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The map label for this gene is 146341976

Identifier: 146341976

GI number: 146341976

Start: 5309871

End: 5310299

Strand: Reverse

Name: 146341976

Synonym: BRADO5112

Alternate gene names: NA

Gene position: 5310299-5309871 (Counterclockwise)

Preceding gene: 146341978

Following gene: 146341971

Centisome position: 71.22

GC content: 67.37

Gene sequence:

>429_bases
ATGCATCGGATGTTGCGCCTTTCGCTGCTCGCCTGCGCTGCCCTGCTGTCGGCCGCACCTCTGGCGCACGCCGAGATGAT
CATGCTGAAGTCCGAGCTCAAGGCGGCGAACGAGGTGCCGCCCAATGCGAGCACCGCGTCTGGCGCGGCGGAAGCGAGCT
TCGACACGTCCACCAAGACCCTGACCTGGAAGGTCACCTTCTCGGGCCTCAGCGGGCCGCCGATCGGGGCGCATTTTCAT
GGTCCGAGCGAGCCCGGCAAGACCGCCGGCATCGTGCTGCCGTTCAAGAGCCCGGAGCCGCCGATCACCGGTGCGGCCGC
GCTCACCGATGCGCAGGCAGCCGATCTGCTGGCCGGCAAATGGTACGCCAACATCCACACCCAGGCCAATCCGGGCGGCG
AGATCCGCGGACAGATGACCAGGCAATAG

Upstream 100 bases:

>100_bases
GCGAGAGTTCAATCAAGGCCGTCAGCGTCCTACCCGCGGAATATCAGCTTGCCTGCGGGGTCCTTCGACTTCAGACTGCG
GAAAAAGGACGGGGGAAATC

Downstream 100 bases:

>100_bases
CGGCAGACCTCAGGCCGCCAACTCCGGCTTCGTGACTCGCGCGACTGTCGCGGAGGCGCGGCGCACGTCGAGGAACTGCT
TGAAGCGGTCGAGCGACATC

Product: putative signal peptide

Products: NA

Alternate protein names: CHRD Domain Containing Protein; Signal Peptide; CHRD Domain-Containing Superfamily; Chordin

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MHRMLRLSLLACAALLSAAPLAHAEMIMLKSELKAANEVPPNASTASGAAEASFDTSTKTLTWKVTFSGLSGPPIGAHFH
GPSEPGKTAGIVLPFKSPEPPITGAAALTDAQAADLLAGKWYANIHTQANPGGEIRGQMTRQ

Sequences:

>Translated_142_residues
MHRMLRLSLLACAALLSAAPLAHAEMIMLKSELKAANEVPPNASTASGAAEASFDTSTKTLTWKVTFSGLSGPPIGAHFH
GPSEPGKTAGIVLPFKSPEPPITGAAALTDAQAADLLAGKWYANIHTQANPGGEIRGQMTRQ
>Mature_142_residues
MHRMLRLSLLACAALLSAAPLAHAEMIMLKSELKAANEVPPNASTASGAAEASFDTSTKTLTWKVTFSGLSGPPIGAHFH
GPSEPGKTAGIVLPFKSPEPPITGAAALTDAQAADLLAGKWYANIHTQANPGGEIRGQMTRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14698; Mature: 14698

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: PS50933 CHRD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRMLRLSLLACAALLSAAPLAHAEMIMLKSELKAANEVPPNASTASGAAEASFDTSTKT
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE
LTWKVTFSGLSGPPIGAHFHGPSEPGKTAGIVLPFKSPEPPITGAAALTDAQAADLLAGK
EEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCHHHHHHHCC
WYANIHTQANPGGEIRGQMTRQ
EEEEEECCCCCCCCCCCEECCC
>Mature Secondary Structure
MHRMLRLSLLACAALLSAAPLAHAEMIMLKSELKAANEVPPNASTASGAAEASFDTSTKT
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE
LTWKVTFSGLSGPPIGAHFHGPSEPGKTAGIVLPFKSPEPPITGAAALTDAQAADLLAGK
EEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCHHHHHHHCC
WYANIHTQANPGGEIRGQMTRQ
EEEEEECCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA