Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146341987
Identifier: 146341987
GI number: 146341987
Start: 5322719
End: 5324128
Strand: Reverse
Name: 146341987
Synonym: BRADO5123
Alternate gene names: NA
Gene position: 5324128-5322719 (Counterclockwise)
Preceding gene: 146341988
Following gene: 146341986
Centisome position: 71.4
GC content: 66.74
Gene sequence:
>1410_bases ATGCTCACGCGGATGCGCATGGCTCAGCCACTGACGCGGACAGCCGCGGCGCTTGCGATCGTCGCGACCTCGTGCGGCGC GGCCGTCGCCGAGGACGCACGCCCCGCCATCCGCACCAACCGCTGGCAGGAGGACTGGTCCGCCCTTGGCAATCCTGCGC TGCGCACGGCGCCGTTCGACCCGATCAAATACGTCCCGCTGCAGCCCGGCCGGCCCTCTAGCTACGTCTCGTTCGGCATG ACCTTGCGCGAGCGGTTCGAGAGCCTGGATGCCGCAAGCTTCGGCATCGGCGGCGCCAAGCCCGACACTCACGTCCTCCA TCGGCTGCAGCTCCATGTCGATGCGCATTTCGACGAGCACTGGCAGGCATTCGTGCAGCTCGAGGACGACCGCGCCTTTG GCAAGGCCAACATCACCCCGGTCGACCAGGACCCGCTCGATCTGCGGCTCGCCTTCCTGGCCTACGTCAATGCGACCGGG CAGGGCACCTTCAAGGCCCGTGTCGGCCGGCAGGATTTCGATTTCGACCTGCAGCGCTTCGTCTCGTCGCGCGACGGCCC CAATGTGCGCCAATCCTTCGATGCGCTGTGGGGCGATTGGGAGAGCGGGCCGTGGCGCTTCATCGGCTTCGTCAGCCGAC CGGTGCAGTATAGTGTGGTGCATCCGTTCGACGACACGTCCAATGGAAAATTCCTGTTCCACACCTTCCGGGTCGAGCGC CAGGTGCTCGGCACCAACGAGCTGTCGTCGTATTACTCCTACTATCAGCGCGACGCTGCGCGCTTCCTCGACGCCGCCGG CCTCGAGCAGCGCCACGTGCTCGACATCCGCTTCGCCGGCAAGCTCAAAGGCTTCGACTGGGATCTCGAGGCGATGGGGC AGGCCGGCTCGGTGGGATCGAAGCAGATCCGGGCCTGGGGCGCCGGCGCGCGCGCCGGCTACACCTTCGCCGATGTCGCC TGGCAGCCGCGCATCGGCCTGCAACTCGACGGCGCCTCCGGCGACCGCCATCCCGGCGACGGCACGATCGAGACGTTCAA TCCGCTGTTTCCCAACGGCTATTATTTCACGCTGGCCGGCTTCACCGGCTATACCAACCTGATCCACGTCAAGCCGTCGC TGACCCTGAAGCCCACGGACGCGCTGTCCTTCATGGCCGCCATCGGCCTGCAATGGCGTGCGACGACGGCGGATGCGATC TATGTCCAGCCCAATGTCGCGTTGGCCGCGACGGCGGGGCGGGGCAGTCGGTGGTCCGGCGCCTATGCACAGCTGCGCGC CGATTGCCGCTTCAACGCCAATCTCACCGGGGCGCTCGAGGCCGTGCACTATGAGATCGGCGATACGCTGCGCCGGGCCG GCGGACACGATTCGAACTACATCGGCATCGAGCTGAAATACGCGCTCTGA
Upstream 100 bases:
>100_bases GTACTGGTCCAGCCGTTCACTTCCGACAAGCGCACGCAGGCGCTGCTGCAGTTCCCCGGCGGCTATGTCGCGGAGATCCA CGCGCTGGTGAAGTAGCCCG
Downstream 100 bases:
>100_bases CCAACGAAGGCAGGATCCCATGGCGACCACCGAACAGCGCATCGTGCCGCTCTTGCTCAGCGTCAATGCCGGCTATGTCG ACACCGCCGGCTTCCTGGCC
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MLTRMRMAQPLTRTAAALAIVATSCGAAVAEDARPAIRTNRWQEDWSALGNPALRTAPFDPIKYVPLQPGRPSSYVSFGM TLRERFESLDAASFGIGGAKPDTHVLHRLQLHVDAHFDEHWQAFVQLEDDRAFGKANITPVDQDPLDLRLAFLAYVNATG QGTFKARVGRQDFDFDLQRFVSSRDGPNVRQSFDALWGDWESGPWRFIGFVSRPVQYSVVHPFDDTSNGKFLFHTFRVER QVLGTNELSSYYSYYQRDAARFLDAAGLEQRHVLDIRFAGKLKGFDWDLEAMGQAGSVGSKQIRAWGAGARAGYTFADVA WQPRIGLQLDGASGDRHPGDGTIETFNPLFPNGYYFTLAGFTGYTNLIHVKPSLTLKPTDALSFMAAIGLQWRATTADAI YVQPNVALAATAGRGSRWSGAYAQLRADCRFNANLTGALEAVHYEIGDTLRRAGGHDSNYIGIELKYAL
Sequences:
>Translated_469_residues MLTRMRMAQPLTRTAAALAIVATSCGAAVAEDARPAIRTNRWQEDWSALGNPALRTAPFDPIKYVPLQPGRPSSYVSFGM TLRERFESLDAASFGIGGAKPDTHVLHRLQLHVDAHFDEHWQAFVQLEDDRAFGKANITPVDQDPLDLRLAFLAYVNATG QGTFKARVGRQDFDFDLQRFVSSRDGPNVRQSFDALWGDWESGPWRFIGFVSRPVQYSVVHPFDDTSNGKFLFHTFRVER QVLGTNELSSYYSYYQRDAARFLDAAGLEQRHVLDIRFAGKLKGFDWDLEAMGQAGSVGSKQIRAWGAGARAGYTFADVA WQPRIGLQLDGASGDRHPGDGTIETFNPLFPNGYYFTLAGFTGYTNLIHVKPSLTLKPTDALSFMAAIGLQWRATTADAI YVQPNVALAATAGRGSRWSGAYAQLRADCRFNANLTGALEAVHYEIGDTLRRAGGHDSNYIGIELKYAL >Mature_469_residues MLTRMRMAQPLTRTAAALAIVATSCGAAVAEDARPAIRTNRWQEDWSALGNPALRTAPFDPIKYVPLQPGRPSSYVSFGM TLRERFESLDAASFGIGGAKPDTHVLHRLQLHVDAHFDEHWQAFVQLEDDRAFGKANITPVDQDPLDLRLAFLAYVNATG QGTFKARVGRQDFDFDLQRFVSSRDGPNVRQSFDALWGDWESGPWRFIGFVSRPVQYSVVHPFDDTSNGKFLFHTFRVER QVLGTNELSSYYSYYQRDAARFLDAAGLEQRHVLDIRFAGKLKGFDWDLEAMGQAGSVGSKQIRAWGAGARAGYTFADVA WQPRIGLQLDGASGDRHPGDGTIETFNPLFPNGYYFTLAGFTGYTNLIHVKPSLTLKPTDALSFMAAIGLQWRATTADAI YVQPNVALAATAGRGSRWSGAYAQLRADCRFNANLTGALEAVHYEIGDTLRRAGGHDSNYIGIELKYAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51935; Mature: 51935
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRMRMAQPLTRTAAALAIVATSCGAAVAEDARPAIRTNRWQEDWSALGNPALRTAPFD CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHCCCCHHHHHHHCCCCEECCCCC PIKYVPLQPGRPSSYVSFGMTLRERFESLDAASFGIGGAKPDTHVLHRLQLHVDAHFDEH CEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHEEEEEEEECCCCCC WQAFVQLEDDRAFGKANITPVDQDPLDLRLAFLAYVNATGQGTFKARVGRQDFDFDLQRF EEEEEEEECCCCCCCCCCCCCCCCCHHHHEEEHEEECCCCCCEEEEECCCCCCCHHHHHH VSSRDGPNVRQSFDALWGDWESGPWRFIGFVSRPVQYSVVHPFDDTSNGKFLFHTFRVER HHCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEEEEEEHH QVLGTNELSSYYSYYQRDAARFLDAAGLEQRHVLDIRFAGKLKGFDWDLEAMGQAGSVGS HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHCCCCCCCCC KQIRAWGAGARAGYTFADVAWQPRIGLQLDGASGDRHPGDGTIETFNPLFPNGYYFTLAG HHHEEECCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC FTGYTNLIHVKPSLTLKPTDALSFMAAIGLQWRATTADAIYVQPNVALAATAGRGSRWSG CCCCCEEEEECCCEEECCCHHHHHHHHHCCEEEECCCCEEEECCCEEEEEECCCCCCCCC AYAQLRADCRFNANLTGALEAVHYEIGDTLRRAGGHDSNYIGIELKYAL CHHHEEECCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEC >Mature Secondary Structure MLTRMRMAQPLTRTAAALAIVATSCGAAVAEDARPAIRTNRWQEDWSALGNPALRTAPFD CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHCCCCHHHHHHHCCCCEECCCCC PIKYVPLQPGRPSSYVSFGMTLRERFESLDAASFGIGGAKPDTHVLHRLQLHVDAHFDEH CEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHEEEEEEEECCCCCC WQAFVQLEDDRAFGKANITPVDQDPLDLRLAFLAYVNATGQGTFKARVGRQDFDFDLQRF EEEEEEEECCCCCCCCCCCCCCCCCHHHHEEEHEEECCCCCCEEEEECCCCCCCHHHHHH VSSRDGPNVRQSFDALWGDWESGPWRFIGFVSRPVQYSVVHPFDDTSNGKFLFHTFRVER HHCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEEEEEEHH QVLGTNELSSYYSYYQRDAARFLDAAGLEQRHVLDIRFAGKLKGFDWDLEAMGQAGSVGS HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHCCCCCCCCC KQIRAWGAGARAGYTFADVAWQPRIGLQLDGASGDRHPGDGTIETFNPLFPNGYYFTLAG HHHEEECCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC FTGYTNLIHVKPSLTLKPTDALSFMAAIGLQWRATTADAIYVQPNVALAATAGRGSRWSG CCCCCEEEEECCCEEECCCHHHHHHHHHCCEEEECCCCEEEECCCEEEEEECCCCCCCCC AYAQLRADCRFNANLTGALEAVHYEIGDTLRRAGGHDSNYIGIELKYAL CHHHEEECCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA