| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yflN [H]
Identifier: 146342135
GI number: 146342135
Start: 5495209
End: 5496069
Strand: Direct
Name: yflN [H]
Synonym: BRADO5282
Alternate gene names: 146342135
Gene position: 5495209-5496069 (Clockwise)
Preceding gene: 146342134
Following gene: 146342136
Centisome position: 73.7
GC content: 68.87
Gene sequence:
>861_bases ATGACCCAGATTCCGTTGCCGGCATCGGCGCTGGCCGAGAACCATGAGGCCGATGCGGCGCGCGACGACGGCGTCCGCGA GATCGCGCCTGATCTTGCCTATCGCCAGCTCGCGATCGTCAATGTCGTATTCTATGGCCGGCCCGGCGCTGGAGACGGCG GATGGGTGCTGATCGATGCCGGCATGTTCGGCTCCGGCCCCGCGATCCGCCATGCCGCGCAGGCGCGGTTCGGCGGCAGC GGACGCCCCGCCTGCATCATCCTCACGCATGGCCATTTCGACCATGTCGGTGTGCTCGAAGACTTGAGCCGCGCGTGGGA CGTGCCGGTCTATGCGCACCCGCTGGAGCACCCCTATCTGAACGGCACGCGCTCCTACCCGCCGCCCGATCCCCATGTCG GCGGCGGCATGCTCGCGACGCTGTCGCCGCTGTTCCCGACCAGCCCGGTCGATGTCGGCACTCAGCTGCGCGAGCTGCCG GCGGATCACTCCGTCCCGTTCATGCCGGACTTCAGATGGATCCATACGCCGGGCCACGCGCCCGGCCACGTCTCGCTATG GCGCGAGCACGACCGCCTGCTGATCGCAGGGGACGCCATCGTCACCACGGCCCAGGAATCCGTCTATGCCTCGGTCACCC AGGCACCCGAGATGCACGGACCGCCGATGTACTTCACCCCGGACTGGGCGGCCGCGCGCGATTCCGTTCGCGCCATCGAC GCGTTGTCGCCCGAGATGGCGATCACCGGCCATGGCGCTGCCATGCGCGGCCAGGAGATGAAGCAGGCATTGGCCGAGCT GGCACGGGACTTCGACAGCGTCGCTGTTCCCGAGGACAGGCGCGGCACGCAACCGGGCTGA
Upstream 100 bases:
>100_bases CGAGGCCGCCGGCCTCAAGGCGAACGCGGGCTGAACGCCCGCTTAGCAACCTTTCGATCCGCTGCGGCTTCCTTGGTTGA TCTGAACTGAGGGAGCTCGC
Downstream 100 bases:
>100_bases GCCAGGCTGCGGGATCTTACCAAGCTTTCATCGGCGCGGCTCTTCGCGCCCGAAACATTGCCGCGGGCTGCACGTTTGTA CGACGGGGCGCGTGGAGAAC
Product: putative metallo-hydrolase/oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTQIPLPASALAENHEADAARDDGVREIAPDLAYRQLAIVNVVFYGRPGAGDGGWVLIDAGMFGSGPAIRHAAQARFGGS GRPACIILTHGHFDHVGVLEDLSRAWDVPVYAHPLEHPYLNGTRSYPPPDPHVGGGMLATLSPLFPTSPVDVGTQLRELP ADHSVPFMPDFRWIHTPGHAPGHVSLWREHDRLLIAGDAIVTTAQESVYASVTQAPEMHGPPMYFTPDWAAARDSVRAID ALSPEMAITGHGAAMRGQEMKQALAELARDFDSVAVPEDRRGTQPG
Sequences:
>Translated_286_residues MTQIPLPASALAENHEADAARDDGVREIAPDLAYRQLAIVNVVFYGRPGAGDGGWVLIDAGMFGSGPAIRHAAQARFGGS GRPACIILTHGHFDHVGVLEDLSRAWDVPVYAHPLEHPYLNGTRSYPPPDPHVGGGMLATLSPLFPTSPVDVGTQLRELP ADHSVPFMPDFRWIHTPGHAPGHVSLWREHDRLLIAGDAIVTTAQESVYASVTQAPEMHGPPMYFTPDWAAARDSVRAID ALSPEMAITGHGAAMRGQEMKQALAELARDFDSVAVPEDRRGTQPG >Mature_285_residues TQIPLPASALAENHEADAARDDGVREIAPDLAYRQLAIVNVVFYGRPGAGDGGWVLIDAGMFGSGPAIRHAAQARFGGSG RPACIILTHGHFDHVGVLEDLSRAWDVPVYAHPLEHPYLNGTRSYPPPDPHVGGGMLATLSPLFPTSPVDVGTQLRELPA DHSVPFMPDFRWIHTPGHAPGHVSLWREHDRLLIAGDAIVTTAQESVYASVTQAPEMHGPPMYFTPDWAAARDSVRAIDA LSPEMAITGHGAAMRGQEMKQALAELARDFDSVAVPEDRRGTQPG
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 30712; Mature: 30581
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIPLPASALAENHEADAARDDGVREIAPDLAYRQLAIVNVVFYGRPGAGDGGWVLIDA CCCCCCCHHHHHCCCCCCCHHCCCHHHHHHHHHHHHEEEEEEEEECCCCCCCCCEEEEEC GMFGSGPAIRHAAQARFGGSGRPACIILTHGHFDHVGVLEDLSRAWDVPVYAHPLEHPYL CCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCCC NGTRSYPPPDPHVGGGMLATLSPLFPTSPVDVGTQLRELPADHSVPFMPDFRWIHTPGHA CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCC PGHVSLWREHDRLLIAGDAIVTTAQESVYASVTQAPEMHGPPMYFTPDWAAARDSVRAID CCCEEEEECCCCEEEECCEEEEHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHH ALSPEMAITGHGAAMRGQEMKQALAELARDFDSVAVPEDRRGTQPG HCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TQIPLPASALAENHEADAARDDGVREIAPDLAYRQLAIVNVVFYGRPGAGDGGWVLIDA CCCCCCHHHHHCCCCCCCHHCCCHHHHHHHHHHHHEEEEEEEEECCCCCCCCCEEEEEC GMFGSGPAIRHAAQARFGGSGRPACIILTHGHFDHVGVLEDLSRAWDVPVYAHPLEHPYL CCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCCC NGTRSYPPPDPHVGGGMLATLSPLFPTSPVDVGTQLRELPADHSVPFMPDFRWIHTPGHA CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCC PGHVSLWREHDRLLIAGDAIVTTAQESVYASVTQAPEMHGPPMYFTPDWAAARDSVRAID CCCEEEEECCCCEEEECCEEEEHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHH ALSPEMAITGHGAAMRGQEMKQALAELARDFDSVAVPEDRRGTQPG HCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377; 10972810; 11029430 [H]