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The map label for this gene is aapJ [H]

Identifier: 146340850

GI number: 146340850

Start: 4091342

End: 4092358

Strand: Reverse

Name: aapJ [H]

Synonym: BRADO3913

Alternate gene names: 146340850

Gene position: 4092358-4091342 (Counterclockwise)

Preceding gene: 146340853

Following gene: 146340849

Centisome position: 54.88

GC content: 63.52

Gene sequence:

>1017_bases
ATGAAACGCGTCACTCTGGCTCTCACTCTTGCTCTCGCCCCTGTGCTGGCGAGCGTCGGCGCCCAGGCCGAAACGCTCAA
GACCGTGAAGGATCGCGGCATGCTCGCCTGCGGCGTCAGTCAGGGCCTGCCCGGTTTCTCGAATCCGGACGACAAGGGCA
ACTGGACCGGGCTCGACGTCGACGTCTGCCGCGCCATCGCCGCTGCGATCTTCAACGACCCGACCAAGGTCAAGTATGTT
CCGCTGTCGGCCAAGGACCGCTTTACTGCACTGCAGTCTGGCGAGGTGGACGTGCTGTCCCGCAACACCACCTGGACCCT
GTCGCGCGACACGTCGCTCGGCGCCAACTTCGCCGGTATCACCTATTATGACGGCCAGGGCTTCATGGTGAAGAAGGCGC
TCAAGGTCAATTCGGCGCTCGAGCTCAACAGCGCCTCGGTTTGCGTGCAGACCGGCACGACCACCGAGCAGAACCTCGCC
GACTACTTCAAGGCCAACAAGATGAAGTACGAGGTGATCGCGTTCGCCGGCGCCGACGAGACCGTGAAGGCCTATGAGTC
CGGCCGGTGCGACGTGTTCACGACCGACGTCTCCGGCCTCTACGCCGAGCGCCTGAAGCTCGCCAATCCGGCTGACCACG
TCGTGCTGCCCGAGGTGATCTCGAAGGAGCCGCTCGGTCCGATGGTGCGCCACGGTGACGACCAGTGGTTCGACATCGTG
AAGTGGACGCTGTTCGGGCTGATCACGGCCGAGGAAATGGGCGTCACCCAGGCCAACGTCGACGAGATGGCCAAGTCCGA
CAAGCCCGACTTCAAGCGCGCCTTCGGCACCGACGGCAATCTCGGCGAGCAGCTCGGTCTCACCAAGGACTGGTTCTCGC
GGATCGTCAAAGCTGTCGGCAATTACGGCGAAATGTATGACCGCAATGTCGGTTCCGGCTCCAAGCTGCAGATCGCGCGC
GGTCTGAACCAGCTCTGGAACAAGGGCGGCCTGCAGTACGCGCCGCCGATCCGCTAA

Upstream 100 bases:

>100_bases
ATATTCTTGGTATGGCGTTTGCAAAGGCGGTTTCAGGTCGGCCCCAACCACGCGCTGAGATTTCATCGCTCCCCAAGGAC
GACCGCGAAAGGCTGTATTT

Downstream 100 bases:

>100_bases
CAGCTGCACGATATCGGGGCTGCGGCGAATGAGTATCGAAGCGAGGCTACCGCCTCCGCAATATGGGCTTCGTTTGAAGC
GCATGCTGGGGGGCAAGGCA

Product: putative amino-acid ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MKRVTLALTLALAPVLASVGAQAETLKTVKDRGMLACGVSQGLPGFSNPDDKGNWTGLDVDVCRAIAAAIFNDPTKVKYV
PLSAKDRFTALQSGEVDVLSRNTTWTLSRDTSLGANFAGITYYDGQGFMVKKALKVNSALELNSASVCVQTGTTTEQNLA
DYFKANKMKYEVIAFAGADETVKAYESGRCDVFTTDVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDIV
KWTLFGLITAEEMGVTQANVDEMAKSDKPDFKRAFGTDGNLGEQLGLTKDWFSRIVKAVGNYGEMYDRNVGSGSKLQIAR
GLNQLWNKGGLQYAPPIR

Sequences:

>Translated_338_residues
MKRVTLALTLALAPVLASVGAQAETLKTVKDRGMLACGVSQGLPGFSNPDDKGNWTGLDVDVCRAIAAAIFNDPTKVKYV
PLSAKDRFTALQSGEVDVLSRNTTWTLSRDTSLGANFAGITYYDGQGFMVKKALKVNSALELNSASVCVQTGTTTEQNLA
DYFKANKMKYEVIAFAGADETVKAYESGRCDVFTTDVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDIV
KWTLFGLITAEEMGVTQANVDEMAKSDKPDFKRAFGTDGNLGEQLGLTKDWFSRIVKAVGNYGEMYDRNVGSGSKLQIAR
GLNQLWNKGGLQYAPPIR
>Mature_338_residues
MKRVTLALTLALAPVLASVGAQAETLKTVKDRGMLACGVSQGLPGFSNPDDKGNWTGLDVDVCRAIAAAIFNDPTKVKYV
PLSAKDRFTALQSGEVDVLSRNTTWTLSRDTSLGANFAGITYYDGQGFMVKKALKVNSALELNSASVCVQTGTTTEQNLA
DYFKANKMKYEVIAFAGADETVKAYESGRCDVFTTDVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDIV
KWTLFGLITAEEMGVTQANVDEMAKSDKPDFKRAFGTDGNLGEQLGLTKDWFSRIVKAVGNYGEMYDRNVGSGSKLQIAR
GLNQLWNKGGLQYAPPIR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=232, Percent_Identity=26.7241379310345, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36714; Mature: 36714

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVTLALTLALAPVLASVGAQAETLKTVKDRGMLACGVSQGLPGFSNPDDKGNWTGLDV
CCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEHHCCCCCCCCCCCCCCCCCCCH
DVCRAIAAAIFNDPTKVKYVPLSAKDRFTALQSGEVDVLSRNTTWTLSRDTSLGANFAGI
HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCEE
TYYDGQGFMVKKALKVNSALELNSASVCVQTGTTTEQNLADYFKANKMKYEVIAFAGADE
EEECCCCEEEHHHHHHCCCEEECCCEEEEEECCCCHHHHHHHHHHCCEEEEEEEEECCCH
TVKAYESGRCDVFTTDVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDIV
HHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCEECHHHHCCCCCCHHHHCCCCHHHHHH
KWTLFGLITAEEMGVTQANVDEMAKSDKPDFKRAFGTDGNLGEQLGLTKDWFSRIVKAVG
HHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHCCCCCCCHHHCCCCHHHHHHHHHHHC
NYGEMYDRNVGSGSKLQIARGLNQLWNKGGLQYAPPIR
CHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKRVTLALTLALAPVLASVGAQAETLKTVKDRGMLACGVSQGLPGFSNPDDKGNWTGLDV
CCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEHHCCCCCCCCCCCCCCCCCCCH
DVCRAIAAAIFNDPTKVKYVPLSAKDRFTALQSGEVDVLSRNTTWTLSRDTSLGANFAGI
HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCEE
TYYDGQGFMVKKALKVNSALELNSASVCVQTGTTTEQNLADYFKANKMKYEVIAFAGADE
EEECCCCEEEHHHHHHCCCEEECCCEEEEEECCCCHHHHHHHHHHCCEEEEEEEEECCCH
TVKAYESGRCDVFTTDVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDIV
HHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCEECHHHHCCCCCCHHHHCCCCHHHHHH
KWTLFGLITAEEMGVTQANVDEMAKSDKPDFKRAFGTDGNLGEQLGLTKDWFSRIVKAVG
HHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHCCCCCCCHHHCCCCHHHHHHHHHHHC
NYGEMYDRNVGSGSKLQIARGLNQLWNKGGLQYAPPIR
CHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]