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The map label for this gene is kaiC

Identifier: 146340913

GI number: 146340913

Start: 4175936

End: 4177465

Strand: Reverse

Name: kaiC

Synonym: BRADO3982

Alternate gene names: NA

Gene position: 4177465-4175936 (Counterclockwise)

Preceding gene: 146340914

Following gene: 146340912

Centisome position: 56.02

GC content: 64.44

Gene sequence:

>1530_bases
ATGGCTCTGACTGGAGCGCATGAGCTCGAGAAGCTGCGCACGGGCATCGCCGGCTTCGACCAGATCGCCAATGGCGGGCT
GCCGCTCAATCGCACCACCCTGGTTGCGGGCACCGCCGGCAGCGGCAAGACTGTCTTGGCGCTGCAATACCTGATCACAG
GCGTCAGGACGACCGGGGAGCATGGGGTTTGCGTGACCTTCGAGGAGGCGCCGGAGGATCTGATCCGCAATATCAGATCA
TTCGGATGGGAGCTCGAAAACATGATCGCGCGGCGCCAGGTGGCCATCGTCGACGTGACCCCGGAAGACGGTGAGGAAAC
GATCGAGGCCGGTACATTCGACTTCTCCGCGCTGCTGGCCCGCATCGAGGCCGCCGTCCGCAACGTCAATGCGAAGCGGC
TGATCATGGACTCGATCGGCGCGCTGTTTCCGCAGTTCAGCGACGCCAATCTGGTCCGTCGCGAACTCCACCGGATCACC
GTCCGGTTGCGCCAGCTCGGCGTCACCTCGATGATCACCGTCGAGCGTCCGGGCGAGGATGGACCGCTGGCACGCTTCGG
CATCGAGGAGTTCGTCGCCGACAACGTGCTCGTGCTTCGCAACCGCCTGGAGCATGAGAAGCGGCGGCGGACGATCGAGA
TCCTGAAGTTCCGCGGCGCGACCCATCACAAGGGCGAATATCCGTTCACCGTCGACCATGCGGACGGCATCACGATCCTG
CCGTTGTCGGCGATGGAGCTGCAGCAGCACTCGTCCGATATTCGTGTGTCGTCCGGGGTGCCCGAGCTCGACGCGATGTG
CGGCGGCGGCATCTATCGCGATTCCGTCATCCTGGTCAGCGGCGCGACCGGGACCGGCAAGACGCTCATGGTGACCCACT
ATCTGCAGGCGGCGATTGCGAGCGGGCAGCGTGCGATGCTGATCGCCGCGGAGGAGAGCCGCGACCAGCTGACGCGCAAT
GCCCTCAACTGGGGGATGGATTTCGACGCGGCCGAGCGGAGCGGCATGCTGCGGATCGTCGCGCGCTATCCTGAGACGAT
GGGGCTGGAGGATCACCTGCTCTACATCAGGCGCGAGATGGCCGATTTCCGCCCGGATCGGATCGCGGTCGACAGCCTTT
CTGCCTTCGAGCGGGCGGGCACGATCAAGTCCTATCGCGAATTCGTGGTGGCGCTGACGAGCGGCATCAAGCAGTTCGGC
GTGACCGGGCTGTTCACCAACACGACGGCCATGCTGCTCGGTGGGGAATCGGTGACGGAGAGCCACATCTCGACGATCAC
CGACATGATCGTGCTGCTACGCTATGTCGAGCTCCACGGCGAGATGCGGCGCGGGCTCGCCGTGCTCAAGATGCGCGGCA
CACAGCATGACAAGGATATCCGCGAATATGTCATCGACGGCGGTGGCATGCATCTCCGCGAGCCGTTCCGCGAGATCCAC
GGCATTCTCTCGGGCGCGCCGACCTACACCTTCGCGCGCGAGCGGGACAATCTGGCCGGGATGTTCGAGATGCCGAGAAC
GAGGGATTGA

Upstream 100 bases:

>100_bases
ATCATCGGCGATCTCAGTGACACGCGGCGGGTGCTGCTGGCGCTCGGCATCGCCCATGATCGATCTCACGCATCGGAGAC
GCAGGACGGGGAGACAGGAA

Downstream 100 bases:

>100_bases
TTGATGCTGCAGACGCCGTCCCATCGCATGCTCCTGGTTGCTGACGATGCGTTCGATCCGTCGCAGGTGTTGAGACGTCT
GTTTGCCGCGCATCAACCGC

Product: circadian clock protein KaiC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MALTGAHELEKLRTGIAGFDQIANGGLPLNRTTLVAGTAGSGKTVLALQYLITGVRTTGEHGVCVTFEEAPEDLIRNIRS
FGWELENMIARRQVAIVDVTPEDGEETIEAGTFDFSALLARIEAAVRNVNAKRLIMDSIGALFPQFSDANLVRRELHRIT
VRLRQLGVTSMITVERPGEDGPLARFGIEEFVADNVLVLRNRLEHEKRRRTIEILKFRGATHHKGEYPFTVDHADGITIL
PLSAMELQQHSSDIRVSSGVPELDAMCGGGIYRDSVILVSGATGTGKTLMVTHYLQAAIASGQRAMLIAAEESRDQLTRN
ALNWGMDFDAAERSGMLRIVARYPETMGLEDHLLYIRREMADFRPDRIAVDSLSAFERAGTIKSYREFVVALTSGIKQFG
VTGLFTNTTAMLLGGESVTESHISTITDMIVLLRYVELHGEMRRGLAVLKMRGTQHDKDIREYVIDGGGMHLREPFREIH
GILSGAPTYTFARERDNLAGMFEMPRTRD

Sequences:

>Translated_509_residues
MALTGAHELEKLRTGIAGFDQIANGGLPLNRTTLVAGTAGSGKTVLALQYLITGVRTTGEHGVCVTFEEAPEDLIRNIRS
FGWELENMIARRQVAIVDVTPEDGEETIEAGTFDFSALLARIEAAVRNVNAKRLIMDSIGALFPQFSDANLVRRELHRIT
VRLRQLGVTSMITVERPGEDGPLARFGIEEFVADNVLVLRNRLEHEKRRRTIEILKFRGATHHKGEYPFTVDHADGITIL
PLSAMELQQHSSDIRVSSGVPELDAMCGGGIYRDSVILVSGATGTGKTLMVTHYLQAAIASGQRAMLIAAEESRDQLTRN
ALNWGMDFDAAERSGMLRIVARYPETMGLEDHLLYIRREMADFRPDRIAVDSLSAFERAGTIKSYREFVVALTSGIKQFG
VTGLFTNTTAMLLGGESVTESHISTITDMIVLLRYVELHGEMRRGLAVLKMRGTQHDKDIREYVIDGGGMHLREPFREIH
GILSGAPTYTFARERDNLAGMFEMPRTRD
>Mature_508_residues
ALTGAHELEKLRTGIAGFDQIANGGLPLNRTTLVAGTAGSGKTVLALQYLITGVRTTGEHGVCVTFEEAPEDLIRNIRSF
GWELENMIARRQVAIVDVTPEDGEETIEAGTFDFSALLARIEAAVRNVNAKRLIMDSIGALFPQFSDANLVRRELHRITV
RLRQLGVTSMITVERPGEDGPLARFGIEEFVADNVLVLRNRLEHEKRRRTIEILKFRGATHHKGEYPFTVDHADGITILP
LSAMELQQHSSDIRVSSGVPELDAMCGGGIYRDSVILVSGATGTGKTLMVTHYLQAAIASGQRAMLIAAEESRDQLTRNA
LNWGMDFDAAERSGMLRIVARYPETMGLEDHLLYIRREMADFRPDRIAVDSLSAFERAGTIKSYREFVVALTSGIKQFGV
TGLFTNTTAMLLGGESVTESHISTITDMIVLLRYVELHGEMRRGLAVLKMRGTQHDKDIREYVIDGGGMHLREPFREIHG
ILSGAPTYTFARERDNLAGMFEMPRTRD

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR013503
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 56384; Mature: 56253

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS51146 KAIC ; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTGAHELEKLRTGIAGFDQIANGGLPLNRTTLVAGTAGSGKTVLALQYLITGVRTTGE
CCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC
HGVCVTFEEAPEDLIRNIRSFGWELENMIARRQVAIVDVTPEDGEETIEAGTFDFSALLA
CCEEEEEHHCHHHHHHHHHHHCCHHHHHHHHCEEEEEEECCCCCHHHHHCCCCCHHHHHH
RIEAAVRNVNAKRLIMDSIGALFPQFSDANLVRRELHRITVRLRQLGVTSMITVERPGED
HHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
GPLARFGIEEFVADNVLVLRNRLEHEKRRRTIEILKFRGATHHKGEYPFTVDHADGITIL
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEE
PLSAMELQQHSSDIRVSSGVPELDAMCGGGIYRDSVILVSGATGTGKTLMVTHYLQAAIA
ECHHHHHHHCCCCEEECCCCCHHHHHHCCCEEECCEEEEECCCCCCCCHHHHHHHHHHHH
SGQRAMLIAAEESRDQLTRNALNWGMDFDAAERSGMLRIVARYPETMGLEDHLLYIRREM
CCCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCCCCCCHHHHHHHHHHH
ADFRPDRIAVDSLSAFERAGTIKSYREFVVALTSGIKQFGVTGLFTNTTAMLLGGESVTE
HHCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCHHHH
SHISTITDMIVLLRYVELHGEMRRGLAVLKMRGTQHDKDIREYVIDGGGMHLREPFREIH
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHH
GILSGAPTYTFARERDNLAGMFEMPRTRD
HHHCCCCCEEEHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALTGAHELEKLRTGIAGFDQIANGGLPLNRTTLVAGTAGSGKTVLALQYLITGVRTTGE
CCCCHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC
HGVCVTFEEAPEDLIRNIRSFGWELENMIARRQVAIVDVTPEDGEETIEAGTFDFSALLA
CCEEEEEHHCHHHHHHHHHHHCCHHHHHHHHCEEEEEEECCCCCHHHHHCCCCCHHHHHH
RIEAAVRNVNAKRLIMDSIGALFPQFSDANLVRRELHRITVRLRQLGVTSMITVERPGED
HHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
GPLARFGIEEFVADNVLVLRNRLEHEKRRRTIEILKFRGATHHKGEYPFTVDHADGITIL
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEE
PLSAMELQQHSSDIRVSSGVPELDAMCGGGIYRDSVILVSGATGTGKTLMVTHYLQAAIA
ECHHHHHHHCCCCEEECCCCCHHHHHHCCCEEECCEEEEECCCCCCCCHHHHHHHHHHHH
SGQRAMLIAAEESRDQLTRNALNWGMDFDAAERSGMLRIVARYPETMGLEDHLLYIRREM
CCCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCCCCCCHHHHHHHHHHH
ADFRPDRIAVDSLSAFERAGTIKSYREFVVALTSGIKQFGVTGLFTNTTAMLLGGESVTE
HHCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCHHHH
SHISTITDMIVLLRYVELHGEMRRGLAVLKMRGTQHDKDIREYVIDGGGMHLREPFREIH
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHH
GILSGAPTYTFARERDNLAGMFEMPRTRD
HHHCCCCCEEEHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]