Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146340942

Identifier: 146340942

GI number: 146340942

Start: 4206360

End: 4206929

Strand: Reverse

Name: 146340942

Synonym: BRADO4013

Alternate gene names: NA

Gene position: 4206929-4206360 (Counterclockwise)

Preceding gene: 146340943

Following gene: 146340941

Centisome position: 56.42

GC content: 65.79

Gene sequence:

>570_bases
ATGAGGATGGTGTTCGGCAAGTCGCTGACCCCTGTGGCGGCGCTCGCGATCGTGACGACGGCCCTGACGATCACGGCCCT
GACCACGGCGGATGCGCATGGGCCCACCCGGCGCAAGGTGCAGGAGCATGTCGAGATCAACGCCGCGCCCGCGAAGGTGT
GGGCGGTCATGGGCAATTTTCAGGACATGAGCTGGCTCGGCGTCGTCGACAAGACCGCGGGCGACAAGGGCAACGAGATC
GGCGCGACCCGCAAGCTGACCCTGAAGGGCGGCGCGACCGTCGACGAGGAGCTGTACAAATACGACGCCGAGAAGATGAG
CTACTCGTACCGCATCACGGCTGTCGACGTGAAGGTGCTGCCGGTGACGAACTACTCGTCGACCATCGCGGTGACGCCGA
GCGCCGACGGCAAGGGCAGCGTCGTCGAATGGACCGGCGCCTTCTACCGCGGCTTCCCCAACAATGATCCTCCGCCGGAG
CTCAGCGACGAGGCGGCCGTGAACGCGGTGACCGGATTGTACAAGGGCGGGCTCGAGGGGCTGAAGACGAAGGTGGAGAG
CGGAAGCTGA

Upstream 100 bases:

>100_bases
CCACGACGCCGTCTTTTTTGTTGCAACAATCCGGAGCGGTGCAAAGATGACGCCGCCGAGCGCAGATGTGCCGGCCAATG
AAAGAGACCGAGGAAACGAG

Downstream 100 bases:

>100_bases
TCGGAGTGACCATGTTGCTCCAGGCGCAGGGCGCTCCCTCTGCCCGTTGTTACGGCGAGAGGGAGCCGACCGTCGATGAC
ATGCCATCTCGGCTCCAGCG

Product: putative signal peptide

Products: NA

Alternate protein names: Polyketide Cyclase/Dehydrase; Signal Peptide; Bet V I Allergen

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRMVFGKSLTPVAALAIVTTALTITALTTADAHGPTRRKVQEHVEINAAPAKVWAVMGNFQDMSWLGVVDKTAGDKGNEI
GATRKLTLKGGATVDEELYKYDAEKMSYSYRITAVDVKVLPVTNYSSTIAVTPSADGKGSVVEWTGAFYRGFPNNDPPPE
LSDEAAVNAVTGLYKGGLEGLKTKVESGS

Sequences:

>Translated_189_residues
MRMVFGKSLTPVAALAIVTTALTITALTTADAHGPTRRKVQEHVEINAAPAKVWAVMGNFQDMSWLGVVDKTAGDKGNEI
GATRKLTLKGGATVDEELYKYDAEKMSYSYRITAVDVKVLPVTNYSSTIAVTPSADGKGSVVEWTGAFYRGFPNNDPPPE
LSDEAAVNAVTGLYKGGLEGLKTKVESGS
>Mature_189_residues
MRMVFGKSLTPVAALAIVTTALTITALTTADAHGPTRRKVQEHVEINAAPAKVWAVMGNFQDMSWLGVVDKTAGDKGNEI
GATRKLTLKGGATVDEELYKYDAEKMSYSYRITAVDVKVLPVTNYSSTIAVTPSADGKGSVVEWTGAFYRGFPNNDPPPE
LSDEAAVNAVTGLYKGGLEGLKTKVESGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20072; Mature: 20072

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMVFGKSLTPVAALAIVTTALTITALTTADAHGPTRRKVQEHVEINAAPAKVWAVMGNF
CCEECCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCHHEEEEECCCC
QDMSWLGVVDKTAGDKGNEIGATRKLTLKGGATVDEELYKYDAEKMSYSYRITAVDVKVL
CCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEEEEEEEE
PVTNYSSTIAVTPSADGKGSVVEWTGAFYRGFPNNDPPPELSDEAAVNAVTGLYKGGLEG
EECCCCCEEEEECCCCCCCCEEEECCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH
LKTKVESGS
HHHHCCCCC
>Mature Secondary Structure
MRMVFGKSLTPVAALAIVTTALTITALTTADAHGPTRRKVQEHVEINAAPAKVWAVMGNF
CCEECCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCHHEEEEECCCC
QDMSWLGVVDKTAGDKGNEIGATRKLTLKGGATVDEELYKYDAEKMSYSYRITAVDVKVL
CCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEEEEEEEE
PVTNYSSTIAVTPSADGKGSVVEWTGAFYRGFPNNDPPPELSDEAAVNAVTGLYKGGLEG
EECCCCCEEEEECCCCCCCCEEEECCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH
LKTKVESGS
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA