Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146341165
Identifier: 146341165
GI number: 146341165
Start: 4440491
End: 4441432
Strand: Direct
Name: 146341165
Synonym: BRADO4237
Alternate gene names: NA
Gene position: 4440491-4441432 (Clockwise)
Preceding gene: 146341163
Following gene: 146341166
Centisome position: 59.55
GC content: 65.82
Gene sequence:
>942_bases ATGGCCCATCATCACCTGCACGCCAGCCCCGAAACCTGTCACTGGGGCTTTTTCGAATCCCGCCTGAAGCCGGTTCTGAC GATCGACAGCGGCGACGAGGTCACGATCGATTCGATCAGCGGCGGACCCGACGTGTTGCCGGATGCGAGCAAGTTCTACA TTCCGCCGGAATTGCTGGAGGTCCACGCCAAATCCGAGCGCATGGTGCCCGGCCACATCCTGACGGGGCCCATCGCCGTG AAGGGTGCAGAGGTCGGCGACGTGCTGGAGGTCGACATCCTCGACGTCCAGCTGCGCCAGGACTGGGGCTACAATTTCAT CCGCCCGCTGGCCGGCACACTGCCCGACGATTTCCACCAAACCCGGCTGATGAACATTCCGCTCGATCGCGAGCGCATGG TCGGCCGGATGCCGTGGGGGCTGGAGCTGCCGCTGGCGCCATTCTTCGGCGTCATGGGCACGGCGCCGCCGTCGGCCTGG GGCCGCATCACTTCGCTGATCCCGCGCGCGATGGGCGGCAATCTCGACAACAAGGAGCTGGGTGCCGGCGCGAAGCTGTA TCTCCCGGTGTTCGTGCCGGGGGCGCTGTTCTCCTGCGGCGACGGCCACGGCGTGCAGGGCGACGGCGAGGTCTGCGTCA CCGCGATCGAGACCGCGCTGCAGGGCCGCTTCCGCCTCACCGTGCGCAAGGACCTCAGTTTCGACTACCCCCGCGCCGAG ACGCCGACGCATTACATGACGATGGCGATGGACCCCGATCTCGACCAGTGCGTGGTCAAGGCGCTGCGCGACATGATCGT GCTGCTCGGCGAGAAGCGTAATCTGTCGCGTGAGGATGCATATACGCTGTGCAGCCTGGCGGCGGATCTGCGCGTGACGC AGACGGTCAACGGCTCCAAGGGCATTCACTGCGTGATCGCGAAATCGGTCGTGCACGGCTGA
Upstream 100 bases:
>100_bases GGCCGCCCTCATACACGAGAGCCGGCATGCGTTGCCATCTCTCTGCGAACGCCGTGTGATGCGCTATGCTCAGGCCCGAA CCGGCACGAATGAGAGGATC
Downstream 100 bases:
>100_bases GGCCCTTGCCGGTCCGGCCGCGGAAATCGCGTCGCAGTCGCATGTCACACCCCTGTCAATGGCCGTGAGGCAATTTGCAC GGCCACATCGAGCATGGGGA
Product: putative acetamidase/formamidase family protein
Products: NA
Alternate protein names: Formamidase; Acetamidase/Formamidase Family Protein; Acetamidase; Amidase; Acetamidase/Formamidase Family; Transcriptional Regulator; AraC Family Transcriptional Regulator; Acetamidase/Formamidase Protein; Amidase-Related Protein; Amidae; Twin-Arginine Translocation Pathway Signal; Formamidase/Acetamidase; Transcriptional Regulatory Protein; Transcription Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MAHHHLHASPETCHWGFFESRLKPVLTIDSGDEVTIDSISGGPDVLPDASKFYIPPELLEVHAKSERMVPGHILTGPIAV KGAEVGDVLEVDILDVQLRQDWGYNFIRPLAGTLPDDFHQTRLMNIPLDRERMVGRMPWGLELPLAPFFGVMGTAPPSAW GRITSLIPRAMGGNLDNKELGAGAKLYLPVFVPGALFSCGDGHGVQGDGEVCVTAIETALQGRFRLTVRKDLSFDYPRAE TPTHYMTMAMDPDLDQCVVKALRDMIVLLGEKRNLSREDAYTLCSLAADLRVTQTVNGSKGIHCVIAKSVVHG
Sequences:
>Translated_313_residues MAHHHLHASPETCHWGFFESRLKPVLTIDSGDEVTIDSISGGPDVLPDASKFYIPPELLEVHAKSERMVPGHILTGPIAV KGAEVGDVLEVDILDVQLRQDWGYNFIRPLAGTLPDDFHQTRLMNIPLDRERMVGRMPWGLELPLAPFFGVMGTAPPSAW GRITSLIPRAMGGNLDNKELGAGAKLYLPVFVPGALFSCGDGHGVQGDGEVCVTAIETALQGRFRLTVRKDLSFDYPRAE TPTHYMTMAMDPDLDQCVVKALRDMIVLLGEKRNLSREDAYTLCSLAADLRVTQTVNGSKGIHCVIAKSVVHG >Mature_312_residues AHHHLHASPETCHWGFFESRLKPVLTIDSGDEVTIDSISGGPDVLPDASKFYIPPELLEVHAKSERMVPGHILTGPIAVK GAEVGDVLEVDILDVQLRQDWGYNFIRPLAGTLPDDFHQTRLMNIPLDRERMVGRMPWGLELPLAPFFGVMGTAPPSAWG RITSLIPRAMGGNLDNKELGAGAKLYLPVFVPGALFSCGDGHGVQGDGEVCVTAIETALQGRFRLTVRKDLSFDYPRAET PTHYMTMAMDPDLDQCVVKALRDMIVLLGEKRNLSREDAYTLCSLAADLRVTQTVNGSKGIHCVIAKSVVHG
Specific function: Unknown
COG id: COG2421
COG function: function code C; Predicted acetamidase/formamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34215; Mature: 34084
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHHHLHASPETCHWGFFESRLKPVLTIDSGDEVTIDSISGGPDVLPDASKFYIPPELLE CCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHH VHAKSERMVPGHILTGPIAVKGAEVGDVLEVDILDVQLRQDWGYNFIRPLAGTLPDDFHQ HHCCCCCCCCCEEEECCEEEECCCCCCEEEEEEEEEEEECCCCCHHHHHHHCCCCCCHHH TRLMNIPLDRERMVGRMPWGLELPLAPFFGVMGTAPPSAWGRITSLIPRAMGGNLDNKEL HEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHH GAGAKLYLPVFVPGALFSCGDGHGVQGDGEVCVTAIETALQGRFRLTVRKDLSFDYPRAE CCCCEEEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCC TPTHYMTMAMDPDLDQCVVKALRDMIVLLGEKRNLSREDAYTLCSLAADLRVTQTVNGSK CCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEECCCCC GIHCVIAKSVVHG CEEEEEEHHHHCC >Mature Secondary Structure AHHHLHASPETCHWGFFESRLKPVLTIDSGDEVTIDSISGGPDVLPDASKFYIPPELLE CCCCCCCCCCCCCCCHHHHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHH VHAKSERMVPGHILTGPIAVKGAEVGDVLEVDILDVQLRQDWGYNFIRPLAGTLPDDFHQ HHCCCCCCCCCEEEECCEEEECCCCCCEEEEEEEEEEEECCCCCHHHHHHHCCCCCCHHH TRLMNIPLDRERMVGRMPWGLELPLAPFFGVMGTAPPSAWGRITSLIPRAMGGNLDNKEL HEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHH GAGAKLYLPVFVPGALFSCGDGHGVQGDGEVCVTAIETALQGRFRLTVRKDLSFDYPRAE CCCCEEEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCC TPTHYMTMAMDPDLDQCVVKALRDMIVLLGEKRNLSREDAYTLCSLAADLRVTQTVNGSK CCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEECCCCC GIHCVIAKSVVHG CEEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA