Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146341986
Identifier: 146341986
GI number: 146341986
Start: 5322010
End: 5322699
Strand: Reverse
Name: 146341986
Synonym: BRADO5122
Alternate gene names: NA
Gene position: 5322699-5322010 (Counterclockwise)
Preceding gene: 146341987
Following gene: 146341985
Centisome position: 71.38
GC content: 67.83
Gene sequence:
>690_bases ATGGCGACCACCGAACAGCGCATCGTGCCGCTCTTGCTCAGCGTCAATGCCGGCTATGTCGACACCGCCGGCTTCCTGGC CCTGCAGGGCCTGTTCACCGCGCATGTCACCGGCAACTTCGTGACCTTCGGCGCGGCGCTGGCGCTCGGCACCTCCGGCG CGATCGCCAAGCTGCTGGCGCTGCCGGTGTTCTGTGTCGTCGTGATCGCGACGCGGCTGACCGGCACCTTGCTGTCGCGC CGATGGTCGCGCGTCTTCGAGATCCTGATCACCGTCAAGCTGCTGCTGCTGATCCTGGGCGCCGCGCTCGCGATCCATTT CGGGCCGTTCCACAATGGCGACAGCCACGAGGCGATCCTCACCGGCATGGTCCTGGTCGCTGCGATGGCCATTCAGAATG CCGTGCACCGGATCCATTTGCCGACCGCGCCGCCCTCGACCCTGATGACTGGCACGACGACGCAGGTCATGATCGACATC GCCGACAAGATCTATGTCGGCGACAAGGGCCAGACTCCCCCGCCGGGGCGGCTGGTGCAGATGGCGATCAACGTGGCGGC CTTCGCGCTCGGCTGCGGCGCCGCAGCGCTGCTGTTCGTGCGGCTGGGCAGCTGGTGCTTCGTCATCCCGCCGATCGTGG CGGCGCTGACGCTCGTCGCGCGCATGGCTGGTCCGCAACCCGCGCGTTGA
Upstream 100 bases:
>100_bases TATGAGATCGGCGATACGCTGCGCCGGGCCGGCGGACACGATTCGAACTACATCGGCATCGAGCTGAAATACGCGCTCTG ACCAACGAAGGCAGGATCCC
Downstream 100 bases:
>100_bases GGCTGTACTCGCGGCTCGGTCTTCGTGCCTACGGTTGGATGACGGAAATTTTAGCTGCCGCTCACGAAAAGTTATCGATC CCGAAGCGGGGGTTCGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Permease Transmembrane Protein
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MATTEQRIVPLLLSVNAGYVDTAGFLALQGLFTAHVTGNFVTFGAALALGTSGAIAKLLALPVFCVVVIATRLTGTLLSR RWSRVFEILITVKLLLLILGAALAIHFGPFHNGDSHEAILTGMVLVAAMAIQNAVHRIHLPTAPPSTLMTGTTTQVMIDI ADKIYVGDKGQTPPPGRLVQMAINVAAFALGCGAAALLFVRLGSWCFVIPPIVAALTLVARMAGPQPAR
Sequences:
>Translated_229_residues MATTEQRIVPLLLSVNAGYVDTAGFLALQGLFTAHVTGNFVTFGAALALGTSGAIAKLLALPVFCVVVIATRLTGTLLSR RWSRVFEILITVKLLLLILGAALAIHFGPFHNGDSHEAILTGMVLVAAMAIQNAVHRIHLPTAPPSTLMTGTTTQVMIDI ADKIYVGDKGQTPPPGRLVQMAINVAAFALGCGAAALLFVRLGSWCFVIPPIVAALTLVARMAGPQPAR >Mature_228_residues ATTEQRIVPLLLSVNAGYVDTAGFLALQGLFTAHVTGNFVTFGAALALGTSGAIAKLLALPVFCVVVIATRLTGTLLSRR WSRVFEILITVKLLLLILGAALAIHFGPFHNGDSHEAILTGMVLVAAMAIQNAVHRIHLPTAPPSTLMTGTTTQVMIDIA DKIYVGDKGQTPPPGRLVQMAINVAAFALGCGAAALLFVRLGSWCFVIPPIVAALTLVARMAGPQPAR
Specific function: Unknown
COG id: COG3619
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23956; Mature: 23825
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTEQRIVPLLLSVNAGYVDTAGFLALQGLFTAHVTGNFVTFGAALALGTSGAIAKLLA CCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH LPVFCVVVIATRLTGTLLSRRWSRVFEILITVKLLLLILGAALAIHFGPFHNGDSHEAIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH TGMVLVAAMAIQNAVHRIHLPTAPPSTLMTGTTTQVMIDIADKIYVGDKGQTPPPGRLVQ HHHHHHHHHHHHHHHHEEECCCCCCCCEECCCHHHHHEEHHHHEEECCCCCCCCCHHHHH MAINVAAFALGCGAAALLFVRLGSWCFVIPPIVAALTLVARMAGPQPAR HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ATTEQRIVPLLLSVNAGYVDTAGFLALQGLFTAHVTGNFVTFGAALALGTSGAIAKLLA CCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH LPVFCVVVIATRLTGTLLSRRWSRVFEILITVKLLLLILGAALAIHFGPFHNGDSHEAIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH TGMVLVAAMAIQNAVHRIHLPTAPPSTLMTGTTTQVMIDIADKIYVGDKGQTPPPGRLVQ HHHHHHHHHHHHHHHHEEECCCCCCCCEECCCHHHHHEEHHHHEEECCCCCCCCCHHHHH MAINVAAFALGCGAAALLFVRLGSWCFVIPPIVAALTLVARMAGPQPAR HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA