Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is cutL [H]
Identifier: 146342004
GI number: 146342004
Start: 5339603
End: 5341912
Strand: Reverse
Name: cutL [H]
Synonym: BRADO5140
Alternate gene names: 146342004
Gene position: 5341912-5339603 (Counterclockwise)
Preceding gene: 146342005
Following gene: 146342003
Centisome position: 71.64
GC content: 66.88
Gene sequence:
>2310_bases ATGGCAGCTCCAATCAAGTTCGGTATGGGACAAAGCGTTCTCCGGAAAGAGGATGACGCGCTGATTCGCGGCAAGGGCCG CTATACCGACGATCTCGCGCCATCCGCCGCCCTGCATGCCCTCGTGCTGCGCTCGCCGCAGGCCCATGCCAAGTTCACCA TCGACGTGTCCGCAGCGCGGCTGCTGCCGGGCGTGGCGCTGATCCTCACCGCCGAGGACACTGCGGAACTCGGCGGCCTG CCGTGCCTGTTCAACCTCGAGACCGATCCCTTCACCGCGCCGCCTTATCCGATCCTGGCCAAGGACGAGGTGCGCCATGT CGGCGACGCCGTGGCCTTCGTCGTGGCCGACACGCTCGATCACGCGCGCGACGCGCTCGAGGCAATCAAGGTCGAATGGA CGACCTTGCCGGCGGTCACCGGCGTCGTGAATGCGATCAAGCCGGGCGCGCCGCAGGTCTGGCCGGATCACAAGGGCAAC GTGCTGTTCGACGTCTCGATCGGCGACAAGGCCGCGACCGAGGCGGCATTTGCGAAAGCTCACGCGGTCGCCGAGATCCG CATCGTCAATCCGCGCGTGGTCGCGAGCTTCATGGAGACGCGCGCCGCCGTCTGCGAATACGACACCAAGCGCGATCATC TGACGCTCACCGCCGGCAGCCAGGGCAGCCACCGGCTGCGCGACATCCTCTGCCAGAACGTGCTGAAGATCCCGACCGAG AAGATGCGGGTGATCTGCCCGGATGTCGGCGGCGGCTTCGGCACGAAGCTGTTTCCGTACCGGGAATATGCGCTGGTCGC CGTGGCAGCGCAGCGGCTGCGCAAGTCGGTGCGCTGGGCCGCCGACCGCTCCGAGCATTTCATGGGCGACGCGCAGGGCC GCGACAACGTCACGACAGCGAGGATGGCGCTCGCCGAGGACGGCAAGTTCCTCGCGATGGACGTCGACCTGATGGGCGAC ATGGGCGCCTATCTGTCGACGTTTGCGCCCTACATCCCGCATGGCGGCGCCGGCATGCTGCCGGGCCTCTACGACATCCA GAAATTCCACTGCCGGGTGCGCACGATCTTCACCCATACCGTGCCGGTCGATGCCTATCGCGGCGCCGGCAGGCCGGAGG CCGCCTATGTCGTCGAGCGTCTCGTCGATGCCTGCGCGCGCAAGCTCGACATGTCGGTCGATGCCATCCGGCGCAAGAAC TTCATCCCGCCGCGCGCGCTGCCTTACAAGACTGCGACCGGCAAGGTGTACGATTCCGGCGACTTCAACGCGCATCTCAA GCGCGCCATGGAGATCGCCGAGTGGAAAGATTTTTCCAAGCGCGCCAAGGCCGCCAAGAAGAATGGCCTCGTCCGCGGCA TCGGGCTGGCCAGCTATGTCGAGGTCTGCGGCACGATGGGCGAGGAGACCGCCCATGTGAAGCTCGATCCCAATGGCGAT GTGACGATCCTGATCGGCACGCAGTCGAGCGGGCAGGGTCATCAGACGGCCTATGCCCAGATCGTCGCCGAGCAGTTCGG CCTGCCGCCGGAGCGCGTGCACATCCACCAGGGCGACACCGCGCAGGTTCCGACGGGGCTCGGCACCGGCGGCTCGGCTT CGATTCCCTCGGGCGGCGTCAGCGTGCAGCGCGCCACCCATGAGCTCGGCGATAAGCTCAAGCAGATCGCGGCCGAAGCG CTCGAAGCGGGCTTGGGCGACCTCGAGATCGCCGACGGCGTGATCCGCGTCGCCGGCACCGACCGGTCGATCACCTTCGC CGATCTCGCCAAGCGGCCCGGCGTCGATCCGGCCAAGCTCAACGGCAGCGCCACCTTCGCCAGCGCCGACGGCACCTATC CGAACGGCACGCATGTCGCTGAGATCGAGCTCGATCCGGCCACCGGCATTATCAGAATCGTGAACTACGTGATCGTCGAC GATTTTGGCGTGACGCTGAACCCGCTGCTGCTCGCCGGCCAGGTGCATGGCGGCGCGGTGCAGGGCATCGGTCAGGCGTT GATGGAGCAGGTGGTCTACAGCAACTCGGATGCGCAGCTTGTCACCGGCAGCTACATGGACTACGCGCTGCCGCGCGCCG CGGACGCGCCGTCCTTCACCTTCGAGACCCACAACGTGCCCTGCAAGACCAATCCGATGGGCGTCAAGGGCGCGGGCGAG GCGGGCGCGATCGGCTCCTGTCCGGCGGTGGTCAACGCCGTCGTCGAGGCGCTGTGGCGTGAGTACAAGATCGACCACAT CGACATGCCGGCGACGCCCGAGCGGGTCTGGATCGCGATCCGGGAGCAGCACCGCCGTCACAGTCTCTGA
Upstream 100 bases:
>100_bases CGATCGTGTCCCCCTGCGGCGGAGTTGCCGTTTGCGCGAGGCCTCGTTCCGCTGCAATATGGCGCCAACATCGCCAAAAC GAAGTGGGACGTGAAACCAG
Downstream 100 bases:
>100_bases ATACTGTTTCCCAAACACTCTCGGATAACCGCCTCAATTGCGGAATAACCCGCCGACTGAGGGGTTGACCAACCAGGCGC GACCCGTCCAGGTGGGCTGG
Product: putative aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 769; Mature: 768
Protein sequence:
>769_residues MAAPIKFGMGQSVLRKEDDALIRGKGRYTDDLAPSAALHALVLRSPQAHAKFTIDVSAARLLPGVALILTAEDTAELGGL PCLFNLETDPFTAPPYPILAKDEVRHVGDAVAFVVADTLDHARDALEAIKVEWTTLPAVTGVVNAIKPGAPQVWPDHKGN VLFDVSIGDKAATEAAFAKAHAVAEIRIVNPRVVASFMETRAAVCEYDTKRDHLTLTAGSQGSHRLRDILCQNVLKIPTE KMRVICPDVGGGFGTKLFPYREYALVAVAAQRLRKSVRWAADRSEHFMGDAQGRDNVTTARMALAEDGKFLAMDVDLMGD MGAYLSTFAPYIPHGGAGMLPGLYDIQKFHCRVRTIFTHTVPVDAYRGAGRPEAAYVVERLVDACARKLDMSVDAIRRKN FIPPRALPYKTATGKVYDSGDFNAHLKRAMEIAEWKDFSKRAKAAKKNGLVRGIGLASYVEVCGTMGEETAHVKLDPNGD VTILIGTQSSGQGHQTAYAQIVAEQFGLPPERVHIHQGDTAQVPTGLGTGGSASIPSGGVSVQRATHELGDKLKQIAAEA LEAGLGDLEIADGVIRVAGTDRSITFADLAKRPGVDPAKLNGSATFASADGTYPNGTHVAEIELDPATGIIRIVNYVIVD DFGVTLNPLLLAGQVHGGAVQGIGQALMEQVVYSNSDAQLVTGSYMDYALPRAADAPSFTFETHNVPCKTNPMGVKGAGE AGAIGSCPAVVNAVVEALWREYKIDHIDMPATPERVWIAIREQHRRHSL
Sequences:
>Translated_769_residues MAAPIKFGMGQSVLRKEDDALIRGKGRYTDDLAPSAALHALVLRSPQAHAKFTIDVSAARLLPGVALILTAEDTAELGGL PCLFNLETDPFTAPPYPILAKDEVRHVGDAVAFVVADTLDHARDALEAIKVEWTTLPAVTGVVNAIKPGAPQVWPDHKGN VLFDVSIGDKAATEAAFAKAHAVAEIRIVNPRVVASFMETRAAVCEYDTKRDHLTLTAGSQGSHRLRDILCQNVLKIPTE KMRVICPDVGGGFGTKLFPYREYALVAVAAQRLRKSVRWAADRSEHFMGDAQGRDNVTTARMALAEDGKFLAMDVDLMGD MGAYLSTFAPYIPHGGAGMLPGLYDIQKFHCRVRTIFTHTVPVDAYRGAGRPEAAYVVERLVDACARKLDMSVDAIRRKN FIPPRALPYKTATGKVYDSGDFNAHLKRAMEIAEWKDFSKRAKAAKKNGLVRGIGLASYVEVCGTMGEETAHVKLDPNGD VTILIGTQSSGQGHQTAYAQIVAEQFGLPPERVHIHQGDTAQVPTGLGTGGSASIPSGGVSVQRATHELGDKLKQIAAEA LEAGLGDLEIADGVIRVAGTDRSITFADLAKRPGVDPAKLNGSATFASADGTYPNGTHVAEIELDPATGIIRIVNYVIVD DFGVTLNPLLLAGQVHGGAVQGIGQALMEQVVYSNSDAQLVTGSYMDYALPRAADAPSFTFETHNVPCKTNPMGVKGAGE AGAIGSCPAVVNAVVEALWREYKIDHIDMPATPERVWIAIREQHRRHSL >Mature_768_residues AAPIKFGMGQSVLRKEDDALIRGKGRYTDDLAPSAALHALVLRSPQAHAKFTIDVSAARLLPGVALILTAEDTAELGGLP CLFNLETDPFTAPPYPILAKDEVRHVGDAVAFVVADTLDHARDALEAIKVEWTTLPAVTGVVNAIKPGAPQVWPDHKGNV LFDVSIGDKAATEAAFAKAHAVAEIRIVNPRVVASFMETRAAVCEYDTKRDHLTLTAGSQGSHRLRDILCQNVLKIPTEK MRVICPDVGGGFGTKLFPYREYALVAVAAQRLRKSVRWAADRSEHFMGDAQGRDNVTTARMALAEDGKFLAMDVDLMGDM GAYLSTFAPYIPHGGAGMLPGLYDIQKFHCRVRTIFTHTVPVDAYRGAGRPEAAYVVERLVDACARKLDMSVDAIRRKNF IPPRALPYKTATGKVYDSGDFNAHLKRAMEIAEWKDFSKRAKAAKKNGLVRGIGLASYVEVCGTMGEETAHVKLDPNGDV TILIGTQSSGQGHQTAYAQIVAEQFGLPPERVHIHQGDTAQVPTGLGTGGSASIPSGGVSVQRATHELGDKLKQIAAEAL EAGLGDLEIADGVIRVAGTDRSITFADLAKRPGVDPAKLNGSATFASADGTYPNGTHVAEIELDPATGIIRIVNYVIVDD FGVTLNPLLLAGQVHGGAVQGIGQALMEQVVYSNSDAQLVTGSYMDYALPRAADAPSFTFETHNVPCKTNPMGVKGAGEA GAIGSCPAVVNAVVEALWREYKIDHIDMPATPERVWIAIREQHRRHSL
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=778, Percent_Identity=25.4498714652956, Blast_Score=158, Evalue=2e-38, Organism=Homo sapiens, GI91823271, Length=784, Percent_Identity=23.9795918367347, Blast_Score=137, Evalue=3e-32, Organism=Escherichia coli, GI1789230, Length=760, Percent_Identity=28.0263157894737, Blast_Score=204, Evalue=2e-53, Organism=Escherichia coli, GI1789246, Length=809, Percent_Identity=24.9690976514215, Blast_Score=198, Evalue=1e-51, Organism=Escherichia coli, GI1786478, Length=737, Percent_Identity=24.8303934871099, Blast_Score=118, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17540638, Length=780, Percent_Identity=23.3333333333333, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17539860, Length=762, Percent_Identity=24.0157480314961, Blast_Score=129, Evalue=6e-30, Organism=Caenorhabditis elegans, GI32566215, Length=551, Percent_Identity=23.956442831216, Blast_Score=116, Evalue=5e-26, Organism=Drosophila melanogaster, GI17737937, Length=735, Percent_Identity=26.2585034013605, Blast_Score=129, Evalue=6e-30, Organism=Drosophila melanogaster, GI24647199, Length=780, Percent_Identity=21.7948717948718, Blast_Score=100, Evalue=5e-21, Organism=Drosophila melanogaster, GI24647193, Length=714, Percent_Identity=23.249299719888, Blast_Score=94, Evalue=4e-19, Organism=Drosophila melanogaster, GI24647201, Length=744, Percent_Identity=21.2365591397849, Blast_Score=79, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 82345; Mature: 82214
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPIKFGMGQSVLRKEDDALIRGKGRYTDDLAPSAALHALVLRSPQAHAKFTIDVSAAR CCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHH LLPGVALILTAEDTAELGGLPCLFNLETDPFTAPPYPILAKDEVRHVGDAVAFVVADTLD HCCCEEEEEEECCHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH HARDALEAIKVEWTTLPAVTGVVNAIKPGAPQVWPDHKGNVLFDVSIGDKAATEAAFAKA HHHHHHHHHEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHH HAVAEIRIVNPRVVASFMETRAAVCEYDTKRDHLTLTAGSQGSHRLRDILCQNVLKIPTE HEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC KMRVICPDVGGGFGTKLFPYREYALVAVAAQRLRKSVRWAADRSEHFMGDAQGRDNVTTA CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHH RMALAEDGKFLAMDVDLMGDMGAYLSTFAPYIPHGGAGMLPGLYDIQKFHCRVRTIFTHT HHHHHCCCCEEEEEEHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEEEEEEEEE VPVDAYRGAGRPEAAYVVERLVDACARKLDMSVDAIRRKNFIPPRALPYKTATGKVYDSG CCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCEEECC DFNAHLKRAMEIAEWKDFSKRAKAAKKNGLVRGIGLASYVEVCGTMGEETAHVKLDPNGD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCCCEEEEECCCCC VTILIGTQSSGQGHQTAYAQIVAEQFGLPPERVHIHQGDTAQVPTGLGTGGSASIPSGGV EEEEEECCCCCCCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCC SVQRATHELGDKLKQIAAEALEAGLGDLEIADGVIRVAGTDRSITFADLAKRPGVDPAKL HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCEEHHHHHHCCCCCHHHC NGSATFASADGTYPNGTHVAEIELDPATGIIRIVNYVIVDDFGVTLNPLLLAGQVHGGAV CCCEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHEECCCCCCCCEEEEECCCCHHH QGIGQALMEQVVYSNSDAQLVTGSYMDYALPRAADAPSFTFETHNVPCKTNPMGVKGAGE HHHHHHHHHHHHHCCCCCEEEECCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC AGAIGSCPAVVNAVVEALWREYKIDHIDMPATPERVWIAIREQHRRHSL CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEHHHHHHHHHCCC >Mature Secondary Structure AAPIKFGMGQSVLRKEDDALIRGKGRYTDDLAPSAALHALVLRSPQAHAKFTIDVSAAR CCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHH LLPGVALILTAEDTAELGGLPCLFNLETDPFTAPPYPILAKDEVRHVGDAVAFVVADTLD HCCCEEEEEEECCHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH HARDALEAIKVEWTTLPAVTGVVNAIKPGAPQVWPDHKGNVLFDVSIGDKAATEAAFAKA HHHHHHHHHEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHH HAVAEIRIVNPRVVASFMETRAAVCEYDTKRDHLTLTAGSQGSHRLRDILCQNVLKIPTE HEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC KMRVICPDVGGGFGTKLFPYREYALVAVAAQRLRKSVRWAADRSEHFMGDAQGRDNVTTA CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHH RMALAEDGKFLAMDVDLMGDMGAYLSTFAPYIPHGGAGMLPGLYDIQKFHCRVRTIFTHT HHHHHCCCCEEEEEEHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEEEEEEEEE VPVDAYRGAGRPEAAYVVERLVDACARKLDMSVDAIRRKNFIPPRALPYKTATGKVYDSG CCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCEEECC DFNAHLKRAMEIAEWKDFSKRAKAAKKNGLVRGIGLASYVEVCGTMGEETAHVKLDPNGD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCCCEEEEECCCCC VTILIGTQSSGQGHQTAYAQIVAEQFGLPPERVHIHQGDTAQVPTGLGTGGSASIPSGGV EEEEEECCCCCCCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCC SVQRATHELGDKLKQIAAEALEAGLGDLEIADGVIRVAGTDRSITFADLAKRPGVDPAKL HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCEEHHHHHHCCCCCHHHC NGSATFASADGTYPNGTHVAEIELDPATGIIRIVNYVIVDDFGVTLNPLLLAGQVHGGAV CCCEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHEECCCCCCCCEEEEECCCCHHH QGIGQALMEQVVYSNSDAQLVTGSYMDYALPRAADAPSFTFETHNVPCKTNPMGVKGAGE HHHHHHHHHHHHHCCCCCEEEECCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC AGAIGSCPAVVNAVVEALWREYKIDHIDMPATPERVWIAIREQHRRHSL CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]