Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146341166
Identifier: 146341166
GI number: 146341166
Start: 4441541
End: 4442467
Strand: Direct
Name: 146341166
Synonym: BRADO4238
Alternate gene names: NA
Gene position: 4441541-4442467 (Clockwise)
Preceding gene: 146341165
Following gene: 146341167
Centisome position: 59.57
GC content: 65.8
Gene sequence:
>927_bases ATGAGCGAACGCGAGACTACCGACGAGCGCGCGCTGCGCGAGCTGATCGACGAGGATTTCCGCGACAGCATGGACGAGGA GCTGGAGCTCGAGCTCGGCGACGACCAGTTCGACGAGTTTCGCCGGCTCGAGCTCGGCCATCAGGCGCATCCGAGCATGG ACCGCCGGGTGTATTTCAAGGAGCTGTTCCGGCTGCAGGGCGAGCTGGTGAAGCTGCAGGACTGGGTTCAGCACAACAAG CTCAAGGTCGTGGTGCTGTTCGAGGGCCGCGATTCCGCCGGCAAGGGCGGCGCCATCAAGCGCATCACCCAGCGGCTCAA CCCGCGCGTCTGCCGCGTGGCGGCGCTGCCGGCGCCGAACGAGCGCGAGCGCACGCAATGGTATTTCCAGCGCTATGCGA CGCATCTGCCGGCCGGCGGCGAGATCGTGCTGTTCGACCGCTCCTGGTACAACCGCGCCGGTGTCGAGCGCGTGATGGGC TTCTGCACCGAGGACCAGGTCGAGGAGTTCTTCCGCTCGGTGCCGGAGTTCGAGCGCATGCTGGTGCGATCCGGCATCAT CCTGATCAAGTACTGGTTCTCGATCACCGACGAGGAGCAGCAGTTCCGCTTCCTGATGCGCATCCACGATCCGCTCAAGC AGTGGAAGCTGAGCCCGATGGACGTGCAGGCGCGCAGCCGCTGGGAGCAGTACACCAAGGCCAAGGAGGAGATGCTGCAC CGGACGCACATCCCGGAGGCGCCGTGGTGGGTGGTGGAGGCCGTCGACAAGAAGCGCGCGCGGCTGAACTGCATCTCGCA TCTCCTCAGCCAGATCCCCTATGGCGAGGTGCAACACGAGCCGGTCGTCCTGCCCGAGCGCGTCCGCAGCCCGGACTATC GCCGCGAGCAGATCCCACCGGAGCTGTACGTGCCGTCGCTGTATTGA
Upstream 100 bases:
>100_bases CCGGTCCGGCCGCGGAAATCGCGTCGCAGTCGCATGTCACACCCCTGTCAATGGCCGTGAGGCAATTTGCACGGCCACAT CGAGCATGGGGACGATACCG
Downstream 100 bases:
>100_bases GGCGAACGACGCACGCTTTCTCCTCCGTGATTGCGAGCGAAGTGACGCAATCGAGAGTCCCGCTCACCACACTGGATTGC GTCGCTACGCTCGCAATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSERETTDERALRELIDEDFRDSMDEELELELGDDQFDEFRRLELGHQAHPSMDRRVYFKELFRLQGELVKLQDWVQHNK LKVVVLFEGRDSAGKGGAIKRITQRLNPRVCRVAALPAPNERERTQWYFQRYATHLPAGGEIVLFDRSWYNRAGVERVMG FCTEDQVEEFFRSVPEFERMLVRSGIILIKYWFSITDEEQQFRFLMRIHDPLKQWKLSPMDVQARSRWEQYTKAKEEMLH RTHIPEAPWWVVEAVDKKRARLNCISHLLSQIPYGEVQHEPVVLPERVRSPDYRREQIPPELYVPSLY
Sequences:
>Translated_308_residues MSERETTDERALRELIDEDFRDSMDEELELELGDDQFDEFRRLELGHQAHPSMDRRVYFKELFRLQGELVKLQDWVQHNK LKVVVLFEGRDSAGKGGAIKRITQRLNPRVCRVAALPAPNERERTQWYFQRYATHLPAGGEIVLFDRSWYNRAGVERVMG FCTEDQVEEFFRSVPEFERMLVRSGIILIKYWFSITDEEQQFRFLMRIHDPLKQWKLSPMDVQARSRWEQYTKAKEEMLH RTHIPEAPWWVVEAVDKKRARLNCISHLLSQIPYGEVQHEPVVLPERVRSPDYRREQIPPELYVPSLY >Mature_307_residues SERETTDERALRELIDEDFRDSMDEELELELGDDQFDEFRRLELGHQAHPSMDRRVYFKELFRLQGELVKLQDWVQHNKL KVVVLFEGRDSAGKGGAIKRITQRLNPRVCRVAALPAPNERERTQWYFQRYATHLPAGGEIVLFDRSWYNRAGVERVMGF CTEDQVEEFFRSVPEFERMLVRSGIILIKYWFSITDEEQQFRFLMRIHDPLKQWKLSPMDVQARSRWEQYTKAKEEMLHR THIPEAPWWVVEAVDKKRARLNCISHLLSQIPYGEVQHEPVVLPERVRSPDYRREQIPPELYVPSLY
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 36877; Mature: 36746
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERETTDERALRELIDEDFRDSMDEELELELGDDQFDEFRRLELGHQAHPSMDRRVYFK CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHH ELFRLQGELVKLQDWVQHNKLKVVVLFEGRDSAGKGGAIKRITQRLNPRVCRVAALPAPN HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCC ERERTQWYFQRYATHLPAGGEIVLFDRSWYNRAGVERVMGFCTEDQVEEFFRSVPEFERM CHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHH LVRSGIILIKYWFSITDEEQQFRFLMRIHDPLKQWKLSPMDVQARSRWEQYTKAKEEMLH HHHCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH RTHIPEAPWWVVEAVDKKRARLNCISHLLSQIPYGEVQHEPVVLPERVRSPDYRREQIPP HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHCCCC ELYVPSLY CCCCCCCC >Mature Secondary Structure SERETTDERALRELIDEDFRDSMDEELELELGDDQFDEFRRLELGHQAHPSMDRRVYFK CCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHH ELFRLQGELVKLQDWVQHNKLKVVVLFEGRDSAGKGGAIKRITQRLNPRVCRVAALPAPN HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCC ERERTQWYFQRYATHLPAGGEIVLFDRSWYNRAGVERVMGFCTEDQVEEFFRSVPEFERM CHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHH LVRSGIILIKYWFSITDEEQQFRFLMRIHDPLKQWKLSPMDVQARSRWEQYTKAKEEMLH HHHCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH RTHIPEAPWWVVEAVDKKRARLNCISHLLSQIPYGEVQHEPVVLPERVRSPDYRREQIPP HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHCCCC ELYVPSLY CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]