Click here to switch to the map view.

The map label for this gene is ssuD [H]

Identifier: 146341282

GI number: 146341282

Start: 4549675

End: 4550778

Strand: Reverse

Name: ssuD [H]

Synonym: BRADO4361

Alternate gene names: 146341282

Gene position: 4550778-4549675 (Counterclockwise)

Preceding gene: 146341283

Following gene: 146341281

Centisome position: 61.03

GC content: 67.3

Gene sequence:

>1104_bases
ATGTCCGAAATCGAATTCATCGGCTTCATTTCCAACAACAACTCGTCCGAGATCATCGTCCGCCAGGGACCGGTGCTCGA
TCCCGTTCACATCGAGACGGTGGCGAAGGCGCACGAGAATGCCGGCTTCGACCGCGCGCTCCTGGCATTCCACTCGACCT
CGCCGGACAGCCTGCAGGTCGCCCAGCACGTGCTTGGCGTCACCACCGGGCTGAACGTGCTGATCGCGCAGCGCCCGGGC
TTCACCTCGCCGACCCTGCTGGCGCGTCAGTTCGCGGTGCTCGACCAGTTCTCCAAGGGCCGCGTCGCGCTACATGTCAT
CACCGGTGGCAACGCCAATGAGCTGCGCCAGGACGGCAACACGCTGGACGACAAGAGCGAGCGCTACGCCCGGACCAGCG
AGTTCCTCGACATCGTCCGCGCCGAGTGGACCAGCGAGAAGCCGTTCAGCTACGCAGGCAAGTACTACCAGGTCGAGAAC
GCGTTCGCGCAGGTCAAGCCGTATCGCAAGGAGGGCATCCGGATCTATTTCGGCGGCGCCTCGGATGCCGCTATCGACGT
CGCAGGCAAGCACGCCGACACCTATGCGCTGTGGGGCGAGTCCTATGCGCAGGTGCGTGAGCAGGTCGCCCGCGTCAGCG
CGGCGGCCGCGAAGTGCGGCCGCCCGGCGCCGCGCTTCTCGCTGTCGGTGCGCCCGATCCTCGCCGATACCGAGGAGAAG
GCCTGGGCGAGGGCGCAGGAGATCCTGGAGCGCGCCACCGCGCTGCAGGACCAGACCGGCTACCGCAAGCCTGCCGATGG
CCACGCGACCGACGGCGCCAAGCGCCTGCTCGCGATCGCCGAGCAGGGCAAGCGGGTCGACAAGCGTCTGTGGACCGAGA
TCGCCAAGCTCACCGGCGCCAACAGCAACACCACGGCGCTGGTCGGGACGCCGGAGCAGGTCGCGGAGGTGTTCGGCGAC
TACTACGATCTCGGCATCAGCCATTTCCTGATCCGCGGCTTCGACCCGCTGATCGATGCCATCGATTATGGCCGCGCGCT
GATCCCGGCGACACGCGCGCTGATCGCGCGTCGGCAGGCCGCGAAGGGAGTGGCGGCGGAATGA

Upstream 100 bases:

>100_bases
CGTGCTGTGCGGCCGCGTTCACACCCCGCAGGACGACGCCACGCGCATCGCCGCCGGCCGTCTGGCGCTGGGACTCTAGA
AATACAAGGAGATAGGACCC

Downstream 100 bases:

>100_bases
CGCGCGTTCTCCTTGCCGCGAGCCTGCTACTCGCGTTGACAGTCTCCGCCGTCGCGCAAGTCACCTTGCGTGTCGGTGAC
CAGAAGGGCAATGCGCGCGC

Product: putative sulfonate monooxygenase (SsuD/MsuD-like)

Products: NA

Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase [H]

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MSEIEFIGFISNNNSSEIIVRQGPVLDPVHIETVAKAHENAGFDRALLAFHSTSPDSLQVAQHVLGVTTGLNVLIAQRPG
FTSPTLLARQFAVLDQFSKGRVALHVITGGNANELRQDGNTLDDKSERYARTSEFLDIVRAEWTSEKPFSYAGKYYQVEN
AFAQVKPYRKEGIRIYFGGASDAAIDVAGKHADTYALWGESYAQVREQVARVSAAAAKCGRPAPRFSLSVRPILADTEEK
AWARAQEILERATALQDQTGYRKPADGHATDGAKRLLAIAEQGKRVDKRLWTEIAKLTGANSNTTALVGTPEQVAEVFGD
YYDLGISHFLIRGFDPLIDAIDYGRALIPATRALIARRQAAKGVAAE

Sequences:

>Translated_367_residues
MSEIEFIGFISNNNSSEIIVRQGPVLDPVHIETVAKAHENAGFDRALLAFHSTSPDSLQVAQHVLGVTTGLNVLIAQRPG
FTSPTLLARQFAVLDQFSKGRVALHVITGGNANELRQDGNTLDDKSERYARTSEFLDIVRAEWTSEKPFSYAGKYYQVEN
AFAQVKPYRKEGIRIYFGGASDAAIDVAGKHADTYALWGESYAQVREQVARVSAAAAKCGRPAPRFSLSVRPILADTEEK
AWARAQEILERATALQDQTGYRKPADGHATDGAKRLLAIAEQGKRVDKRLWTEIAKLTGANSNTTALVGTPEQVAEVFGD
YYDLGISHFLIRGFDPLIDAIDYGRALIPATRALIARRQAAKGVAAE
>Mature_366_residues
SEIEFIGFISNNNSSEIIVRQGPVLDPVHIETVAKAHENAGFDRALLAFHSTSPDSLQVAQHVLGVTTGLNVLIAQRPGF
TSPTLLARQFAVLDQFSKGRVALHVITGGNANELRQDGNTLDDKSERYARTSEFLDIVRAEWTSEKPFSYAGKYYQVENA
FAQVKPYRKEGIRIYFGGASDAAIDVAGKHADTYALWGESYAQVREQVARVSAAAAKCGRPAPRFSLSVRPILADTEEKA
WARAQEILERATALQDQTGYRKPADGHATDGAKRLLAIAEQGKRVDKRLWTEIAKLTGANSNTTALVGTPEQVAEVFGDY
YDLGISHFLIRGFDPLIDAIDYGRALIPATRALIARRQAAKGVAAE

Specific function: Catalyzes the desulfonation of aliphatic sulfonates [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SsuD family [H]

Homologues:

Organism=Escherichia coli, GI1787166, Length=330, Percent_Identity=33.030303030303, Blast_Score=149, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019911
- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: =1.14.14.5 [H]

Molecular weight: Translated: 40087; Mature: 39956

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIEFIGFISNNNSSEIIVRQGPVLDPVHIETVAKAHENAGFDRALLAFHSTSPDSLQV
CCCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHH
AQHVLGVTTGLNVLIAQRPGFTSPTLLARQFAVLDQFSKGRVALHVITGGNANELRQDGN
HHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCC
TLDDKSERYARTSEFLDIVRAEWTSEKPFSYAGKYYQVENAFAQVKPYRKEGIRIYFGGA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEHHHHHHHCCCHHHCCEEEEECCC
SDAAIDVAGKHADTYALWGESYAQVREQVARVSAAAAKCGRPAPRFSLSVRPILADTEEK
CCCEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHH
AWARAQEILERATALQDQTGYRKPADGHATDGAKRLLAIAEQGKRVDKRLWTEIAKLTGA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC
NSNTTALVGTPEQVAEVFGDYYDLGISHFLIRGFDPLIDAIDYGRALIPATRALIARRQA
CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHH
AKGVAAE
HCCCCCC
>Mature Secondary Structure 
SEIEFIGFISNNNSSEIIVRQGPVLDPVHIETVAKAHENAGFDRALLAFHSTSPDSLQV
CCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHH
AQHVLGVTTGLNVLIAQRPGFTSPTLLARQFAVLDQFSKGRVALHVITGGNANELRQDGN
HHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCC
TLDDKSERYARTSEFLDIVRAEWTSEKPFSYAGKYYQVENAFAQVKPYRKEGIRIYFGGA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEHHHHHHHCCCHHHCCEEEEECCC
SDAAIDVAGKHADTYALWGESYAQVREQVARVSAAAAKCGRPAPRFSLSVRPILADTEEK
CCCEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHH
AWARAQEILERATALQDQTGYRKPADGHATDGAKRLLAIAEQGKRVDKRLWTEIAKLTGA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC
NSNTTALVGTPEQVAEVFGDYYDLGISHFLIRGFDPLIDAIDYGRALIPATRALIARRQA
CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHH
AKGVAAE
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA