| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341434
Identifier: 146341434
GI number: 146341434
Start: 4725514
End: 4725981
Strand: Direct
Name: 146341434
Synonym: BRADO4525
Alternate gene names: NA
Gene position: 4725514-4725981 (Clockwise)
Preceding gene: 146341432
Following gene: 146341435
Centisome position: 63.37
GC content: 67.95
Gene sequence:
>468_bases ATGGCGGGTACGGTTGAACAGACTCTGGCGTCACAGGGCATCACGTTGCCGGCGCCGAAGGCTCCGGTGGCCAATTATGT CCCGTTCGTGCGCACCGGCAATCTGCTGTTCGTCTCGGGTCAGGTCTGCCTCGGCGGCGACGGCAAGCTGATCGCGGCGG GCAAGCTCGGCGGCGGCGTGTCGATCGAGGACGGCTATGCCGCGGCGAAGGGCTGCGGCATCAACCTGCTCGCCCAGGTC AAGGCGGCGGTCGGCGATCTCGACAAGGTGGTGCGCGTGGTGCGGCTCGGCGGCTTCGTCAATTCGGCCCCCGACTTCCT GGATGGACCGAAGGTGCTCAACGGCGCCTCGGACCTGATGGTCGCAGCGTTCGGCGACAAGGGCCGCCACGCCCGCACCA CGGTCGGCGTCGCATCGCTGCCGTCGGATGCGGCAGTGGAAGTCGAAGGCGTGTTCGAGGTCGAGTGA
Upstream 100 bases:
>100_bases AACGGCGGCGGCCGCTGCTTGCATGTCGCTGGCAACTGCGCCAAACAGGGCCGCGGTCCGGCACGGGCCCATTATTCACG CGACAGATCGGGGATTTGCG
Downstream 100 bases:
>100_bases GATTGAATTGGACGAGAATGGACGGGGCGAATGCGCGCACCTGACTGGCTGACGGCCCGCCCCGTCGCCCATCGCGGCCT GCATGATGCGGCCAGCGGCA
Product: putative endoribonuclease L-PSP
Products: NA
Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-Psp; Endoribonuclease; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Transcriptional Regulator; Transcription Regulator; Endoribonuclease Family Protein; L-PSP Family Endoribonuclease; YjgF Family Translation Initiation Inhibitor; Endoribonuclease L-PSP Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; Endoribonuclease-L-PSP Family Protein
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MAGTVEQTLASQGITLPAPKAPVANYVPFVRTGNLLFVSGQVCLGGDGKLIAAGKLGGGVSIEDGYAAAKGCGINLLAQV KAAVGDLDKVVRVVRLGGFVNSAPDFLDGPKVLNGASDLMVAAFGDKGRHARTTVGVASLPSDAAVEVEGVFEVE
Sequences:
>Translated_155_residues MAGTVEQTLASQGITLPAPKAPVANYVPFVRTGNLLFVSGQVCLGGDGKLIAAGKLGGGVSIEDGYAAAKGCGINLLAQV KAAVGDLDKVVRVVRLGGFVNSAPDFLDGPKVLNGASDLMVAAFGDKGRHARTTVGVASLPSDAAVEVEGVFEVE >Mature_154_residues AGTVEQTLASQGITLPAPKAPVANYVPFVRTGNLLFVSGQVCLGGDGKLIAAGKLGGGVSIEDGYAAAKGCGINLLAQVK AAVGDLDKVVRVVRLGGFVNSAPDFLDGPKVLNGASDLMVAAFGDKGRHARTTVGVASLPSDAAVEVEGVFEVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15565; Mature: 15434
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGTVEQTLASQGITLPAPKAPVANYVPFVRTGNLLFVSGQVCLGGDGKLIAAGKLGGGV CCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCEEECCCCCEEEECCCCCCC SIEDGYAAAKGCGINLLAQVKAAVGDLDKVVRVVRLGGFVNSAPDFLDGPKVLNGASDLM EECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE VAAFGDKGRHARTTVGVASLPSDAAVEVEGVFEVE EEEECCCCCCCEEEEEEEECCCCCEEEEEEEEECC >Mature Secondary Structure AGTVEQTLASQGITLPAPKAPVANYVPFVRTGNLLFVSGQVCLGGDGKLIAAGKLGGGV CCCHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCEEECCCCCEEEECCCCCCC SIEDGYAAAKGCGINLLAQVKAAVGDLDKVVRVVRLGGFVNSAPDFLDGPKVLNGASDLM EECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE VAAFGDKGRHARTTVGVASLPSDAAVEVEGVFEVE EEEECCCCCCCEEEEEEEECCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA