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The map label for this gene is ycjS [H]

Identifier: 146341720

GI number: 146341720

Start: 5028508

End: 5029548

Strand: Reverse

Name: ycjS [H]

Synonym: BRADO4825

Alternate gene names: 146341720

Gene position: 5029548-5028508 (Counterclockwise)

Preceding gene: 146341721

Following gene: 146341719

Centisome position: 67.45

GC content: 66.57

Gene sequence:

>1041_bases
ATGAAGGCCGCGCTCATCGGAGCCGGGCAGATCGCCCGACAGCATCTGACCTGCCTCAGCACGCTCCCAGGCGTGCAACT
CGCCGCGATCTGCGATCTGTCGCCGGCGACCGCGGAAGCCGCTGCCGAGCGCCACGCGATCCCGTCCTGGTTCACCGATC
ACCGCGAGATGCTGCGAACCGTGCAGCCTGATGTCGTGCATGTCACGACGCCGCCGACCTCGCATTTCCGTCTCGCGATG
GATGCGCTCGAGGCCGGCGCGCATGTGATCGTGGAGAAGCCGGCGACCTCGACCTTCGAGGAGCTGCAGACCCTGACACT
GCGAGCAAAGCAGACAGGACGTTACGTCGTCGAGGATTACAACTACGTCTTCAATCATGCGCCGCAGGAGATCCTGCGCA
AGATCGAGACCGGTGAGTTCGGCGCCGTTACGCATGTCGACATTCTGATCTGCCTGGACATCCTCGGTCCCGACGGCTTT
GCCGACCCGAACGCGCCGCATCCGGCGCTCAAGCTCGCCGGCGGCGCGATCGCCGACTTCCTGCCGCATCTCGCCTCGTT
GTCGCATGCTTTCGTCGGCCCGCACCGGACTGCGCAGACGGTGTGGAGCAAGCGCAAGCCGTCGCCGCTGCCGTTCGACG
AGTTTCGCAGCGTCATCGAGGCCGAGCGCGGCACCGCGACGCTCGGCTTCAGCGCCAGCGCCCAGCCCGACGCGTTCTGG
CTGCGCGTCTATGGCGAGCGGATGCAGGCCACCGCCAATCTGTTCGAGACGCGGCTCACCTTCGACGGACCGCGCAATGT
GCCGAAGCCGCTGCGCCCGTTCTTCAGCGGATTGGACGAAGGCCGCGACATCCGGCGAGCCGCGCTGTCGACGCTGTTGC
GCAAGTTCAAGGGGCCGGGCGCCTATGAGGGGCTTTGGGCGTGCCTGTCGCGCACCTATCAGGCGCTGGCGGCGAGGGCG
ACCTTGCCGATCACGGTCGAGGACGTGCTGTCGGTCAACCGGATGGTCGAAGCGATGAAGCCGAGGGAACAGGTCGCATG
A

Upstream 100 bases:

>100_bases
GCAGCGCCGCACGGCAGGTCGCCGTCGACAAATACGCCTGGAGCGCCGCCGCGCAGGCGCTGGAGAGCTTCTATTTCAGG
ATCCTGGAGACCAGCTCGTC

Downstream 100 bases:

>100_bases
AGGCTCTCGTCACTGGCGCCAATGGCTTTCTCGGCCGGCACGTGGTGAATGCGCTGCTGGCGCGCGGCATCGAGGTTCGC
GCGATGGTGCGTCCGGCCAC

Product: NADP-dependent dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MKAALIGAGQIARQHLTCLSTLPGVQLAAICDLSPATAEAAAERHAIPSWFTDHREMLRTVQPDVVHVTTPPTSHFRLAM
DALEAGAHVIVEKPATSTFEELQTLTLRAKQTGRYVVEDYNYVFNHAPQEILRKIETGEFGAVTHVDILICLDILGPDGF
ADPNAPHPALKLAGGAIADFLPHLASLSHAFVGPHRTAQTVWSKRKPSPLPFDEFRSVIEAERGTATLGFSASAQPDAFW
LRVYGERMQATANLFETRLTFDGPRNVPKPLRPFFSGLDEGRDIRRAALSTLLRKFKGPGAYEGLWACLSRTYQALAARA
TLPITVEDVLSVNRMVEAMKPREQVA

Sequences:

>Translated_346_residues
MKAALIGAGQIARQHLTCLSTLPGVQLAAICDLSPATAEAAAERHAIPSWFTDHREMLRTVQPDVVHVTTPPTSHFRLAM
DALEAGAHVIVEKPATSTFEELQTLTLRAKQTGRYVVEDYNYVFNHAPQEILRKIETGEFGAVTHVDILICLDILGPDGF
ADPNAPHPALKLAGGAIADFLPHLASLSHAFVGPHRTAQTVWSKRKPSPLPFDEFRSVIEAERGTATLGFSASAQPDAFW
LRVYGERMQATANLFETRLTFDGPRNVPKPLRPFFSGLDEGRDIRRAALSTLLRKFKGPGAYEGLWACLSRTYQALAARA
TLPITVEDVLSVNRMVEAMKPREQVA
>Mature_346_residues
MKAALIGAGQIARQHLTCLSTLPGVQLAAICDLSPATAEAAAERHAIPSWFTDHREMLRTVQPDVVHVTTPPTSHFRLAM
DALEAGAHVIVEKPATSTFEELQTLTLRAKQTGRYVVEDYNYVFNHAPQEILRKIETGEFGAVTHVDILICLDILGPDGF
ADPNAPHPALKLAGGAIADFLPHLASLSHAFVGPHRTAQTVWSKRKPSPLPFDEFRSVIEAERGTATLGFSASAQPDAFW
LRVYGERMQATANLFETRLTFDGPRNVPKPLRPFFSGLDEGRDIRRAALSTLLRKFKGPGAYEGLWACLSRTYQALAARA
TLPITVEDVLSVNRMVEAMKPREQVA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=144, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24581117, Length=192, Percent_Identity=24.4791666666667, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37936; Mature: 37936

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAALIGAGQIARQHLTCLSTLPGVQLAAICDLSPATAEAAAERHAIPSWFTDHREMLRT
CCCEEECHHHHHHHHHHHHHHCCCCCEEHEECCCCHHHHHHHHHCCCCHHHHHHHHHHHH
VQPDVVHVTTPPTSHFRLAMDALEAGAHVIVEKPATSTFEELQTLTLRAKQTGRYVVEDY
CCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEHHH
NYVFNHAPQEILRKIETGEFGAVTHVDILICLDILGPDGFADPNAPHPALKLAGGAIADF
HHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHH
LPHLASLSHAFVGPHRTAQTVWSKRKPSPLPFDEFRSVIEAERGTATLGFSASAQPDAFW
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCHHH
LRVYGERMQATANLFETRLTFDGPRNVPKPLRPFFSGLDEGRDIRRAALSTLLRKFKGPG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
AYEGLWACLSRTYQALAARATLPITVEDVLSVNRMVEAMKPREQVA
CHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure
MKAALIGAGQIARQHLTCLSTLPGVQLAAICDLSPATAEAAAERHAIPSWFTDHREMLRT
CCCEEECHHHHHHHHHHHHHHCCCCCEEHEECCCCHHHHHHHHHCCCCHHHHHHHHHHHH
VQPDVVHVTTPPTSHFRLAMDALEAGAHVIVEKPATSTFEELQTLTLRAKQTGRYVVEDY
CCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEHHH
NYVFNHAPQEILRKIETGEFGAVTHVDILICLDILGPDGFADPNAPHPALKLAGGAIADF
HHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHH
LPHLASLSHAFVGPHRTAQTVWSKRKPSPLPFDEFRSVIEAERGTATLGFSASAQPDAFW
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCHHH
LRVYGERMQATANLFETRLTFDGPRNVPKPLRPFFSGLDEGRDIRRAALSTLLRKFKGPG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
AYEGLWACLSRTYQALAARATLPITVEDVLSVNRMVEAMKPREQVA
CHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]