAGACG GAGGAGCGGGAAGTCGCGTG
Downstream 100 bases:
>100_bases CGCAAGTTTTCCTTGCCGTCCGCGGCTATCCCGCGACAATCCCGCACTCGACATCCATCGACAGGCGAAGCCATGACCAA CGACAGCGTGATTCTCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase Or Hydrolase; Acetyltransferase/Hydrolase; PGAP1 Family Protein; Pgap1 Family Protein; Alpha/Beta Hydrolase; Cob(I)Alamin Adenosyltransferase; Cob(I)Yrinic Acid A C-Diamide Adenosyltransferase; Alpha/Beta Fold Superfamily Hydrolase/Acyltransferase; Lipase B; Alpha/Beta Family Hydrolase; Lipase LipB
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTSLRRRRHQNGPRNAGVVLLHGIAGRSLMLRPLEKRLQLAGFATLNLDYESRKKPLEQLAEDIHPAIAEFAAGIDGPIH FVTHSMGGLLARVTIAKHRPPRLGRVVMLGTPNGGSEIADRLQNVGLYRTYFGPAGLQLVTTKHDTLAALPPADYEIGVI AGNRFLDPISGLFLLPWPNDGRVSVESCKLAEMTDSTVIKASHMGLLVHPASFRQTIAFLRDGQFEPARPLLRGVIAEIG RRAAS
Sequences:
>Translated_245_residues MTSLRRRRHQNGPRNAGVVLLHGIAGRSLMLRPLEKRLQLAGFATLNLDYESRKKPLEQLAEDIHPAIAEFAAGIDGPIH FVTHSMGGLLARVTIAKHRPPRLGRVVMLGTPNGGSEIADRLQNVGLYRTYFGPAGLQLVTTKHDTLAALPPADYEIGVI AGNRFLDPISGLFLLPWPNDGRVSVESCKLAEMTDSTVIKASHMGLLVHPASFRQTIAFLRDGQFEPARPLLRGVIAEIG RRAAS >Mature_244_residues TSLRRRRHQNGPRNAGVVLLHGIAGRSLMLRPLEKRLQLAGFATLNLDYESRKKPLEQLAEDIHPAIAEFAAGIDGPIHF VTHSMGGLLARVTIAKHRPPRLGRVVMLGTPNGGSEIADRLQNVGLYRTYFGPAGLQLVTTKHDTLAALPPADYEIGVIA GNRFLDPISGLFLLPWPNDGRVSVESCKLAEMTDSTVIKASHMGLLVHPASFRQTIAFLRDGQFEPARPLLRGVIAEIGR RAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26711; Mature: 26580
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLRRRRHQNGPRNAGVVLLHGIAGRSLMLRPLEKRLQLAGFATLNLDYESRKKPLEQL CCCHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHH AEDIHPAIAEFAAGIDGPIHFVTHSMGGLLARVTIAKHRPPRLGRVVMLGTPNGGSEIAD HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEHHCCCCCCCCEEEEEECCCCHHHHHH RLQNVGLYRTYFGPAGLQLVTTKHDTLAALPPADYEIGVIAGNRFLDPISGLFLLPWPND HHHHCCEEEEECCCCCEEEEEECCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCC GRVSVESCKLAEMTDSTVIKASHMGLLVHPASFRQTIAFLRDGQFEPARPLLRGVIAEIG CCEECCCCCHHHCCCCEEEEEECCEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RRAAS HHCCC >Mature Secondary Structure TSLRRRRHQNGPRNAGVVLLHGIAGRSLMLRPLEKRLQLAGFATLNLDYESRKKPLEQL CCHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHH AEDIHPAIAEFAAGIDGPIHFVTHSMGGLLARVTIAKHRPPRLGRVVMLGTPNGGSEIAD HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEHHCCCCCCCCEEEEEECCCCHHHHHH RLQNVGLYRTYFGPAGLQLVTTKHDTLAALPPADYEIGVIAGNRFLDPISGLFLLPWPND HHHHCCEEEEECCCCCEEEEEECCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCC GRVSVESCKLAEMTDSTVIKASHMGLLVHPASFRQTIAFLRDGQFEPARPLLRGVIAEIG CCEECCCCCHHHCCCCEEEEEECCEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RRAAS HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA