Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146342076
Identifier: 146342076
GI number: 146342076
Start: 5431431
End: 5432126
Strand: Reverse
Name: 146342076
Synonym: BRADO5217
Alternate gene names: NA
Gene position: 5432126-5431431 (Counterclockwise)
Preceding gene: 146342081
Following gene: 146342075
Centisome position: 72.85
GC content: 66.52
Gene sequence:
>696_bases ATGTCGTCAGTTGCCCGATTCCTGAAGCAGCGCGCCGTCAGGATCCAGACGGCGGGGACCTACACGCTGCCCAACTGGTA CGACCCGGAAGGCAAGCTGCGCTCCTTCGCCTGCCGCACGACGAGGGTGTCGCCGTTTCGCGCGCTGCTCGACGTGCCCG TGGTCGGCAAGGTCGGCGACCGGCTGACGTCGTATTTCCGCGACTTCGGCAAGTTCGAAGGCGAGATCAGCGACACCGTG CATGGCGGCTTCCTGCTCGAGCTGGAGATGACGCGCGCCGAGCGCGCCAAGCTCGCCGAGAAGCTGGTGTGGCTGGAGAA GAAGCAGAAGGATCCGACCGTCCGGGATTCCCGCCGCGAGGCGCGGTTCGTGCCGAACTCGCCGCACTCCGCGCTGACGC TGGCCGATGGCAGCATCATCCCGTGCTTCGTCATCGATGCGTCGATGTCGGGCGCTGCGGTGTCGGCGGAGGTTCAGCCG GAGATCGGCACGCCGCTTGCCGTCGGCAGTTGTGTCGGCCGTGTCGTCCGGCATTTCCCCGACGGCTTTGCCGTCAAATT CGTCGACACCCTCTCGGCCACAACCGAGCTCGAGCGGCGCGTCATCACGCCGCCGACCCGCCCGACGCGGCAGAAGCTGG TCTCCCATGCCGATGATGACCGGATCGAGGCACCGGAGGATTTCTTCATGGTCTGA
Upstream 100 bases:
>100_bases GCGTGAAAATACACGCAGAGATTGTATCAAGCGCATCGCGCCGCGGCGGGGGCCCGGCCATCAGCCATGGGGATGCAAGA GGGACGAGGGGAGGCGTGCA
Downstream 100 bases:
>100_bases TCGCGGCGGCTTCACGTCGCAAGCTGATGCGGGCGTTCGTCATGCGCGGTTTCGCGTATTGGGCGAGCGCGTGAATCAAT GCATGGAACTGGCAGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSSVARFLKQRAVRIQTAGTYTLPNWYDPEGKLRSFACRTTRVSPFRALLDVPVVGKVGDRLTSYFRDFGKFEGEISDTV HGGFLLELEMTRAERAKLAEKLVWLEKKQKDPTVRDSRREARFVPNSPHSALTLADGSIIPCFVIDASMSGAAVSAEVQP EIGTPLAVGSCVGRVVRHFPDGFAVKFVDTLSATTELERRVITPPTRPTRQKLVSHADDDRIEAPEDFFMV
Sequences:
>Translated_231_residues MSSVARFLKQRAVRIQTAGTYTLPNWYDPEGKLRSFACRTTRVSPFRALLDVPVVGKVGDRLTSYFRDFGKFEGEISDTV HGGFLLELEMTRAERAKLAEKLVWLEKKQKDPTVRDSRREARFVPNSPHSALTLADGSIIPCFVIDASMSGAAVSAEVQP EIGTPLAVGSCVGRVVRHFPDGFAVKFVDTLSATTELERRVITPPTRPTRQKLVSHADDDRIEAPEDFFMV >Mature_230_residues SSVARFLKQRAVRIQTAGTYTLPNWYDPEGKLRSFACRTTRVSPFRALLDVPVVGKVGDRLTSYFRDFGKFEGEISDTVH GGFLLELEMTRAERAKLAEKLVWLEKKQKDPTVRDSRREARFVPNSPHSALTLADGSIIPCFVIDASMSGAAVSAEVQPE IGTPLAVGSCVGRVVRHFPDGFAVKFVDTLSATTELERRVITPPTRPTRQKLVSHADDDRIEAPEDFFMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25713; Mature: 25581
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVARFLKQRAVRIQTAGTYTLPNWYDPEGKLRSFACRTTRVSPFRALLDVPVVGKVGD CCHHHHHHHHHHEEEECCCCEECCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCHHHH RLTSYFRDFGKFEGEISDTVHGGFLLELEMTRAERAKLAEKLVWLEKKQKDPTVRDSRRE HHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH ARFVPNSPHSALTLADGSIIPCFVIDASMSGAAVSAEVQPEIGTPLAVGSCVGRVVRHFP CCCCCCCCCCEEEEECCCEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC DGFAVKFVDTLSATTELERRVITPPTRPTRQKLVSHADDDRIEAPEDFFMV CCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCC >Mature Secondary Structure SSVARFLKQRAVRIQTAGTYTLPNWYDPEGKLRSFACRTTRVSPFRALLDVPVVGKVGD CHHHHHHHHHHEEEECCCCEECCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCHHHH RLTSYFRDFGKFEGEISDTVHGGFLLELEMTRAERAKLAEKLVWLEKKQKDPTVRDSRRE HHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH ARFVPNSPHSALTLADGSIIPCFVIDASMSGAAVSAEVQPEIGTPLAVGSCVGRVVRHFP CCCCCCCCCCEEEEECCCEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC DGFAVKFVDTLSATTELERRVITPPTRPTRQKLVSHADDDRIEAPEDFFMV CCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA