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The map label for this gene is ycbC [H]

Identifier: 146341164

GI number: 146341164

Start: 4439572

End: 4440360

Strand: Reverse

Name: ycbC [H]

Synonym: BRADO4236

Alternate gene names: 146341164

Gene position: 4440360-4439572 (Counterclockwise)

Preceding gene: 146341169

Following gene: 146341162

Centisome position: 59.55

GC content: 66.67

Gene sequence:

>789_bases
ATGTTCTTCGTCCTGTCCAAGACGCTCGGCCTCCTGGCACTGCCGACCAATTTCATGATTGCGCTCGGTCTCCTCGGCGC
CATCCTGATGCTGACGCGGTTTGCCGTGCTGGGTCGCAGGCTCGTGGCGTCGGCGATGCTGCTGCTCGCGATCGTCGGCC
TGACGCCGCTTGGCAGTCTGATGCTCTACCCGCTGGAGAGCCGGTTTCCGAAATGGGATCCGGCCAAGGGGGCGCCGGAC
GGCATCATCGTGCTCGGCGGTCCGGTCGATTCCGATCTGTCGGCGATATACGGCATGCCGGTGACGGTGGCCGGCGCAGA
CCGGGTGATCCAGGCGGCGGTGCTGGCGCGGCGCTATCCGAATGCCCGCGTCCTGTTCACGGGCGGAAGCGCCAACCTGA
TCGCGACGGACGCCAAGGAGGCCGATGTCGGCGCCGAGATCCTGGAAAGCCTGGGGGTCGCCAAGCAGCGGCTGCTGCTC
GAGCGGCAGTCGCGCAACACCTACGAGAACGCGATCTTCTCGAAAGCGATGATCGCGCCCAAGCCGGGCGAGCGCTGGCT
GCTGGTGACCTCGGCCTATCACATGCCGCGCTCGGTCGGACTGTTCCGGAAGGCGGGATTCCCGGTCGAGCCTTATCCGG
TGGACTGGCGGGTCGGCCGCGTGCTCGACTTCGACGGCGTCTCGCTCCAAGGCCTTCGTCGTGCCGACATCGCCGTGCGC
GAATGGGTCGGGCTCGTGGCCTACCGTCTTCGCGGACGCACCGACGACTTATTTCCCGGTCCGACTTAA

Upstream 100 bases:

>100_bases
AGCATAGCGCATCACACGGCGTTCGCAGAGAGATGGCAACGCATGCCGGCTCTCGTGTATGAGGGCGGCCGTAAGATCTC
ACCCCGCGCCGGAGCCCGGA

Downstream 100 bases:

>100_bases
ACGCGCGGCTGAATGAGAGTCGCCGCCTTCGCCGCCAGCTCGCCCCGCACGCGCGCGACGACCGGCTCAAAGCGGCGGCC
GGCATCCTGCCGGAACAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MFFVLSKTLGLLALPTNFMIALGLLGAILMLTRFAVLGRRLVASAMLLLAIVGLTPLGSLMLYPLESRFPKWDPAKGAPD
GIIVLGGPVDSDLSAIYGMPVTVAGADRVIQAAVLARRYPNARVLFTGGSANLIATDAKEADVGAEILESLGVAKQRLLL
ERQSRNTYENAIFSKAMIAPKPGERWLLVTSAYHMPRSVGLFRKAGFPVEPYPVDWRVGRVLDFDGVSLQGLRRADIAVR
EWVGLVAYRLRGRTDDLFPGPT

Sequences:

>Translated_262_residues
MFFVLSKTLGLLALPTNFMIALGLLGAILMLTRFAVLGRRLVASAMLLLAIVGLTPLGSLMLYPLESRFPKWDPAKGAPD
GIIVLGGPVDSDLSAIYGMPVTVAGADRVIQAAVLARRYPNARVLFTGGSANLIATDAKEADVGAEILESLGVAKQRLLL
ERQSRNTYENAIFSKAMIAPKPGERWLLVTSAYHMPRSVGLFRKAGFPVEPYPVDWRVGRVLDFDGVSLQGLRRADIAVR
EWVGLVAYRLRGRTDDLFPGPT
>Mature_262_residues
MFFVLSKTLGLLALPTNFMIALGLLGAILMLTRFAVLGRRLVASAMLLLAIVGLTPLGSLMLYPLESRFPKWDPAKGAPD
GIIVLGGPVDSDLSAIYGMPVTVAGADRVIQAAVLARRYPNARVLFTGGSANLIATDAKEADVGAEILESLGVAKQRLLL
ERQSRNTYENAIFSKAMIAPKPGERWLLVTSAYHMPRSVGLFRKAGFPVEPYPVDWRVGRVLDFDGVSLQGLRRADIAVR
EWVGLVAYRLRGRTDDLFPGPT

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=218, Percent_Identity=31.1926605504587, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 28419; Mature: 28419

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFVLSKTLGLLALPTNFMIALGLLGAILMLTRFAVLGRRLVASAMLLLAIVGLTPLGSL
CEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
MLYPLESRFPKWDPAKGAPDGIIVLGGPVDSDLSAIYGMPVTVAGADRVIQAAVLARRYP
HEEEHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCEEECCHHHHHHHHHHHHHCC
NARVLFTGGSANLIATDAKEADVGAEILESLGVAKQRLLLERQSRNTYENAIFSKAMIAP
CCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
KPGERWLLVTSAYHMPRSVGLFRKAGFPVEPYPVDWRVGRVLDFDGVSLQGLRRADIAVR
CCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEECEEEECCCCCCCCCHHHHHHHH
EWVGLVAYRLRGRTDDLFPGPT
HHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MFFVLSKTLGLLALPTNFMIALGLLGAILMLTRFAVLGRRLVASAMLLLAIVGLTPLGSL
CEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
MLYPLESRFPKWDPAKGAPDGIIVLGGPVDSDLSAIYGMPVTVAGADRVIQAAVLARRYP
HEEEHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCEEECCHHHHHHHHHHHHHCC
NARVLFTGGSANLIATDAKEADVGAEILESLGVAKQRLLLERQSRNTYENAIFSKAMIAP
CCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
KPGERWLLVTSAYHMPRSVGLFRKAGFPVEPYPVDWRVGRVLDFDGVSLQGLRRADIAVR
CCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEECEEEECCCCCCCCCHHHHHHHH
EWVGLVAYRLRGRTDDLFPGPT
HHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]