| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is oxlT [H]
Identifier: 146341835
GI number: 146341835
Start: 5155662
End: 5156981
Strand: Direct
Name: oxlT [H]
Synonym: BRADO4964
Alternate gene names: 146341835
Gene position: 5155662-5156981 (Clockwise)
Preceding gene: 146341834
Following gene: 146341836
Centisome position: 69.14
GC content: 65.45
Gene sequence:
>1320_bases ATGGTTTCCAGCACAGAGGCGTCACCGCCCACCCCGCCGCAGTCGAGCGGCTTCCGGTGGATCCAGCTCGCGATGGGCAT CGTCTGCATGGCGATGATCGCCAACCTTCAGTATGGCTGGACGCTGTTCGTCGATCCGATCGACGCGAAATTCCACTGGG GCCGCACGGCCATCCAATTGGCGTTCACGATCTTCGTCGTCACCGAGACCTGGCTGGTGCCGGTCGAGGCCTGGTTCGTC GACAAATACGGCCCGCGCGTCGTGATCATGTTCGGCGGCGTGATGATCGCGTTGGCCTGGGTGCTCAACTCCTATGCCGA CTCGCTCACCCTGCTCTACGCGGGCGCCGTGATCGGCGGCATCGGGGCCGGCGCGGTCTACGGCACTTGCGTCGGCAATG CGCTGAAATGGTTTCCCGACCGCCGCGGCCTCGCCGCCGGCGCTACCGCCGCCGGCTTCGGCGCGGGCGCCGCGCTGACC GTCGTGCCGATCGCCAGCATGATCGCCTCGAGCGGTTATCAGTCCGCCTTCTTCACCTTCGGCATCGGCCAAGGTGTCGT CGTCTTCATCCTCGCACTCTTCCTGCGGCCGCCGACCAAGGCGGCCCCGGCCCGCAAGAAGCAGCTCAACCTGCCGCAGA GCAAGATCGATTACACGCCGCCGCAGGTGCTGCGCACGCCGATCTTCTGGATCATGTATCTCGTGTTCGTGATGGTCGCC TCCGGTGGCTTGATGACGGCGGCTCAGATCGCCCCGATCGCGCACGACTTCAAGATCGCCAACGAGCCGGTGACGCTCGC CGGCTTCCAGATGGCGGCGCTGACCTTCGCGATCTCGCTCGACCGCATCTTCGACGGCTTCGGCCGTCCATTGTTCGGCT GGATCTCGGACACGATCGGCCGCGAGCACACCATGTTCATCGCCTTCGGCACCGCGGCGCTGATGCTGCTGACCTTGTCG AACTACGGGCAGAACCCGATCGTGTTCGTGCTCGCCACAGCCGTCTATTTCGGCGTCTTCGGCGAGATCTACAGCCTGTT CCCGGCGACATCGGGCGATACGTTCGGCAGCAAGTACGCCGCGACCAACAACGGCATGCTCTACACTGCGAAGGGCACCG CCTCGCTGCTGGTGCCGCTCGCGAGCCTCGTCTCTGCAAAATATGGCTGGCAGGCCGTGTTCGTGATCGGCGTCGCGCTG AATGCCACGGCGGCGCTGATGGCGCTGTTCGTGATCAAGCCACTGCGCCGCGCCTTCATCCTCGGCAAGGAGGCGGCGGT CACCCAGTCCGCCGCTCAGGACGTCCGCACCACGGCTTAG
Upstream 100 bases:
>100_bases TGCGGGCTGGAATATATTATACCAAGATGACCAGATGCGCAGATGAGGAGCCGGCTGCTTGCACCGGCATCCTCCAAGAG AGCGCGGTTTGGGAGGATTT
Downstream 100 bases:
>100_bases TCGACAGCTTCTTCCCACGACTCGAGGAGGCGCATCCCGGTGCGCCTCCTTTTTTTGACGCCAGGAATGCCAGATGCCAC CCGTGATCCCGACATCGGGC
Product: putative oxalate/formate antiporter
Products: NA
Alternate protein names: OFA; Oxalate:formate antiport protein; Oxalate:formate exchange protein [H]
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MVSSTEASPPTPPQSSGFRWIQLAMGIVCMAMIANLQYGWTLFVDPIDAKFHWGRTAIQLAFTIFVVTETWLVPVEAWFV DKYGPRVVIMFGGVMIALAWVLNSYADSLTLLYAGAVIGGIGAGAVYGTCVGNALKWFPDRRGLAAGATAAGFGAGAALT VVPIASMIASSGYQSAFFTFGIGQGVVVFILALFLRPPTKAAPARKKQLNLPQSKIDYTPPQVLRTPIFWIMYLVFVMVA SGGLMTAAQIAPIAHDFKIANEPVTLAGFQMAALTFAISLDRIFDGFGRPLFGWISDTIGREHTMFIAFGTAALMLLTLS NYGQNPIVFVLATAVYFGVFGEIYSLFPATSGDTFGSKYAATNNGMLYTAKGTASLLVPLASLVSAKYGWQAVFVIGVAL NATAALMALFVIKPLRRAFILGKEAAVTQSAAQDVRTTA
Sequences:
>Translated_439_residues MVSSTEASPPTPPQSSGFRWIQLAMGIVCMAMIANLQYGWTLFVDPIDAKFHWGRTAIQLAFTIFVVTETWLVPVEAWFV DKYGPRVVIMFGGVMIALAWVLNSYADSLTLLYAGAVIGGIGAGAVYGTCVGNALKWFPDRRGLAAGATAAGFGAGAALT VVPIASMIASSGYQSAFFTFGIGQGVVVFILALFLRPPTKAAPARKKQLNLPQSKIDYTPPQVLRTPIFWIMYLVFVMVA SGGLMTAAQIAPIAHDFKIANEPVTLAGFQMAALTFAISLDRIFDGFGRPLFGWISDTIGREHTMFIAFGTAALMLLTLS NYGQNPIVFVLATAVYFGVFGEIYSLFPATSGDTFGSKYAATNNGMLYTAKGTASLLVPLASLVSAKYGWQAVFVIGVAL NATAALMALFVIKPLRRAFILGKEAAVTQSAAQDVRTTA >Mature_439_residues MVSSTEASPPTPPQSSGFRWIQLAMGIVCMAMIANLQYGWTLFVDPIDAKFHWGRTAIQLAFTIFVVTETWLVPVEAWFV DKYGPRVVIMFGGVMIALAWVLNSYADSLTLLYAGAVIGGIGAGAVYGTCVGNALKWFPDRRGLAAGATAAGFGAGAALT VVPIASMIASSGYQSAFFTFGIGQGVVVFILALFLRPPTKAAPARKKQLNLPQSKIDYTPPQVLRTPIFWIMYLVFVMVA SGGLMTAAQIAPIAHDFKIANEPVTLAGFQMAALTFAISLDRIFDGFGRPLFGWISDTIGREHTMFIAFGTAALMLLTLS NYGQNPIVFVLATAVYFGVFGEIYSLFPATSGDTFGSKYAATNNGMLYTAKGTASLLVPLASLVSAKYGWQAVFVIGVAL NATAALMALFVIKPLRRAFILGKEAAVTQSAAQDVRTTA
Specific function: Anion transporter that carries out the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation, at the plasma membrane, and in doing so catalyzes the vectorial portion of a proton-motive metabolic cycle that drives ATP
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. OFA (TC 2.A.1.11) family [H]
Homologues:
Organism=Escherichia coli, GI1789969, Length=385, Percent_Identity=23.8961038961039, Blast_Score=105, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46794; Mature: 46794
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS00962 RIBOSOMAL_S2_1 ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSSTEASPPTPPQSSGFRWIQLAMGIVCMAMIANLQYGWTLFVDPIDAKFHWGRTAIQL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCHHHHHH AFTIFVVTETWLVPVEAWFVDKYGPRVVIMFGGVMIALAWVLNSYADSLTLLYAGAVIGG HHHHHEEHHHHEEEEHHEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IGAGAVYGTCVGNALKWFPDRRGLAAGATAAGFGAGAALTVVPIASMIASSGYQSAFFTF CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE GIGQGVVVFILALFLRPPTKAAPARKKQLNLPQSKIDYTPPQVLRTPIFWIMYLVFVMVA ECCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH SGGLMTAAQIAPIAHDFKIANEPVTLAGFQMAALTFAISLDRIFDGFGRPLFGWISDTIG CCCCCHHHHHHHHHHCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC REHTMFIAFGTAALMLLTLSNYGQNPIVFVLATAVYFGVFGEIYSLFPATSGDTFGSKYA CCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE ATNNGMLYTAKGTASLLVPLASLVSAKYGWQAVFVIGVALNATAALMALFVIKPLRRAFI ECCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH LGKEAAVTQSAAQDVRTTA CCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MVSSTEASPPTPPQSSGFRWIQLAMGIVCMAMIANLQYGWTLFVDPIDAKFHWGRTAIQL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCHHHHHH AFTIFVVTETWLVPVEAWFVDKYGPRVVIMFGGVMIALAWVLNSYADSLTLLYAGAVIGG HHHHHEEHHHHEEEEHHEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IGAGAVYGTCVGNALKWFPDRRGLAAGATAAGFGAGAALTVVPIASMIASSGYQSAFFTF CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE GIGQGVVVFILALFLRPPTKAAPARKKQLNLPQSKIDYTPPQVLRTPIFWIMYLVFVMVA ECCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH SGGLMTAAQIAPIAHDFKIANEPVTLAGFQMAALTFAISLDRIFDGFGRPLFGWISDTIG CCCCCHHHHHHHHHHCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC REHTMFIAFGTAALMLLTLSNYGQNPIVFVLATAVYFGVFGEIYSLFPATSGDTFGSKYA CCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE ATNNGMLYTAKGTASLLVPLASLVSAKYGWQAVFVIGVALNATAALMALFVIKPLRRAFI ECCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH LGKEAAVTQSAAQDVRTTA CCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8636101; 9651403; 11919184; 11113128; 11274108; 11500368 [H]