Click here to switch to the map view.

The map label for this gene is 146342081

Identifier: 146342081

GI number: 146342081

Start: 5437257

End: 5438126

Strand: Reverse

Name: 146342081

Synonym: BRADO5222

Alternate gene names: NA

Gene position: 5438126-5437257 (Counterclockwise)

Preceding gene: 146342082

Following gene: 146342076

Centisome position: 72.93

GC content: 71.03

Gene sequence:

>870_bases
ATGCGTCCACGGCCCTCTTACTCTCGTCCTGTGTTGCGGCCGGCTGCGTTCGCGCTGTCCTTCACCGTCGTGCTGTTCGG
CCTCGGTGCCTGCCAGACCACCGACCTCGGCGACATCACCGGCGCGCTCGGCGGCAAGTCCGAAAAGCCGGGCGCCGCCG
CCTCTGATCCGCGCGCCGAGGTCGATCAGCTGCGCGAGCGCTTTCGCGCCACCCCGAACGATCCCGACCTCGCTTTGCGT
TACGGCAGCGCGCTGCGCGCTACCGGTCAACGCTCGCAGGCCGTCGCCGTGCTGGAGCAGGCGACCATCGCCAATCCGGG
CAACCGGGCGCTGCTCGCGGCCTATGGCCGCGCGCTCGCCGACAACGGCAATTTCCAGCAGGCCTTCGACGTGCTGAGCC
GGGCGCATTCGCCGGAGGATCCCGACTGGCGCATCCTCTCGGCGCAGGGCGCCGCGCTCGACCAGATGGGGCGCAACGAG
GAGGCGCGGCAATACTACGCGACCGCGCTGAAGATCGCGCCCGACGATCCTTCGGTGCTGTCCAATCTCGGCCTGTCCTA
CGCGCTCTCCAACGAGCTGCCGAAGGCCGAGGAGCAGCTGCGCAAGGCGGCCGCCAATCCCGACGCCAGCCCGCGCGTGC
GCACCAATCTCGCCGTCATCGTCGGGCTGCAGGGCCGCATGAGCGAGGCGGAGAGCATCGCGCGCGCGGCACTGCCGCCG
GAGCAGGCCAGCGCCAACGTCGCCTATGTGAGGAAGATCCTGGTGCGCCGGCAGGTCGCGCAGCGCGAGCTGTCGCCGCG
GCAGGACCGGCCCGTCGCGGGCCAGCCGGACAAGGCGCTGGCAAAAGCGCTGAGCCGCTCCGACGACTGA

Upstream 100 bases:

>100_bases
TGAGCCTTGGATTGAGCCTTGGCGATCGCGCAAGCTTAACGGGACCTTAGGGTTAATCTGCCAGCGTGCAGATCATCTGG
TCCCGAAGTAGTTCAGTTGC

Downstream 100 bases:

>100_bases
GCGCTATTTCGCGCCGAGCAGCTTTGCGATCGGCGCCAGCAGCGAGCCGCGCTGCGGCTTCGGCTCGACGCGTCCGGTCA
GCCGGTTCGCGAGCTCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Pilus Assembly Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Repeat Protein; Tetratricopeptide Repeat Family Protein; Signal Peptide; Flp Pilus Assembly Protein TadD; Tetratricopeptide-Repeat Containing Protein

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MRPRPSYSRPVLRPAAFALSFTVVLFGLGACQTTDLGDITGALGGKSEKPGAAASDPRAEVDQLRERFRATPNDPDLALR
YGSALRATGQRSQAVAVLEQATIANPGNRALLAAYGRALADNGNFQQAFDVLSRAHSPEDPDWRILSAQGAALDQMGRNE
EARQYYATALKIAPDDPSVLSNLGLSYALSNELPKAEEQLRKAAANPDASPRVRTNLAVIVGLQGRMSEAESIARAALPP
EQASANVAYVRKILVRRQVAQRELSPRQDRPVAGQPDKALAKALSRSDD

Sequences:

>Translated_289_residues
MRPRPSYSRPVLRPAAFALSFTVVLFGLGACQTTDLGDITGALGGKSEKPGAAASDPRAEVDQLRERFRATPNDPDLALR
YGSALRATGQRSQAVAVLEQATIANPGNRALLAAYGRALADNGNFQQAFDVLSRAHSPEDPDWRILSAQGAALDQMGRNE
EARQYYATALKIAPDDPSVLSNLGLSYALSNELPKAEEQLRKAAANPDASPRVRTNLAVIVGLQGRMSEAESIARAALPP
EQASANVAYVRKILVRRQVAQRELSPRQDRPVAGQPDKALAKALSRSDD
>Mature_289_residues
MRPRPSYSRPVLRPAAFALSFTVVLFGLGACQTTDLGDITGALGGKSEKPGAAASDPRAEVDQLRERFRATPNDPDLALR
YGSALRATGQRSQAVAVLEQATIANPGNRALLAAYGRALADNGNFQQAFDVLSRAHSPEDPDWRILSAQGAALDQMGRNE
EARQYYATALKIAPDDPSVLSNLGLSYALSNELPKAEEQLRKAAANPDASPRVRTNLAVIVGLQGRMSEAESIARAALPP
EQASANVAYVRKILVRRQVAQRELSPRQDRPVAGQPDKALAKALSRSDD

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30976; Mature: 30976

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPRPSYSRPVLRPAAFALSFTVVLFGLGACQTTDLGDITGALGGKSEKPGAAASDPRAE
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHH
VDQLRERFRATPNDPDLALRYGSALRATGQRSQAVAVLEQATIANPGNRALLAAYGRALA
HHHHHHHHCCCCCCCCCEEHHCHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
DNGNFQQAFDVLSRAHSPEDPDWRILSAQGAALDQMGRNEEARQYYATALKIAPDDPSVL
CCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHCCCHHHHHHHHHHHEECCCCHHHH
SNLGLSYALSNELPKAEEQLRKAAANPDASPRVRTNLAVIVGLQGRMSEAESIARAALPP
HHCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHCCEEEEEECCCCHHHHHHHHHHCCCH
EQASANVAYVRKILVRRQVAQRELSPRQDRPVAGQPDKALAKALSRSDD
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MRPRPSYSRPVLRPAAFALSFTVVLFGLGACQTTDLGDITGALGGKSEKPGAAASDPRAE
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHH
VDQLRERFRATPNDPDLALRYGSALRATGQRSQAVAVLEQATIANPGNRALLAAYGRALA
HHHHHHHHCCCCCCCCCEEHHCHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
DNGNFQQAFDVLSRAHSPEDPDWRILSAQGAALDQMGRNEEARQYYATALKIAPDDPSVL
CCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHCCCHHHHHHHHHHHEECCCCHHHH
SNLGLSYALSNELPKAEEQLRKAAANPDASPRVRTNLAVIVGLQGRMSEAESIARAALPP
HHCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHCCEEEEEECCCCHHHHHHHHHHCCCH
EQASANVAYVRKILVRRQVAQRELSPRQDRPVAGQPDKALAKALSRSDD
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA