Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146342076

Identifier: 146342076

GI number: 146342076

Start: 5431431

End: 5432126

Strand: Reverse

Name: 146342076

Synonym: BRADO5217

Alternate gene names: NA

Gene position: 5432126-5431431 (Counterclockwise)

Preceding gene: 146342081

Following gene: 146342075

Centisome position: 72.85

GC content: 66.52

Gene sequence:

>696_bases
ATGTCGTCAGTTGCCCGATTCCTGAAGCAGCGCGCCGTCAGGATCCAGACGGCGGGGACCTACACGCTGCCCAACTGGTA
CGACCCGGAAGGCAAGCTGCGCTCCTTCGCCTGCCGCACGACGAGGGTGTCGCCGTTTCGCGCGCTGCTCGACGTGCCCG
TGGTCGGCAAGGTCGGCGACCGGCTGACGTCGTATTTCCGCGACTTCGGCAAGTTCGAAGGCGAGATCAGCGACACCGTG
CATGGCGGCTTCCTGCTCGAGCTGGAGATGACGCGCGCCGAGCGCGCCAAGCTCGCCGAGAAGCTGGTGTGGCTGGAGAA
GAAGCAGAAGGATCCGACCGTCCGGGATTCCCGCCGCGAGGCGCGGTTCGTGCCGAACTCGCCGCACTCCGCGCTGACGC
TGGCCGATGGCAGCATCATCCCGTGCTTCGTCATCGATGCGTCGATGTCGGGCGCTGCGGTGTCGGCGGAGGTTCAGCCG
GAGATCGGCACGCCGCTTGCCGTCGGCAGTTGTGTCGGCCGTGTCGTCCGGCATTTCCCCGACGGCTTTGCCGTCAAATT
CGTCGACACCCTCTCGGCCACAACCGAGCTCGAGCGGCGCGTCATCACGCCGCCGACCCGCCCGACGCGGCAGAAGCTGG
TCTCCCATGCCGATGATGACCGGATCGAGGCACCGGAGGATTTCTTCATGGTCTGA

Upstream 100 bases:

>100_bases
GCGTGAAAATACACGCAGAGATTGTATCAAGCGCATCGCGCCGCGGCGGGGGCCCGGCCATCAGCCATGGGGATGCAAGA
GGGACGAGGGGAGGCGTGCA

Downstream 100 bases:

>100_bases
TCGCGGCGGCTTCACGTCGCAAGCTGATGCGGGCGTTCGTCATGCGCGGTTTCGCGTATTGGGCGAGCGCGTGAATCAAT
GCATGGAACTGGCAGCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Type IV Pilus Assembly Protein PilZ

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSSVARFLKQRAVRIQTAGTYTLPNWYDPEGKLRSFACRTTRVSPFRALLDVPVVGKVGDRLTSYFRDFGKFEGEISDTV
HGGFLLELEMTRAERAKLAEKLVWLEKKQKDPTVRDSRREARFVPNSPHSALTLADGSIIPCFVIDASMSGAAVSAEVQP
EIGTPLAVGSCVGRVVRHFPDGFAVKFVDTLSATTELERRVITPPTRPTRQKLVSHADDDRIEAPEDFFMV

Sequences:

>Translated_231_residues
MSSVARFLKQRAVRIQTAGTYTLPNWYDPEGKLRSFACRTTRVSPFRALLDVPVVGKVGDRLTSYFRDFGKFEGEISDTV
HGGFLLELEMTRAERAKLAEKLVWLEKKQKDPTVRDSRREARFVPNSPHSALTLADGSIIPCFVIDASMSGAAVSAEVQP
EIGTPLAVGSCVGRVVRHFPDGFAVKFVDTLSATTELERRVITPPTRPTRQKLVSHADDDRIEAPEDFFMV
>Mature_230_residues
SSVARFLKQRAVRIQTAGTYTLPNWYDPEGKLRSFACRTTRVSPFRALLDVPVVGKVGDRLTSYFRDFGKFEGEISDTVH
GGFLLELEMTRAERAKLAEKLVWLEKKQKDPTVRDSRREARFVPNSPHSALTLADGSIIPCFVIDASMSGAAVSAEVQPE
IGTPLAVGSCVGRVVRHFPDGFAVKFVDTLSATTELERRVITPPTRPTRQKLVSHADDDRIEAPEDFFMV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25713; Mature: 25581

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVARFLKQRAVRIQTAGTYTLPNWYDPEGKLRSFACRTTRVSPFRALLDVPVVGKVGD
CCHHHHHHHHHHEEEECCCCEECCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCHHHH
RLTSYFRDFGKFEGEISDTVHGGFLLELEMTRAERAKLAEKLVWLEKKQKDPTVRDSRRE
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ARFVPNSPHSALTLADGSIIPCFVIDASMSGAAVSAEVQPEIGTPLAVGSCVGRVVRHFP
CCCCCCCCCCEEEEECCCEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC
DGFAVKFVDTLSATTELERRVITPPTRPTRQKLVSHADDDRIEAPEDFFMV
CCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
SSVARFLKQRAVRIQTAGTYTLPNWYDPEGKLRSFACRTTRVSPFRALLDVPVVGKVGD
CHHHHHHHHHHEEEECCCCEECCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCHHHH
RLTSYFRDFGKFEGEISDTVHGGFLLELEMTRAERAKLAEKLVWLEKKQKDPTVRDSRRE
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ARFVPNSPHSALTLADGSIIPCFVIDASMSGAAVSAEVQPEIGTPLAVGSCVGRVVRHFP
CCCCCCCCCCEEEEECCCEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC
DGFAVKFVDTLSATTELERRVITPPTRPTRQKLVSHADDDRIEAPEDFFMV
CCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA