| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342128
Identifier: 146342128
GI number: 146342128
Start: 5486064
End: 5487050
Strand: Reverse
Name: 146342128
Synonym: BRADO5275
Alternate gene names: NA
Gene position: 5487050-5486064 (Counterclockwise)
Preceding gene: 146342129
Following gene: 146342127
Centisome position: 73.59
GC content: 61.7
Gene sequence:
>987_bases GTGCGTAACCTGATCAAGATCGCGGCCACCACCGTGGCCCTTTTCGCAACCGCGCCGGCCTTCGCCGGATGGGAGCCGAC CAAGCCGGTCGAGATCGTCGTCGCTGCCGGCGCCGGCGGTGCATCCGACCAGATGGCGCGCATGATGCAGGCCGCGATCC AGAAGAACAATCTGCTGAAGCAGCCGGTCGTCGTGTCGCTGAAGGGCGGCGCATCGGGCGCCGAGGCGCTGATGTACATG AAGTCCAGCGATGGCGATCCGAACAAGATCCTGATCGCCTATTCGCTGATCTATATGCTGCCGCTGTCCGCCAAGCTGCC GTTCGACTGGAAAGAGCTGTCGCCGGTCGCGGTGATTGCGCTCGATCAGTTCGTGCTGTGGGACAACGTCAACGGCCCGA AGACGGTGAAGGAATTCATCGACGCCGCCAAGGCGTCGAGCTCTCCGTTCAAGATGGGCGGCACCGGCTCCAAGCGCGAG GATCACGTGCTCACGGTGTTCGTCGAGAAGAAGACCGGCGCGAAGTTCTCCTATTTGCCCTACAAATCGGGCGGCGAGGC CGCAACCCAACTCGTCGGCGGCCACACCGAATCCAACGTCAACAACCCCTCGGAAAATCTCGAAGTCTGGCGCGCCGGAC AGGTGCGTCCGCTCTGCGTGTTCGACAAGGAGCGCATCTCCTACACCACCAAAGTGACCGAGACGCAGTCCTGGAACGAC ATCCCGACCTGCAAGGAGCAGGGGCTCGACGTTCAGTATCTGATGCTGCGCGGCATGTTCCTGCCGGGCAAGGTCACGCA GGAGCAGCAGGAGTTCTACGTCGACCTGTTCAGCAAGCTGGTGCAGACGCCGGAATACAAGGACTACATGGAGAAGCAGG CGCTCAAGCCGATCTTCCTCACCGGCAAGGACATGCTGCAGTTCCTCGAAGAGGACGGCTCTCTCAACAAGCAGCTGATG ACGGAAGCCGGCTTCGTCGCCAAGTAG
Upstream 100 bases:
>100_bases ACATGAGGCTGCATCTCGCTTGTGTTCTTGAAGTGACCACAATAAGCCAGCAGTATCCTGGTAGGGTAAAAGCTGGCGCT TCGAACGGGGATGAAAACAC
Downstream 100 bases:
>100_bases GCGGCGAGGCGAGGGGAATAGGGAAGTTTGATGTCCAACGCTGAGCTCGAGATTGCCGTCGACGATCCGACCGCGCCGGA GGAAAATTCTCCGGCCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MRNLIKIAATTVALFATAPAFAGWEPTKPVEIVVAAGAGGASDQMARMMQAAIQKNNLLKQPVVVSLKGGASGAEALMYM KSSDGDPNKILIAYSLIYMLPLSAKLPFDWKELSPVAVIALDQFVLWDNVNGPKTVKEFIDAAKASSSPFKMGGTGSKRE DHVLTVFVEKKTGAKFSYLPYKSGGEAATQLVGGHTESNVNNPSENLEVWRAGQVRPLCVFDKERISYTTKVTETQSWND IPTCKEQGLDVQYLMLRGMFLPGKVTQEQQEFYVDLFSKLVQTPEYKDYMEKQALKPIFLTGKDMLQFLEEDGSLNKQLM TEAGFVAK
Sequences:
>Translated_328_residues MRNLIKIAATTVALFATAPAFAGWEPTKPVEIVVAAGAGGASDQMARMMQAAIQKNNLLKQPVVVSLKGGASGAEALMYM KSSDGDPNKILIAYSLIYMLPLSAKLPFDWKELSPVAVIALDQFVLWDNVNGPKTVKEFIDAAKASSSPFKMGGTGSKRE DHVLTVFVEKKTGAKFSYLPYKSGGEAATQLVGGHTESNVNNPSENLEVWRAGQVRPLCVFDKERISYTTKVTETQSWND IPTCKEQGLDVQYLMLRGMFLPGKVTQEQQEFYVDLFSKLVQTPEYKDYMEKQALKPIFLTGKDMLQFLEEDGSLNKQLM TEAGFVAK >Mature_328_residues MRNLIKIAATTVALFATAPAFAGWEPTKPVEIVVAAGAGGASDQMARMMQAAIQKNNLLKQPVVVSLKGGASGAEALMYM KSSDGDPNKILIAYSLIYMLPLSAKLPFDWKELSPVAVIALDQFVLWDNVNGPKTVKEFIDAAKASSSPFKMGGTGSKRE DHVLTVFVEKKTGAKFSYLPYKSGGEAATQLVGGHTESNVNNPSENLEVWRAGQVRPLCVFDKERISYTTKVTETQSWND IPTCKEQGLDVQYLMLRGMFLPGKVTQEQQEFYVDLFSKLVQTPEYKDYMEKQALKPIFLTGKDMLQFLEEDGSLNKQLM TEAGFVAK
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 - InterPro: IPR006311 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 36100; Mature: 36100
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLIKIAATTVALFATAPAFAGWEPTKPVEIVVAAGAGGASDQMARMMQAAIQKNNLLK CCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCC QPVVVSLKGGASGAEALMYMKSSDGDPNKILIAYSLIYMLPLSAKLPFDWKELSPVAVIA CCEEEEECCCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCCCCCHHHCCCEEEEE LDQFVLWDNVNGPKTVKEFIDAAKASSSPFKMGGTGSKREDHVLTVFVEKKTGAKFSYLP EEEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEEECCCCCEEEECC YKSGGEAATQLVGGHTESNVNNPSENLEVWRAGQVRPLCVFDKERISYTTKVTETQSWND CCCCCHHHHHHHCCCCCCCCCCCHHCCCEEECCCCCEEEEECHHHHEEEEEECCCCCCCC IPTCKEQGLDVQYLMLRGMFLPGKVTQEQQEFYVDLFSKLVQTPEYKDYMEKQALKPIFL CCCHHHHCCCCEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEE TGKDMLQFLEEDGSLNKQLMTEAGFVAK CCHHHHHHHHHCCCCCHHHHHHCCCCCC >Mature Secondary Structure MRNLIKIAATTVALFATAPAFAGWEPTKPVEIVVAAGAGGASDQMARMMQAAIQKNNLLK CCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCC QPVVVSLKGGASGAEALMYMKSSDGDPNKILIAYSLIYMLPLSAKLPFDWKELSPVAVIA CCEEEEECCCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCCCCCHHHCCCEEEEE LDQFVLWDNVNGPKTVKEFIDAAKASSSPFKMGGTGSKREDHVLTVFVEKKTGAKFSYLP EEEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEEECCCCCEEEECC YKSGGEAATQLVGGHTESNVNNPSENLEVWRAGQVRPLCVFDKERISYTTKVTETQSWND CCCCCHHHHHHHCCCCCCCCCCCHHCCCEEECCCCCEEEEECHHHHEEEEEECCCCCCCC IPTCKEQGLDVQYLMLRGMFLPGKVTQEQQEFYVDLFSKLVQTPEYKDYMEKQALKPIFL CCCHHHHCCCCEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEE TGKDMLQFLEEDGSLNKQLMTEAGFVAK CCHHHHHHHHHCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7851418 [H]