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The map label for this gene is bphR [H]

Identifier: 146341978

GI number: 146341978

Start: 5311419

End: 5312132

Strand: Reverse

Name: bphR [H]

Synonym: BRADO5114

Alternate gene names: 146341978

Gene position: 5312132-5311419 (Counterclockwise)

Preceding gene: 146341983

Following gene: 146341976

Centisome position: 71.24

GC content: 67.65

Gene sequence:

>714_bases
GTGGACGCGGTGATCGAGGTCGACGGGCAGGGTCCGTCGACCCAGGCAAGCCATGTGTATGACCGGCTGCGCGAGGACCT
GCTGTCCGGGCGGCTCGCGCCGTCGCGCAAGCTGCAGATGCGCTTCCTCACGGAGGCATATCAGACCGGCCAGACGCCGC
TCCGCGAGGCGCTCAACCGCCTCACGGCCGATGGACTGGTGGAGGTGCGCGAGCAGCGCGGCTTCTACGTCAAGGACATC
AGCCGTGCCGAACTCGCCGAGCTGACCAAGACGCGCTGCTGGGTCGAGGCGCTGGCGCTGCGCGAATCGATGAAGGCGGC
GACGCCGCCATGGGAGGAGCAGCTGGTGCTGGCGCAGCATCGCCTCAGCCGCGCGCCGCGCTCGCTCAGCGCCACCACCT
TCGAGGACAATCCGGAGTGGGAAAAGCTGCACCGCATCTATCACCGCGTCCTGATCGCGAACTGCGGCTCGCAATCGCTC
GTAGCGTTTTGCGGCCAGCTCGCCGACCAGCTTTACCGTTACCGCCGGCTCTCGATCCGCAAGGCGTTCCCCTCACGCGC
GGTCGGCGACGAGCACGCCGCGATCGTCAATGCTGTCCTGAACGCGGATGTCGAGGGCGCGGTCGCGCTGCTGACTGCGC
ACTACCAGCGCACGGCTGACGTCATCCTGCAGGACGAGACGATCTTTCCGGAGCTGAAGGCGAACGGCGGATAG

Upstream 100 bases:

>100_bases
CCTTTTATTACATAAAAAATCGGAATCAATCATAATTTATAAATTTCATGTTTAGAGGCTAAGCCCTATACATAGGCGAC
GATTCCGAGGGAGATCGAAC

Downstream 100 bases:

>100_bases
GGCTGGGTCGCGACGCCTCTTGCATCCCCCATATCTTCAGAGATGCGCCGTCTCTCTCCCTTCATTCCGGGGCTCGCGCA
GCGATAGCCCGGAATCCATA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MDAVIEVDGQGPSTQASHVYDRLREDLLSGRLAPSRKLQMRFLTEAYQTGQTPLREALNRLTADGLVEVREQRGFYVKDI
SRAELAELTKTRCWVEALALRESMKAATPPWEEQLVLAQHRLSRAPRSLSATTFEDNPEWEKLHRIYHRVLIANCGSQSL
VAFCGQLADQLYRYRRLSIRKAFPSRAVGDEHAAIVNAVLNADVEGAVALLTAHYQRTADVILQDETIFPELKANGG

Sequences:

>Translated_237_residues
MDAVIEVDGQGPSTQASHVYDRLREDLLSGRLAPSRKLQMRFLTEAYQTGQTPLREALNRLTADGLVEVREQRGFYVKDI
SRAELAELTKTRCWVEALALRESMKAATPPWEEQLVLAQHRLSRAPRSLSATTFEDNPEWEKLHRIYHRVLIANCGSQSL
VAFCGQLADQLYRYRRLSIRKAFPSRAVGDEHAAIVNAVLNADVEGAVALLTAHYQRTADVILQDETIFPELKANGG
>Mature_237_residues
MDAVIEVDGQGPSTQASHVYDRLREDLLSGRLAPSRKLQMRFLTEAYQTGQTPLREALNRLTADGLVEVREQRGFYVKDI
SRAELAELTKTRCWVEALALRESMKAATPPWEEQLVLAQHRLSRAPRSLSATTFEDNPEWEKLHRIYHRVLIANCGSQSL
VAFCGQLADQLYRYRRLSIRKAFPSRAVGDEHAAIVNAVLNADVEGAVALLTAHYQRTADVILQDETIFPELKANGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082149, Length=209, Percent_Identity=31.1004784688995, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26642; Mature: 26642

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAVIEVDGQGPSTQASHVYDRLREDLLSGRLAPSRKLQMRFLTEAYQTGQTPLREALNR
CCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
LTADGLVEVREQRGFYVKDISRAELAELTKTRCWVEALALRESMKAATPPWEEQLVLAQH
HHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RLSRAPRSLSATTFEDNPEWEKLHRIYHRVLIANCGSQSLVAFCGQLADQLYRYRRLSIR
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KAFPSRAVGDEHAAIVNAVLNADVEGAVALLTAHYQRTADVILQDETIFPELKANGG
HHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDAVIEVDGQGPSTQASHVYDRLREDLLSGRLAPSRKLQMRFLTEAYQTGQTPLREALNR
CCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
LTADGLVEVREQRGFYVKDISRAELAELTKTRCWVEALALRESMKAATPPWEEQLVLAQH
HHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RLSRAPRSLSATTFEDNPEWEKLHRIYHRVLIANCGSQSLVAFCGQLADQLYRYRRLSIR
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KAFPSRAVGDEHAAIVNAVLNADVEGAVALLTAHYQRTADVILQDETIFPELKANGG
HHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1569021 [H]