Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is yufQ [H]

Identifier: 146341173

GI number: 146341173

Start: 4448598

End: 4449524

Strand: Direct

Name: yufQ [H]

Synonym: BRADO4246

Alternate gene names: 146341173

Gene position: 4448598-4449524 (Clockwise)

Preceding gene: 146341172

Following gene: 146341174

Centisome position: 59.66

GC content: 68.5

Gene sequence:

>927_bases
ATGGCTGACGGCAACATCGGACTCTGGACCGTGCCGCTCGCGGTGCTCGGCGGCGCCATCCGCGTCTCCACGCCGTTCCT
GTTTGTGAGCCTCGGCGAATGCATCACCGAGCGCTCCGGCCGCATCAATCTCGGCCTCGAGGGCACGCTGGTGATGGGCG
CGATGAGCGCCTACGGCATCTCCTATCTCTCGGGCTCGCCATGGTTAGGGGTGCTCGCCGCCGGCCTGACCGGCGCGCTG
CTGGGGGCGCTGCATGCCGGCATCTGCTCGCTGCCGCGGGTCAACGACGTCGCGGTCGGAATCTCTCTCATGCTGTTCGG
CACCGGGCTGGCGTTCTTCCTCGGCAAGCCGCTGATCGAGCCGACCGCGGCGCGGCTGCCGGCGATCGATTTCGGCTGGT
GGAGTGACGTGCCGCAGGTCCGCGCCGCGCTGCGCATCAATGTGCTGTTCCTGTTCGGCGTGATCATGGCGCCGGTGCTG
TTCTGGGCGTTCAGGACAACGCGCTGGGGCCTGTTGATCCGCACCGCCGGCGAGAGCGCCGACGCGGCGCGCGCGATGGG
CCATTCGGTGCTGATGATCCGCCTGCGCGCGACCATGGCCGGCGGCTTCCTCGCCGGCATCGGCGGCTCGTTCCTGTCGC
TGTTCTATCCCGGCAGCTGGAACGAGGGCCTGTCATCAGGACAAGGCATCACCGCCGTCGCGCTGGTCATCTTCGCGCGC
TGGGACCCGATGCTCTGCCTGTGGGCTTCGCTCGCCTTCGGCGGCGCCGCCGCGCTCGGACCCGCACTGCAATCGGTCGG
CGTCACCTCGGGCTATCATCTGTTCAACGCCGCGCCCTACATCCTGACGCTTCTCATCATGATCATCACCTGCTCGCCGA
AACGCACTCTCAGCGGCGCGCCGGCCGAGCTGTCGATCACGCGGTGA

Upstream 100 bases:

>100_bases
TGCCTCGGTGCTGGTGCTGCAGGGTATCATCTTCATCTCGGTGCTGGCGAGCGACGCGCTCTACGGGCGCATCGGCTTCC
TCAAGGGAAAGTCGTAGGAC

Downstream 100 bases:

>100_bases
TGTGAGTGCGCACGCTGAAGATGTTGGAGCAGGCGATCTTGCTGCGGCCATCCTTCGAGACGGCCGCCTGCGGCGGCCTC
CTCAGGACGAGGACTGTTTC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MADGNIGLWTVPLAVLGGAIRVSTPFLFVSLGECITERSGRINLGLEGTLVMGAMSAYGISYLSGSPWLGVLAAGLTGAL
LGALHAGICSLPRVNDVAVGISLMLFGTGLAFFLGKPLIEPTAARLPAIDFGWWSDVPQVRAALRINVLFLFGVIMAPVL
FWAFRTTRWGLLIRTAGESADAARAMGHSVLMIRLRATMAGGFLAGIGGSFLSLFYPGSWNEGLSSGQGITAVALVIFAR
WDPMLCLWASLAFGGAAALGPALQSVGVTSGYHLFNAAPYILTLLIMIITCSPKRTLSGAPAELSITR

Sequences:

>Translated_308_residues
MADGNIGLWTVPLAVLGGAIRVSTPFLFVSLGECITERSGRINLGLEGTLVMGAMSAYGISYLSGSPWLGVLAAGLTGAL
LGALHAGICSLPRVNDVAVGISLMLFGTGLAFFLGKPLIEPTAARLPAIDFGWWSDVPQVRAALRINVLFLFGVIMAPVL
FWAFRTTRWGLLIRTAGESADAARAMGHSVLMIRLRATMAGGFLAGIGGSFLSLFYPGSWNEGLSSGQGITAVALVIFAR
WDPMLCLWASLAFGGAAALGPALQSVGVTSGYHLFNAAPYILTLLIMIITCSPKRTLSGAPAELSITR
>Mature_307_residues
ADGNIGLWTVPLAVLGGAIRVSTPFLFVSLGECITERSGRINLGLEGTLVMGAMSAYGISYLSGSPWLGVLAAGLTGALL
GALHAGICSLPRVNDVAVGISLMLFGTGLAFFLGKPLIEPTAARLPAIDFGWWSDVPQVRAALRINVLFLFGVIMAPVLF
WAFRTTRWGLLIRTAGESADAARAMGHSVLMIRLRATMAGGFLAGIGGSFLSLFYPGSWNEGLSSGQGITAVALVIFARW
DPMLCLWASLAFGGAAALGPALQSVGVTSGYHLFNAAPYILTLLIMIITCSPKRTLSGAPAELSITR

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32188; Mature: 32057

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGNIGLWTVPLAVLGGAIRVSTPFLFVSLGECITERSGRINLGLEGTLVMGAMSAYGI
CCCCCCCHHHHHHHHHCCCCEECCCCCEEEHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
SYLSGSPWLGVLAAGLTGALLGALHAGICSLPRVNDVAVGISLMLFGTGLAFFLGKPLIE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PTAARLPAIDFGWWSDVPQVRAALRINVLFLFGVIMAPVLFWAFRTTRWGLLIRTAGESA
CHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH
DAARAMGHSVLMIRLRATMAGGFLAGIGGSFLSLFYPGSWNEGLSSGQGITAVALVIFAR
HHHHHHCCCEEEEEEHHHHCCCHHHHCCHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHC
WDPMLCLWASLAFGGAAALGPALQSVGVTSGYHLFNAAPYILTLLIMIITCSPKRTLSGA
CCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCC
PAELSITR
CCEEEECC
>Mature Secondary Structure 
ADGNIGLWTVPLAVLGGAIRVSTPFLFVSLGECITERSGRINLGLEGTLVMGAMSAYGI
CCCCCCHHHHHHHHHCCCCEECCCCCEEEHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
SYLSGSPWLGVLAAGLTGALLGALHAGICSLPRVNDVAVGISLMLFGTGLAFFLGKPLIE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PTAARLPAIDFGWWSDVPQVRAALRINVLFLFGVIMAPVLFWAFRTTRWGLLIRTAGESA
CHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH
DAARAMGHSVLMIRLRATMAGGFLAGIGGSFLSLFYPGSWNEGLSSGQGITAVALVIFAR
HHHHHHCCCEEEEEEHHHHCCCHHHHCCHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHC
WDPMLCLWASLAFGGAAALGPALQSVGVTSGYHLFNAAPYILTLLIMIITCSPKRTLSGA
CCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCC
PAELSITR
CCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]