Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146340947

Identifier: 146340947

GI number: 146340947

Start: 4212354

End: 4212878

Strand: Direct

Name: 146340947

Synonym: BRADO4018

Alternate gene names: NA

Gene position: 4212354-4212878 (Clockwise)

Preceding gene: 146340940

Following gene: 146340948

Centisome position: 56.49

GC content: 64.57

Gene sequence:

>525_bases
GTGCTTCTCGGCCTCGCCGGCGTGCTCGCCACGTCCCAGCTGCACGCGCAGACCACGGCCGCCAACGAGCCCGCCGGCAT
CATGACCGCGATCTACACCCGCGTCGCCAAGGGCAAGGGCGAGGACGGCGGCAACTTCGTCATTGGAGACAAGGCGGCGC
GCGCAAAATACCTGTCGAAGGCGCTGGCCGCCCAATGGGCCAAGATGGATGCCCGCACGCCCAAGGGCGAAGTCGGCGCG
GTCGATTTCGATCCGATCACCAATTCGCAGGATCCGGATGTCGCCTCGTTCAAGGTGGTTTCGGAGACGCAGGAGGCCGA
CAAGGCGACCATCGCCGTCACCATCACCGGCCATCGGCTGGAGCGCAAGGAACAGGCCGACAACGTCATTCGTTACGACT
TCGCGCGCGATGCCCGCCAATGGAAGATCGACGACATCCGCGGCGCCATCGACGGCAAGCCGTGGTCGATCCGCGACATG
CTGGCCGAGTTCATCAAGCTCACCGACAAATCGAAACGAAGGTAG

Upstream 100 bases:

>100_bases
ATGCCGAGCCCGTGCGACAAACCCGTGCCGGCTGCGCATTCCCTGCATGTCACCGCGCGCCAAATCTGATTTGAGGACAC
CTATGATCGATCGTCGCTTC

Downstream 100 bases:

>100_bases
CGCCCAAGAGGAGTGACCATGACCGCCGTTCGCGACAACAAGGCCGAGAGCCGCTTCGAGCTCGACGTCGAAGGCAGCCT
CGCCTTCGCCAATTATCGCG

Product: putative signal peptide

Products: NA

Alternate protein names: Signal Peptide

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MLLGLAGVLATSQLHAQTTAANEPAGIMTAIYTRVAKGKGEDGGNFVIGDKAARAKYLSKALAAQWAKMDARTPKGEVGA
VDFDPITNSQDPDVASFKVVSETQEADKATIAVTITGHRLERKEQADNVIRYDFARDARQWKIDDIRGAIDGKPWSIRDM
LAEFIKLTDKSKRR

Sequences:

>Translated_174_residues
MLLGLAGVLATSQLHAQTTAANEPAGIMTAIYTRVAKGKGEDGGNFVIGDKAARAKYLSKALAAQWAKMDARTPKGEVGA
VDFDPITNSQDPDVASFKVVSETQEADKATIAVTITGHRLERKEQADNVIRYDFARDARQWKIDDIRGAIDGKPWSIRDM
LAEFIKLTDKSKRR
>Mature_174_residues
MLLGLAGVLATSQLHAQTTAANEPAGIMTAIYTRVAKGKGEDGGNFVIGDKAARAKYLSKALAAQWAKMDARTPKGEVGA
VDFDPITNSQDPDVASFKVVSETQEADKATIAVTITGHRLERKEQADNVIRYDFARDARQWKIDDIRGAIDGKPWSIRDM
LAEFIKLTDKSKRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19005; Mature: 19005

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLGLAGVLATSQLHAQTTAANEPAGIMTAIYTRVAKGKGEDGGNFVIGDKAARAKYLSK
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHH
ALAAQWAKMDARTPKGEVGAVDFDPITNSQDPDVASFKVVSETQEADKATIAVTITGHRL
HHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHEEEHHHHCCCCCEEEEEEEECCHH
ERKEQADNVIRYDFARDARQWKIDDIRGAIDGKPWSIRDMLAEFIKLTDKSKRR
HHHHHHCCEEEHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLLGLAGVLATSQLHAQTTAANEPAGIMTAIYTRVAKGKGEDGGNFVIGDKAARAKYLSK
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHH
ALAAQWAKMDARTPKGEVGAVDFDPITNSQDPDVASFKVVSETQEADKATIAVTITGHRL
HHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHEEEHHHHCCCCCEEEEEEEECCHH
ERKEQADNVIRYDFARDARQWKIDDIRGAIDGKPWSIRDMLAEFIKLTDKSKRR
HHHHHHCCEEEHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA