Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146341089
Identifier: 146341089
GI number: 146341089
Start: 4360899
End: 4361405
Strand: Reverse
Name: 146341089
Synonym: BRADO4160
Alternate gene names: NA
Gene position: 4361405-4360899 (Counterclockwise)
Preceding gene: 146341090
Following gene: 146341088
Centisome position: 58.49
GC content: 66.86
Gene sequence:
>507_bases ATGACGCTGTTCAAGCGCTCACTGCTCGCTCTCGCTTTTCTGCTGGCCGGCTCTGCCGCGGCATTCGCTGCCGACATCAA GGCCGGTGACCTCGTCATCTCCCAGCCGTGGAGCCGCGCCACGCCTGGCAGCGCCAAGACCGGGGCAGGCTATCTCACCA TCCAGAACACCGGCAGCGCGCCGGACCGGCTCGTCGCCGTGGCCGGAGACATCGCGGGCCGCATCGAGGTGCACGAGATG GCCGTCAACAACGGCGTCATGACGATGCGTCCGCTGGAGAAGGGACTCGAGATCGAGCCGGGCAAGACCGTCGCGTTGGC GCCCGGCGGCTATCATCTGATGCTGATGGAGCTGAAGAGCCCGCTGAAGCAGGGCGACAAGCTGCCGCTCACGCTGGAAT TCGAGAAGGCCGGCAAGGTTGCCGTGACGCTCGACGTCCAGGCCGTCGGCGCCAAGGGGCCGGGCGGCGAGGGCGGCGGC ATGATGAAGCACGATCACAAGATGTAG
Upstream 100 bases:
>100_bases CGTAACACTGCATCCGCTCCGTTTTCGGCCGACGTCGCATCGGCTGAGCCGCGCTGGCCTCACGCCAGTGCGGCACGATC AACATCGAAAGGAATCACCC
Downstream 100 bases:
>100_bases GGCAGAGGCACGCGAATGGACCGACGTGTCTTCAACAGCTCGGTTCTGGCAGGCTCGCTCGCGGGCCTGCTGCTGCCGGG CGCGCAGGCCGAGCAGGCGC
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTLFKRSLLALAFLLAGSAAAFAADIKAGDLVISQPWSRATPGSAKTGAGYLTIQNTGSAPDRLVAVAGDIAGRIEVHEM AVNNGVMTMRPLEKGLEIEPGKTVALAPGGYHLMLMELKSPLKQGDKLPLTLEFEKAGKVAVTLDVQAVGAKGPGGEGGG MMKHDHKM
Sequences:
>Translated_168_residues MTLFKRSLLALAFLLAGSAAAFAADIKAGDLVISQPWSRATPGSAKTGAGYLTIQNTGSAPDRLVAVAGDIAGRIEVHEM AVNNGVMTMRPLEKGLEIEPGKTVALAPGGYHLMLMELKSPLKQGDKLPLTLEFEKAGKVAVTLDVQAVGAKGPGGEGGG MMKHDHKM >Mature_167_residues TLFKRSLLALAFLLAGSAAAFAADIKAGDLVISQPWSRATPGSAKTGAGYLTIQNTGSAPDRLVAVAGDIAGRIEVHEMA VNNGVMTMRPLEKGLEIEPGKTVALAPGGYHLMLMELKSPLKQGDKLPLTLEFEKAGKVAVTLDVQAVGAKGPGGEGGGM MKHDHKM
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007410 [H]
Pfam domain/function: PF04314 DUF461 [H]
EC number: NA
Molecular weight: Translated: 17435; Mature: 17303
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFKRSLLALAFLLAGSAAAFAADIKAGDLVISQPWSRATPGSAKTGAGYLTIQNTGSA CCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCC PDRLVAVAGDIAGRIEVHEMAVNNGVMTMRPLEKGLEIEPGKTVALAPGGYHLMLMELKS CCEEEEEECCCCCEEEEEEEEECCCEEEEEHHCCCCEECCCCEEEECCCCEEEEEEHHHH PLKQGDKLPLTLEFEKAGKVAVTLDVQAVGAKGPGGEGGGMMKHDHKM HHHCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLFKRSLLALAFLLAGSAAAFAADIKAGDLVISQPWSRATPGSAKTGAGYLTIQNTGSA CHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCC PDRLVAVAGDIAGRIEVHEMAVNNGVMTMRPLEKGLEIEPGKTVALAPGGYHLMLMELKS CCEEEEEECCCCCEEEEEEEEECCCEEEEEHHCCCCEECCCCEEEECCCCEEEEEEHHHH PLKQGDKLPLTLEFEKAGKVAVTLDVQAVGAKGPGGEGGGMMKHDHKM HHHCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA