Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146341989
Identifier: 146341989
GI number: 146341989
Start: 5325050
End: 5325475
Strand: Reverse
Name: 146341989
Synonym: BRADO5125
Alternate gene names: NA
Gene position: 5325475-5325050 (Counterclockwise)
Preceding gene: 146341990
Following gene: 146341988
Centisome position: 71.42
GC content: 68.54
Gene sequence:
>426_bases ATGGCGGCGAACGCGGACACGCCGCGGCCGATCGCAGCGGTGCTTGCCTGGCCATGGATATGGCCGCTGGCCCGGCTCGC ATTGGTCTCGGCCTATCTGATCGGCGGCGTCCAGAAGCTCATGGACTTCCCCGGCGCCGTCGCCGAGCAGGCCCATTTCG GCCTGCAGCCGGCGGCACTGTGGGCGGTCGCGGCGATCGCCGTCGAGCTGATCGGCTCCGTCCTCGTCGTGATCAACCGC TTCGTCTGGTTCGGCGCCGGCGCGCTCGGCGTGCTGACATCAGTCGCGATGCTCACCGCCAACGACTTCTGGCACATGGA CGGCCACGACCGTTTCATGGCGCTGAATGCCTTCTTCGAGCATCTCGGCCTGATCGCAGGCCTGGTGCTCGTCTCCCTCA TGTCGTGGCGCGCGCGCCGCGCCTGA
Upstream 100 bases:
>100_bases TGCACGGCCACGATCACGCGCGCTCCTGGTCGAGCCAGCTGCCGGTGTCCGATCTCAAGAGCTTTTGGGGCGCGCTCGGC TGCGCCTGCTGGGCCGTGTG
Downstream 100 bases:
>100_bases TCCGTTTGCATTTGTCCGAGGTTGTCATGATCCGCTCCCGTCATCTCGTCGGCGCACTCGTCGCCACCACGCTGCTCGCC GCTCCCGCGCTCGCCAGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: DoxX Family; Transmembrane Protein
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MAANADTPRPIAAVLAWPWIWPLARLALVSAYLIGGVQKLMDFPGAVAEQAHFGLQPAALWAVAAIAVELIGSVLVVINR FVWFGAGALGVLTSVAMLTANDFWHMDGHDRFMALNAFFEHLGLIAGLVLVSLMSWRARRA
Sequences:
>Translated_141_residues MAANADTPRPIAAVLAWPWIWPLARLALVSAYLIGGVQKLMDFPGAVAEQAHFGLQPAALWAVAAIAVELIGSVLVVINR FVWFGAGALGVLTSVAMLTANDFWHMDGHDRFMALNAFFEHLGLIAGLVLVSLMSWRARRA >Mature_140_residues AANADTPRPIAAVLAWPWIWPLARLALVSAYLIGGVQKLMDFPGAVAEQAHFGLQPAALWAVAAIAVELIGSVLVVINRF VWFGAGALGVLTSVAMLTANDFWHMDGHDRFMALNAFFEHLGLIAGLVLVSLMSWRARRA
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15221; Mature: 15090
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANADTPRPIAAVLAWPWIWPLARLALVSAYLIGGVQKLMDFPGAVAEQAHFGLQPAAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHH WAVAAIAVELIGSVLVVINRFVWFGAGALGVLTSVAMLTANDFWHMDGHDRFMALNAFFE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH HLGLIAGLVLVSLMSWRARRA HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AANADTPRPIAAVLAWPWIWPLARLALVSAYLIGGVQKLMDFPGAVAEQAHFGLQPAAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHH WAVAAIAVELIGSVLVVINRFVWFGAGALGVLTSVAMLTANDFWHMDGHDRFMALNAFFE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH HLGLIAGLVLVSLMSWRARRA HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA