Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146341088
Identifier: 146341088
GI number: 146341088
Start: 4360098
End: 4360883
Strand: Reverse
Name: 146341088
Synonym: BRADO4159
Alternate gene names: NA
Gene position: 4360883-4360098 (Counterclockwise)
Preceding gene: 146341089
Following gene: 146341087
Centisome position: 58.48
GC content: 68.7
Gene sequence:
>786_bases ATGGACCGACGTGTCTTCAACAGCTCGGTTCTGGCAGGCTCGCTCGCGGGCCTGCTGCTGCCGGGCGCGCAGGCCGAGCA GGCGCCGCGTTCCCTGGGCAAGCCCGTCATCGGCCTGCTGGTCTATCCGGGCATGATCCTGCTCGATCTGACGGGGCCGC TCACCGTCTTCAACATCATGCAGGCGGATGTCCGCCTCATCGCTGCGTCGATGACCCCCGTCGCGACGGACGTCGGAATC GCAGTCGCTCCGACCCACAGCTTCGACGCGGCGCCGGCGGAGCTCGACGTACTGTTCGTGCCGGGCGGGCTGAAGGGCAC CGTCGACGGCATGAACGATGCCCGGACGCTCGACTTCGTCGCCTCGCGCGGCGAGTTGGCGCGCTTCGTCACCAGCGTCT GCACCGGCTCGCTGCTGCTCGGTGCCGCCGGTCTGCTGAAGGGCTTCAACGCGACCTCGCATTGGTACGTGCGCGATCTC CTGCCGCTGATGGGTGCCAAGATGGTGGCCGATCGCGTCGTGACGGACCGCAACCGCGTCACCGCCGGAGGCGTGACCGC GGGCATCGATTTCGGCCTTGCGCTGGCCGCGAAGCTCACCGGCGAGGACAATGCCAAACGTATTCAGCTGCTGATCGAAT ATGATCCGCAGCCGCCGTTTGCTGCGGGATCGCCGGAGCGCGCCGGAGCAGACTCGGCCAATGCCGTGCTGACGCAGCGC GGTCCGTTGATCCGGCAGGCCGAGCAGGCTGCGCGGGCCGCCGGCCAGAGGCTCGGCGTGCCATGA
Upstream 100 bases:
>100_bases CGTGACGCTCGACGTCCAGGCCGTCGGCGCCAAGGGGCCGGGCGGCGAGGGCGGCGGCATGATGAAGCACGATCACAAGA TGTAGGGCAGAGGCACGCGA
Downstream 100 bases:
>100_bases CCATGGGCGTCGCGATCCCAGCTCATCCACGCACTGGCGCTTGCCGGACGAACGGCAGCGCGGGGCGTCCCTGGATCGCG CGCCTGTTGCCGCTGGCCCT
Product: putative DJ-1/PfpI family protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator; AraC Family Transcriptional Regulator; ThiJ/PfpI; DJ-1/PfpI Family Protein; Transcriptional Regulator AraC Family; Isonitrile Hydratase; ThiJ Family Protein; DJ-1/PfpI Family; Intracellular Protease/Amidase; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; Transcriptional Regulatory Protein; AraC Family Transcription Regulator; Transcriptional Regulator DarR; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; GATase1_AraC_1 Family Transcriptional Regulator; Transcriptional Regulator Protein Thij/Pfpi; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; Secreted Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MDRRVFNSSVLAGSLAGLLLPGAQAEQAPRSLGKPVIGLLVYPGMILLDLTGPLTVFNIMQADVRLIAASMTPVATDVGI AVAPTHSFDAAPAELDVLFVPGGLKGTVDGMNDARTLDFVASRGELARFVTSVCTGSLLLGAAGLLKGFNATSHWYVRDL LPLMGAKMVADRVVTDRNRVTAGGVTAGIDFGLALAAKLTGEDNAKRIQLLIEYDPQPPFAAGSPERAGADSANAVLTQR GPLIRQAEQAARAAGQRLGVP
Sequences:
>Translated_261_residues MDRRVFNSSVLAGSLAGLLLPGAQAEQAPRSLGKPVIGLLVYPGMILLDLTGPLTVFNIMQADVRLIAASMTPVATDVGI AVAPTHSFDAAPAELDVLFVPGGLKGTVDGMNDARTLDFVASRGELARFVTSVCTGSLLLGAAGLLKGFNATSHWYVRDL LPLMGAKMVADRVVTDRNRVTAGGVTAGIDFGLALAAKLTGEDNAKRIQLLIEYDPQPPFAAGSPERAGADSANAVLTQR GPLIRQAEQAARAAGQRLGVP >Mature_261_residues MDRRVFNSSVLAGSLAGLLLPGAQAEQAPRSLGKPVIGLLVYPGMILLDLTGPLTVFNIMQADVRLIAASMTPVATDVGI AVAPTHSFDAAPAELDVLFVPGGLKGTVDGMNDARTLDFVASRGELARFVTSVCTGSLLLGAAGLLKGFNATSHWYVRDL LPLMGAKMVADRVVTDRNRVTAGGVTAGIDFGLALAAKLTGEDNAKRIQLLIEYDPQPPFAAGSPERAGADSANAVLTQR GPLIRQAEQAARAAGQRLGVP
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27067; Mature: 27067
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRRVFNSSVLAGSLAGLLLPGAQAEQAPRSLGKPVIGLLVYPGMILLDLTGPLTVFNIM CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCEEEEECCCHHHHHHHH QADVRLIAASMTPVATDVGIAVAPTHSFDAAPAELDVLFVPGGLKGTVDGMNDARTLDFV HHHHHHHHHHCCCCHHCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHH ASRGELARFVTSVCTGSLLLGAAGLLKGFNATSHWYVRDLLPLMGAKMVADRVVTDRNRV HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE TAGGVTAGIDFGLALAAKLTGEDNAKRIQLLIEYDPQPPFAAGSPERAGADSANAVLTQR EECCEEHHHHHHHHHEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECC GPLIRQAEQAARAAGQRLGVP CCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDRRVFNSSVLAGSLAGLLLPGAQAEQAPRSLGKPVIGLLVYPGMILLDLTGPLTVFNIM CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCEEEEECCCHHHHHHHH QADVRLIAASMTPVATDVGIAVAPTHSFDAAPAELDVLFVPGGLKGTVDGMNDARTLDFV HHHHHHHHHHCCCCHHCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHH ASRGELARFVTSVCTGSLLLGAAGLLKGFNATSHWYVRDLLPLMGAKMVADRVVTDRNRV HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE TAGGVTAGIDFGLALAAKLTGEDNAKRIQLLIEYDPQPPFAAGSPERAGADSANAVLTQR EECCEEHHHHHHHHHEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECC GPLIRQAEQAARAAGQRLGVP CCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA