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The map label for this gene is yjjA [H]

Identifier: 146342113

GI number: 146342113

Start: 5468667

End: 5469491

Strand: Direct

Name: yjjA [H]

Synonym: BRADO5258

Alternate gene names: 146342113

Gene position: 5468667-5469491 (Clockwise)

Preceding gene: 146342111

Following gene: 146342117

Centisome position: 73.34

GC content: 68.36

Gene sequence:

>825_bases
ATGGCCGACCGGCTGAGCGGCAACCGCATCCTGATCCTGGAAACGCGCGAGGAAGCGCAGTTCTCGCGTCTGCTCGCCGA
GCAAGGCGCCGACGTGCTGCAATGTCCGATGTTCACGATCCAGGACGCACCGGACCCGGCGCCGATCGAGGCCTGGATCC
GCCGCTGCACCGACAGGCCGTTCGACGATCTCGTGCTGATGACCGGCGAAGGACTGCGGCGGCTGATGACCGTGGTGCGC
CGAATCGGAGTGGAAACCGAGTTCGTCGCCGCGCTCGGCAAGGCCCGCAAGTTCACCCGCGGGCCGAAGCCCGGGCGCGC
CTTGCGCGAGCTCGGCCTCGAGTCGCAGGTGACCACCGAGAAGCCGACCTCCGAAGGCGTCGCCGAACTGCTGGGGCGCT
ACGACCTGAAAGGCCATCGTCTCGGCCTGCAGCTCTATCCCGACAAGGACCATTCCGCGCTGATCGGCGCCATCGAAGCG
ACCGGCGCCGAGGTCGACGCCGTGCTGCCCTATGTCTACGACGCCAAGGCGGCCGATGCGAACATCCTCACCGCCATCGA
CGAGATGACCGCCGGCAAGGTCGATGCGATCGCGCTGACCAGCTCGGGCCAGCCGCGCCGGCTGTTCGATGTCGCCAAGG
CGCACGGCGTCGAGGATCGGCTGCGCCATGGCCTGGCGCGCACGCAAATCGCCTCGGTCGGGCCTGTCGTGACGGAGGAG
CTGGCCGCGCACGGCCTGTCGCCATCGATCACCCCAGTGGGCGAGGCCTATTTCATGAAGCCGCTGATCTCGGCGATGGC
CACGGCGCTGGGTGTGAAGGCGTAG

Upstream 100 bases:

>100_bases
CCGTTCCATGCCCTGCTCTATCACCCTCCGCGCCCTTGCGCCAACGCTCGGCGCGGGGGCAGGATGAACAAAACATCACC
TCTTTCGGTGGAGACTGACC

Downstream 100 bases:

>100_bases
CGCGCGGCCAAACTAACAGTGTCGTCGCGGGCTTGACCCGGGACCCATACCGCGTGATGTCCGAAACAGGCAGGCGGCCC
ATCCCACGCGTCCCATGGCG

Product: putative uroporphyrinogen-III synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MADRLSGNRILILETREEAQFSRLLAEQGADVLQCPMFTIQDAPDPAPIEAWIRRCTDRPFDDLVLMTGEGLRRLMTVVR
RIGVETEFVAALGKARKFTRGPKPGRALRELGLESQVTTEKPTSEGVAELLGRYDLKGHRLGLQLYPDKDHSALIGAIEA
TGAEVDAVLPYVYDAKAADANILTAIDEMTAGKVDAIALTSSGQPRRLFDVAKAHGVEDRLRHGLARTQIASVGPVVTEE
LAAHGLSPSITPVGEAYFMKPLISAMATALGVKA

Sequences:

>Translated_274_residues
MADRLSGNRILILETREEAQFSRLLAEQGADVLQCPMFTIQDAPDPAPIEAWIRRCTDRPFDDLVLMTGEGLRRLMTVVR
RIGVETEFVAALGKARKFTRGPKPGRALRELGLESQVTTEKPTSEGVAELLGRYDLKGHRLGLQLYPDKDHSALIGAIEA
TGAEVDAVLPYVYDAKAADANILTAIDEMTAGKVDAIALTSSGQPRRLFDVAKAHGVEDRLRHGLARTQIASVGPVVTEE
LAAHGLSPSITPVGEAYFMKPLISAMATALGVKA
>Mature_273_residues
ADRLSGNRILILETREEAQFSRLLAEQGADVLQCPMFTIQDAPDPAPIEAWIRRCTDRPFDDLVLMTGEGLRRLMTVVRR
IGVETEFVAALGKARKFTRGPKPGRALRELGLESQVTTEKPTSEGVAELLGRYDLKGHRLGLQLYPDKDHSALIGAIEAT
GAEVDAVLPYVYDAKAADANILTAIDEMTAGKVDAIALTSSGQPRRLFDVAKAHGVEDRLRHGLARTQIASVGPVVTEEL
AAHGLSPSITPVGEAYFMKPLISAMATALGVKA

Specific function: Unknown

COG id: COG1587

COG function: function code H; Uroporphyrinogen-III synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003754 [H]

Pfam domain/function: PF02602 HEM4 [H]

EC number: NA

Molecular weight: Translated: 29580; Mature: 29449

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRLSGNRILILETREEAQFSRLLAEQGADVLQCPMFTIQDAPDPAPIEAWIRRCTDRP
CCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEECCCCEEECCCCCCCCHHHHHHHHCCCC
FDDLVLMTGEGLRRLMTVVRRIGVETEFVAALGKARKFTRGPKPGRALRELGLESQVTTE
CHHEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCC
KPTSEGVAELLGRYDLKGHRLGLQLYPDKDHSALIGAIEATGAEVDAVLPYVYDAKAADA
CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEHHHHCCCCHHHHHHHHHCCCCCCC
NILTAIDEMTAGKVDAIALTSSGQPRRLFDVAKAHGVEDRLRHGLARTQIASVGPVVTEE
HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHH
LAAHGLSPSITPVGEAYFMKPLISAMATALGVKA
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ADRLSGNRILILETREEAQFSRLLAEQGADVLQCPMFTIQDAPDPAPIEAWIRRCTDRP
CCCCCCCEEEEEECCHHHHHHHHHHHCCCCEECCCCEEECCCCCCCCHHHHHHHHCCCC
FDDLVLMTGEGLRRLMTVVRRIGVETEFVAALGKARKFTRGPKPGRALRELGLESQVTTE
CHHEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCC
KPTSEGVAELLGRYDLKGHRLGLQLYPDKDHSALIGAIEATGAEVDAVLPYVYDAKAADA
CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEHHHHCCCCHHHHHHHHHCCCCCCC
NILTAIDEMTAGKVDAIALTSSGQPRRLFDVAKAHGVEDRLRHGLARTQIASVGPVVTEE
HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHH
LAAHGLSPSITPVGEAYFMKPLISAMATALGVKA
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]