| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341738
Identifier: 146341738
GI number: 146341738
Start: 5057671
End: 5058660
Strand: Reverse
Name: 146341738
Synonym: BRADO4853
Alternate gene names: NA
Gene position: 5058660-5057671 (Counterclockwise)
Preceding gene: 146341739
Following gene: 146341737
Centisome position: 67.84
GC content: 64.75
Gene sequence:
>990_bases ATGGCCTGGCAGTCGGAATCGATCATGGCCCGCAAGGGCTTGGCCAAGGGCGCACGCGGCGCGCACCATCTCATCACCGA GCAGGACCAGGGCAAGTACCACTACGTGTACGGCCCCTATGTCGATCCGGTGCTGATCATCGATCCTGGCGCCGTCGTCT CGGCCGAGACGCATGATGCGTTCGAGGGCGCGATCAAGCACGAGACCGACAGCCCGTCCAAGATCCTGAACTTCCCGTTC CTCAATCCGCAGAACGGCCCGATCTACGTCAACGGCGCCGAGAAGGGCGATACGCTCGCAGTATACATCGAGAGCATCGT GCCGCGCGGGCCGCAGCCGCGCGGCACCACCGTGATCATGCCGGAGTTCGGCGGGCTGGTCGGAACGGGCAACACCGCGC TGCTCAATCCGGCGCTGCCGGAGCGGGTCAAGAAGCTGGAGATCACGGCCGAGAAGGGCACGGTCTGGAACGACAGGATC ACACTTCCCTATGAGCCGTTCATCGGCACCATCGGCACCTCGCCGGAGATCGAGGCGATCTCCTCGCTCGTGCCCGACTA CTACGGCGGCAACATGGACCTGCCGGATGTCGGCACCGGCGCGATCATCTATCTGCCGGTCAACACCAAGGGGGCGCTGC TCTATCTCGGCGACTGTCACGCCGCGCAGGGCGACGGCGAATTGTGCGGCGTCGCGATCGAGCATCCGACCGTCACGACG GTGCAGGTCGATCTCATCAAGAACTGGACCATCGCCTGGCCGCGGCTCGAGACCCGGGACTTCATCATGACCATCGGCTC GGCCCGGCCGATGGAGGATGCGGCGCGCATCGCCTATCGCGAGCTGTGCCGCTGGATGGCCGCTGATTACGGGTTCGACG AGATCGACGCCTACATGCTGCTGACGCAGGCCGGGCGTGTCCGGCTCGGCAACATGGTCGATCCGAAATACACGCTCGGC GCCTCCATCAAGAAGCACTTCCTGGTCTGA
Upstream 100 bases:
>100_bases ATCACCGCGAGCCTCGCGCGCGAAGCGCTCGACGATGCCGCCGAGATGCGCCGCCACCTTGCAGTCTGAAGAAACGCAAA TGAGCACAAGGAGAACGAGC
Downstream 100 bases:
>100_bases GGTCGCCGACAATGCCGATGACGTACAAGGCCGCGACCGTCCAGTTCGAGCCTGTTCTGGCCGGGAAGGAGCGCAACATC GAAGGCCTGCTCGCGCTGTG
Product: putative acetamidase/formamidase family protein
Products: NA
Alternate protein names: Acetamidase/Formamidase Family Protein; Formamidase; Acetamidase; Amidase; Acetamidase/Formamidase Family; Transcriptional Regulator; AraC Family Transcriptional Regulator; Acetamidase/Formamidase Protein; Amidase-Related Protein; Amidae; Twin-Arginine Translocation Pathway Signal; Formamidase/Acetamidase; Transcriptional Regulatory Protein; Transcription Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MAWQSESIMARKGLAKGARGAHHLITEQDQGKYHYVYGPYVDPVLIIDPGAVVSAETHDAFEGAIKHETDSPSKILNFPF LNPQNGPIYVNGAEKGDTLAVYIESIVPRGPQPRGTTVIMPEFGGLVGTGNTALLNPALPERVKKLEITAEKGTVWNDRI TLPYEPFIGTIGTSPEIEAISSLVPDYYGGNMDLPDVGTGAIIYLPVNTKGALLYLGDCHAAQGDGELCGVAIEHPTVTT VQVDLIKNWTIAWPRLETRDFIMTIGSARPMEDAARIAYRELCRWMAADYGFDEIDAYMLLTQAGRVRLGNMVDPKYTLG ASIKKHFLV
Sequences:
>Translated_329_residues MAWQSESIMARKGLAKGARGAHHLITEQDQGKYHYVYGPYVDPVLIIDPGAVVSAETHDAFEGAIKHETDSPSKILNFPF LNPQNGPIYVNGAEKGDTLAVYIESIVPRGPQPRGTTVIMPEFGGLVGTGNTALLNPALPERVKKLEITAEKGTVWNDRI TLPYEPFIGTIGTSPEIEAISSLVPDYYGGNMDLPDVGTGAIIYLPVNTKGALLYLGDCHAAQGDGELCGVAIEHPTVTT VQVDLIKNWTIAWPRLETRDFIMTIGSARPMEDAARIAYRELCRWMAADYGFDEIDAYMLLTQAGRVRLGNMVDPKYTLG ASIKKHFLV >Mature_328_residues AWQSESIMARKGLAKGARGAHHLITEQDQGKYHYVYGPYVDPVLIIDPGAVVSAETHDAFEGAIKHETDSPSKILNFPFL NPQNGPIYVNGAEKGDTLAVYIESIVPRGPQPRGTTVIMPEFGGLVGTGNTALLNPALPERVKKLEITAEKGTVWNDRIT LPYEPFIGTIGTSPEIEAISSLVPDYYGGNMDLPDVGTGAIIYLPVNTKGALLYLGDCHAAQGDGELCGVAIEHPTVTTV QVDLIKNWTIAWPRLETRDFIMTIGSARPMEDAARIAYRELCRWMAADYGFDEIDAYMLLTQAGRVRLGNMVDPKYTLGA SIKKHFLV
Specific function: Unknown
COG id: COG2421
COG function: function code C; Predicted acetamidase/formamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35902; Mature: 35771
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWQSESIMARKGLAKGARGAHHLITEQDQGKYHYVYGPYVDPVLIIDPGAVVSAETHDA CCCCCCCHHHHHHHCCCCCCCHHCCCCCCCCCEEEEECCCCCEEEEECCCCEEECCCCHH FEGAIKHETDSPSKILNFPFLNPQNGPIYVNGAEKGDTLAVYIESIVPRGPQPRGTTVIM HHHHHCCCCCCCHHEEECCCCCCCCCEEEEECCCCCCEEEEEEEHHCCCCCCCCCCEEEE PEFGGLVGTGNTALLNPALPERVKKLEITAEKGTVWNDRITLPYEPFIGTIGTSPEIEAI ECCCCEEECCCCEEECCHHHHHHHEEEEEECCCCEECCEEECCCCCCEECCCCCCHHHHH SSLVPDYYGGNMDLPDVGTGAIIYLPVNTKGALLYLGDCHAAQGDGELCGVAIEHPTVTT HHHCCHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCEEEE VQVDLIKNWTIAWPRLETRDFIMTIGSARPMEDAARIAYRELCRWMAADYGFDEIDAYML EEEEEECCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHEEE LTQAGRVRLGNMVDPKYTLGASIKKHFLV EECCCCEEECCCCCCCCHHCCHHHHHCCC >Mature Secondary Structure AWQSESIMARKGLAKGARGAHHLITEQDQGKYHYVYGPYVDPVLIIDPGAVVSAETHDA CCCCCCHHHHHHHCCCCCCCHHCCCCCCCCCEEEEECCCCCEEEEECCCCEEECCCCHH FEGAIKHETDSPSKILNFPFLNPQNGPIYVNGAEKGDTLAVYIESIVPRGPQPRGTTVIM HHHHHCCCCCCCHHEEECCCCCCCCCEEEEECCCCCCEEEEEEEHHCCCCCCCCCCEEEE PEFGGLVGTGNTALLNPALPERVKKLEITAEKGTVWNDRITLPYEPFIGTIGTSPEIEAI ECCCCEEECCCCEEECCHHHHHHHEEEEEECCCCEECCEEECCCCCCEECCCCCCHHHHH SSLVPDYYGGNMDLPDVGTGAIIYLPVNTKGALLYLGDCHAAQGDGELCGVAIEHPTVTT HHHCCHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCEEEE VQVDLIKNWTIAWPRLETRDFIMTIGSARPMEDAARIAYRELCRWMAADYGFDEIDAYML EEEEEECCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHEEE LTQAGRVRLGNMVDPKYTLGASIKKHFLV EECCCCEEECCCCCCCCHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA