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The map label for this gene is exoR [H]

Identifier: 146341008

GI number: 146341008

Start: 4267327

End: 4268043

Strand: Reverse

Name: exoR [H]

Synonym: BRADO4079

Alternate gene names: 146341008

Gene position: 4268043-4267327 (Counterclockwise)

Preceding gene: 146341009

Following gene: 146341007

Centisome position: 57.24

GC content: 68.48

Gene sequence:

>717_bases
GTGGCTGGCCCGCAGGCGGGTGCGGGCGCACTGCGCAAATCCGTGCCTGCGACCACGGCTGCGACCAACCCCACGCAGTC
CCTCACCGCGCTGCAATATGCGGCGGAGGAGGGCCACCCGGTCGCGCAGTTCAAGCTCGGGCGCATGTATGCCGCCGGCG
ACGGCGTCGCGCGCGACGACATGCGCGCGTTCGACTATTTCAGCCGCATCGCCAATGCGCATGCCGAGGACAGCCCGTCG
GCGCCGCAGGCCCAGATCGTCGCCAATGCCTTCGTCGCGCTCGGCCGCTATTATCTGAGCGGGATCCCGAACACGAAGGT
GAAGGCGGATCCGGACCGCGCCCGCGAGATGTTCTCCTACGCGGCGTCCTATTTCGGCAATGCCGACGCCCAGTACGATC
TGGCGCGGATGTATCTGAAGACGGCCGACGCCTCGCGCGACGATTTCCGCTATGGTGCGCGCTGGCTCGGGCTCGCCGCC
CAGAAGGGCCAGCATCAGGCCCAGGCCTTGCTTGGCCAGATGCTGTTCAACGGTGACCGCCTGCCCCGGCAGCCGGCCCG
CGGCTTGATGTGGCTCACCTTGGCGCGCGACAGCGCCGGTCCGGACGAAGCGTGGATCAAGGAGAGCTACAACCGCGCCT
TTGCCAAGGCGTCGGACGACGACCGCGCCACCGCGCTGCAGATGCTCGAGAGCTGGGTGCAGGGCAAGCGCGAGTAA

Upstream 100 bases:

>100_bases
GATCATTTTCGCACTGTTGCTGGGGGTTGCCCCGCTCGCGCTGCCGACGCCGTCGTTCGCGTTCGATGGCGCGCCGGTCA
ACCAGGAGCCGGCGATCCCT

Downstream 100 bases:

>100_bases
GCGGAGCGGAATGCATCGCGTTCCCTCCGCGCGACGGAGGGATTGAGATGATCATTCGCGATGCGACCCGCGACGACGCT
TCGGCCGCCTGTGCCGTGCT

Product: TPR repeat-containing exopolysaccharide regulatory protein exoR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MAGPQAGAGALRKSVPATTAATNPTQSLTALQYAAEEGHPVAQFKLGRMYAAGDGVARDDMRAFDYFSRIANAHAEDSPS
APQAQIVANAFVALGRYYLSGIPNTKVKADPDRAREMFSYAASYFGNADAQYDLARMYLKTADASRDDFRYGARWLGLAA
QKGQHQAQALLGQMLFNGDRLPRQPARGLMWLTLARDSAGPDEAWIKESYNRAFAKASDDDRATALQMLESWVQGKRE

Sequences:

>Translated_238_residues
MAGPQAGAGALRKSVPATTAATNPTQSLTALQYAAEEGHPVAQFKLGRMYAAGDGVARDDMRAFDYFSRIANAHAEDSPS
APQAQIVANAFVALGRYYLSGIPNTKVKADPDRAREMFSYAASYFGNADAQYDLARMYLKTADASRDDFRYGARWLGLAA
QKGQHQAQALLGQMLFNGDRLPRQPARGLMWLTLARDSAGPDEAWIKESYNRAFAKASDDDRATALQMLESWVQGKRE
>Mature_237_residues
AGPQAGAGALRKSVPATTAATNPTQSLTALQYAAEEGHPVAQFKLGRMYAAGDGVARDDMRAFDYFSRIANAHAEDSPSA
PQAQIVANAFVALGRYYLSGIPNTKVKADPDRAREMFSYAASYFGNADAQYDLARMYLKTADASRDDFRYGARWLGLAAQ
KGQHQAQALLGQMLFNGDRLPRQPARGLMWLTLARDSAGPDEAWIKESYNRAFAKASDDDRATALQMLESWVQGKRE

Specific function: Negatively modulates exopolysaccharide (EPS) biosynthesis [H]

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 25993; Mature: 25862

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPQAGAGALRKSVPATTAATNPTQSLTALQYAAEEGHPVAQFKLGRMYAAGDGVARDD
CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCHHEECCCCCCHHH
MRAFDYFSRIANAHAEDSPSAPQAQIVANAFVALGRYYLSGIPNTKVKADPDRAREMFSY
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AASYFGNADAQYDLARMYLKTADASRDDFRYGARWLGLAAQKGQHQAQALLGQMLFNGDR
HHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
LPRQPARGLMWLTLARDSAGPDEAWIKESYNRAFAKASDDDRATALQMLESWVQGKRE
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AGPQAGAGALRKSVPATTAATNPTQSLTALQYAAEEGHPVAQFKLGRMYAAGDGVARDD
CCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCHHEECCCCCCHHH
MRAFDYFSRIANAHAEDSPSAPQAQIVANAFVALGRYYLSGIPNTKVKADPDRAREMFSY
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AASYFGNADAQYDLARMYLKTADASRDDFRYGARWLGLAAQKGQHQAQALLGQMLFNGDR
HHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
LPRQPARGLMWLTLARDSAGPDEAWIKESYNRAFAKASDDDRATALQMLESWVQGKRE
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1711027; 11481430 [H]