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The map label for this gene is yrbE [C]

Identifier: 146341950

GI number: 146341950

Start: 5283077

End: 5284210

Strand: Reverse

Name: yrbE [C]

Synonym: BRADO5086

Alternate gene names: 146341950

Gene position: 5284210-5283077 (Counterclockwise)

Preceding gene: 146341952

Following gene: 146341949

Centisome position: 70.87

GC content: 66.58

Gene sequence:

>1134_bases
GTGACGGGCAGCCCTGATCTGCAACGCAGCGGTGAAGGCAATGCGCTGGCGCTGCGTGCGACCGGCGCCTGGACCGCGCC
GTTCGCGCCGGCGCTCGAACGCCTGGTCGCCGATGCCGAGAAGCTCGCCGGCAAGTCCGGCAATGTGTCGATCGACGTCT
CGCAGGTCTCCAAGCTCGACACGTTCGGCGCCTGGCTGATCGAGCGGCTGCGCCGCAGCTTCACGACCGGAACGGTCGAG
GCCAGGATCGACGGGCTGTCCGCCAACTACGCGAGCCTGGTGGATGAGGTCCGCCGCGTCAGCCTCGCCCCCGGTGACGA
TGCGACCAACGTGACCATCACCGGCATGCTCGGGCAGATCGGCCGCAGCGTCGCGGGCATCGTGGGCACGGTCGCGGCGC
TGATCGACATGCTCGGCGCGGTGATCGTCGCCAGTGGCCGCGTGCTCGTGCATCCGCGCAGCTTCCGGCTGACCTCGACC
ATTCATCACCTGGAGCAGGTGTGCTGGCGGGCGGTGCCCATCATCGTCCTTATCACGTTCCTGATCGGCTGCATCATCGC
CCAGCAGGGCATCTTCCATTTCCGCCGGTTCGGCGCCGACATCTTCGTCGTCGACATGCTCGGCGTGCTGGTGCTGCGCG
AGATCGGCGTGCTGCTGGTCGCGATCATGATCGCGGGCCGGTCGGGCAGCGCCTACACCGCCGAGCTCGGCTCGATGAAG
ATGCGTGAGGAGATCGATGCGCTGCGCACCATGGGCTTCGATCCGATCGAGGTGCTGATCCTGCCGCGCATGCTGGCGCT
GGTGATCGCGCTGCCGATCCTGTCCTTCCTCGGCGACATCGCCGCGCTCTATGGCGGCGGGCTGGTGGCATGGTTCTATG
GCGGCGTCGATCCCGAAGCTTTCCTGCTGCGTCTGCGCGATGCGATCTCGATCGATCATTTCACCGTCGGCCTGCTCAAG
GCGCCGGTCATGGCGGCCGTGATCGGCATCGTTGCCTGCGTAGAGGGTCTGGCAGTGGAGGGCAGCGCCGAATCGCTCGG
GCGCCATACAACTTCGTCGGTCGTGAAGGGCATCTTCTTCGTCATCGTGATGGACGGCGTGTTCGCGATCTTCTTCGCCG
CGGTCGGGATGTAA

Upstream 100 bases:

>100_bases
GGACTATGGCTGTTGATAGGGGTCTCCGGCAAGGTGGTGGCGACGCGGTGGGATTGTTCTCGTCCAGGAGCGGATATCCG
CAGCTCCGAGGTTGGTCGTC

Downstream 100 bases:

>100_bases
ACTGAGATGATCCAGGCCGTGTCCGATCCGATCATCCGCGTGCGCGATGTCACCGTGCAGTTCGGCAAGACGCGCGTGCT
CGATGGCCTCGACCTCGACG

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MTGSPDLQRSGEGNALALRATGAWTAPFAPALERLVADAEKLAGKSGNVSIDVSQVSKLDTFGAWLIERLRRSFTTGTVE
ARIDGLSANYASLVDEVRRVSLAPGDDATNVTITGMLGQIGRSVAGIVGTVAALIDMLGAVIVASGRVLVHPRSFRLTST
IHHLEQVCWRAVPIIVLITFLIGCIIAQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMK
MREEIDALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFLLRLRDAISIDHFTVGLLK
APVMAAVIGIVACVEGLAVEGSAESLGRHTTSSVVKGIFFVIVMDGVFAIFFAAVGM

Sequences:

>Translated_377_residues
MTGSPDLQRSGEGNALALRATGAWTAPFAPALERLVADAEKLAGKSGNVSIDVSQVSKLDTFGAWLIERLRRSFTTGTVE
ARIDGLSANYASLVDEVRRVSLAPGDDATNVTITGMLGQIGRSVAGIVGTVAALIDMLGAVIVASGRVLVHPRSFRLTST
IHHLEQVCWRAVPIIVLITFLIGCIIAQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMK
MREEIDALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFLLRLRDAISIDHFTVGLLK
APVMAAVIGIVACVEGLAVEGSAESLGRHTTSSVVKGIFFVIVMDGVFAIFFAAVGM
>Mature_376_residues
TGSPDLQRSGEGNALALRATGAWTAPFAPALERLVADAEKLAGKSGNVSIDVSQVSKLDTFGAWLIERLRRSFTTGTVEA
RIDGLSANYASLVDEVRRVSLAPGDDATNVTITGMLGQIGRSVAGIVGTVAALIDMLGAVIVASGRVLVHPRSFRLTSTI
HHLEQVCWRAVPIIVLITFLIGCIIAQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMKM
REEIDALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFLLRLRDAISIDHFTVGLLKA
PVMAAVIGIVACVEGLAVEGSAESLGRHTTSSVVKGIFFVIVMDGVFAIFFAAVGM

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=209, Percent_Identity=29.1866028708134, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 39937; Mature: 39805

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSPDLQRSGEGNALALRATGAWTAPFAPALERLVADAEKLAGKSGNVSIDVSQVSKLD
CCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH
TFGAWLIERLRRSFTTGTVEARIDGLSANYASLVDEVRRVSLAPGDDATNVTITGMLGQI
HHHHHHHHHHHHHHCCCCHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHH
GRSVAGIVGTVAALIDMLGAVIVASGRVLVHPRSFRLTSTIHHLEQVCWRAVPIIVLITF
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGCIIAQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
MREEIDALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHCCCCCHHH
FLLRLRDAISIDHFTVGLLKAPVMAAVIGIVACVEGLAVEGSAESLGRHTTSSVVKGIFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHH
VIVMDGVFAIFFAAVGM
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGSPDLQRSGEGNALALRATGAWTAPFAPALERLVADAEKLAGKSGNVSIDVSQVSKLD
CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH
TFGAWLIERLRRSFTTGTVEARIDGLSANYASLVDEVRRVSLAPGDDATNVTITGMLGQI
HHHHHHHHHHHHHHCCCCHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHH
GRSVAGIVGTVAALIDMLGAVIVASGRVLVHPRSFRLTSTIHHLEQVCWRAVPIIVLITF
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGCIIAQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
MREEIDALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHCCCCCHHH
FLLRLRDAISIDHFTVGLLKAPVMAAVIGIVACVEGLAVEGSAESLGRHTTSSVVKGIFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHH
VIVMDGVFAIFFAAVGM
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA