Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is fusA [H]
Identifier: 146340749
GI number: 146340749
Start: 3976161
End: 3978182
Strand: Direct
Name: fusA [H]
Synonym: BRADO3806
Alternate gene names: 146340749
Gene position: 3976161-3978182 (Clockwise)
Preceding gene: 146340748
Following gene: 146340754
Centisome position: 53.32
GC content: 69.24
Gene sequence:
>2022_bases ATGGCGCATGTCGACGCCGGCAAGACCACCTTGACCGAGCGCATCCTGCTCGACACCGGCAAGATCCATCAGGCCGGCGA CGTTCACACCGGCAACACCGAGACCGACTCCCATGCACTCGAGAAGAAGCATGGGATCACGATCTCGGCGGCGGCGATCT CGTGCGAATGGCGTGATGCGTTCATCACCATCATCGACACGCCCGGCCATGTCGATTTCCAGATCGAGGTCGAGCGCTCA CTGCGCGTGCTCGACGGCGCGATCGCCGTGTTCTCGGCGGTCTCCGGCGTCGAGCCGCAGTCGGAAACGGTCTGGCGACA GGCCGACCGGCTCGGCGTGCCGCGGCTGTGCTTCGTCAACAAGATGGACCAGGTCGGAGCCGATCTGCAGCGGACGGTCG AGATGATCGCCGATCGTCTCGGCGCCACGCCGCTCGTCCTGCAACTGCCGCTTCGAGGCGAGGACGGCTTCGCCGGCGTG GTCGACCTCGTGGCGATGAAGGCGTTGTACTGGGATGGAGCGCAGCCGCAGCCATCGGCCGGCGCCATCCCGGAAGAGCT GCGCAGCGCGGCCGAGCGACAGCGACAGCGTCTGCTGGAGACGCTGGCGGATCAGGACGCGGCGATCATGGCGGCCTATG TCGGCGGTGAGACGATCAGCGCGGCTGACCTCAAGGCGGCGATCCGCAGGGCGTGCCTCGCGGGACGGCTTACGCCTGTG CTGTGCGGCTCGGCCTACCGGAACGTCGGCGTGCATCCGCTGCTCGACGCCATCGTCGACTACGCGCCGGGTCCGGAGGA CCGGCCGGCGGTCGCGGGGCTAGACCCGCGCAGCGGCGCGGCCGAGCATCGGTTGCCGCGTGCGGACCAGCCATTCGCGG CGCTGGTGTCGAAGGTGCAGGCGAGCCGTTTCGGCACGCTGGCGTTCGTCAGGGTCTACGCCGGTCGTGTCACGGCGGGC ACGTCGGTGACCAATGCGACGTCCGATCGGACCGAGCGGATCGGCCGGCTGCTGCGGATGCAGGCCGATGCGCAGATCGA GATCGACGAAGCCCGTGCGGGCGACGTCGTCGCGGTCGTTGGCCTGAAGTCGGTCGTAGCCGGCGACACGTTGAGCGATC CGGCGCACCCGATCGTGCTGGACGGCTTTGTCATTCCGGAGCCGGTGATCGAGGCGGTGGTCGAGCCGCGGCTTGGCCAG GACCAGGAACGGCTGGGGCAGGCCCTGGCGCTGATGGCGCGCAGCGATCCGTCGCTGCGCGTCGTCGTCGACGCGGACAG CGGCCAGACGCTGCTCCGCGGCATGGGCGAGTTGCATCTGCAGATCGCCGTCGAACGATTGAAGGAGGACTACAATGTCG ATGCTGTCATCGGCGCCCCGGAGGTGGCCTATCGTGCGGCCGCGTCGCGGCCGAGCGAGGTCGATCACACCCTGCGCAAG CAGAGTGGCGGCCCCGGCCAGATGGCGCGCGTTCGCCTCGCCTTCGCGCCCTTGGAGGAGGGCGGCGAGGGACTCGTATT CGTCGACGAGACCGTCGGCGGCGCGATCCCGCGCGAGTTCATTCCGTCGATCGAGAAGGCGCTGCGCCAGTCGCTGCGCG ACGGCGGGCCGGGCGGATATCCCGTGCTCGGCCAGCAAGTGACCCTCCTGGACGGCGCCTTCCATCAGAAGGATTCGTCC GGGCTGGCCTTCGAGCTGGCGACCAGAGAGGCATTCCGGATCGGCTTCGAACGGGCCGCTCCGATCCTGCTCGAGCCCGT GATGCGGGTCGTGGTGACGACGCCCGAGGACTATCTCGGCGGCATCATCGGCGATCTGCAGAGCCGGCGCGGCCGCATCG TCGCGACCGAGCCGATCCCGCGCGGGCAGGAGGTCATCGCCGAAGTGCCGCTGGCGCGGTTGTTCAACTACGTCAGCGCG CTGCGGTCGCTGTCGCAGGGGCGCGCCGTCCACGCGATGGCGTTCTCGCGCTATGCGCCGGCGCCGATAGGCGTCGCTGA GAAGCTGATCGCGACGGCGTGA
Upstream 100 bases:
>100_bases TCCTCACGGATTCGCGGCGCGATGCCGCATGGCTCGTCTTGTCCTGAAGAGACTCCAGCGGAGTTTGAAGATGACCCGCA CGTTAAGAAATATCGGCATC
Downstream 100 bases:
>100_bases CGACAACAAGAGATGAGCGGCGAGCAGCCGCTCATCTCATTCTCGCTTCAATTCGCCAGAAACGCCATCGAGATCACGTG CTCGTAGCGACCATCGATCC
Product: protein chain elongation factor EF-G, GTP-binding
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 673; Mature: 672
Protein sequence:
>673_residues MAHVDAGKTTLTERILLDTGKIHQAGDVHTGNTETDSHALEKKHGITISAAAISCEWRDAFITIIDTPGHVDFQIEVERS LRVLDGAIAVFSAVSGVEPQSETVWRQADRLGVPRLCFVNKMDQVGADLQRTVEMIADRLGATPLVLQLPLRGEDGFAGV VDLVAMKALYWDGAQPQPSAGAIPEELRSAAERQRQRLLETLADQDAAIMAAYVGGETISAADLKAAIRRACLAGRLTPV LCGSAYRNVGVHPLLDAIVDYAPGPEDRPAVAGLDPRSGAAEHRLPRADQPFAALVSKVQASRFGTLAFVRVYAGRVTAG TSVTNATSDRTERIGRLLRMQADAQIEIDEARAGDVVAVVGLKSVVAGDTLSDPAHPIVLDGFVIPEPVIEAVVEPRLGQ DQERLGQALALMARSDPSLRVVVDADSGQTLLRGMGELHLQIAVERLKEDYNVDAVIGAPEVAYRAAASRPSEVDHTLRK QSGGPGQMARVRLAFAPLEEGGEGLVFVDETVGGAIPREFIPSIEKALRQSLRDGGPGGYPVLGQQVTLLDGAFHQKDSS GLAFELATREAFRIGFERAAPILLEPVMRVVVTTPEDYLGGIIGDLQSRRGRIVATEPIPRGQEVIAEVPLARLFNYVSA LRSLSQGRAVHAMAFSRYAPAPIGVAEKLIATA
Sequences:
>Translated_673_residues MAHVDAGKTTLTERILLDTGKIHQAGDVHTGNTETDSHALEKKHGITISAAAISCEWRDAFITIIDTPGHVDFQIEVERS LRVLDGAIAVFSAVSGVEPQSETVWRQADRLGVPRLCFVNKMDQVGADLQRTVEMIADRLGATPLVLQLPLRGEDGFAGV VDLVAMKALYWDGAQPQPSAGAIPEELRSAAERQRQRLLETLADQDAAIMAAYVGGETISAADLKAAIRRACLAGRLTPV LCGSAYRNVGVHPLLDAIVDYAPGPEDRPAVAGLDPRSGAAEHRLPRADQPFAALVSKVQASRFGTLAFVRVYAGRVTAG TSVTNATSDRTERIGRLLRMQADAQIEIDEARAGDVVAVVGLKSVVAGDTLSDPAHPIVLDGFVIPEPVIEAVVEPRLGQ DQERLGQALALMARSDPSLRVVVDADSGQTLLRGMGELHLQIAVERLKEDYNVDAVIGAPEVAYRAAASRPSEVDHTLRK QSGGPGQMARVRLAFAPLEEGGEGLVFVDETVGGAIPREFIPSIEKALRQSLRDGGPGGYPVLGQQVTLLDGAFHQKDSS GLAFELATREAFRIGFERAAPILLEPVMRVVVTTPEDYLGGIIGDLQSRRGRIVATEPIPRGQEVIAEVPLARLFNYVSA LRSLSQGRAVHAMAFSRYAPAPIGVAEKLIATA >Mature_672_residues AHVDAGKTTLTERILLDTGKIHQAGDVHTGNTETDSHALEKKHGITISAAAISCEWRDAFITIIDTPGHVDFQIEVERSL RVLDGAIAVFSAVSGVEPQSETVWRQADRLGVPRLCFVNKMDQVGADLQRTVEMIADRLGATPLVLQLPLRGEDGFAGVV DLVAMKALYWDGAQPQPSAGAIPEELRSAAERQRQRLLETLADQDAAIMAAYVGGETISAADLKAAIRRACLAGRLTPVL CGSAYRNVGVHPLLDAIVDYAPGPEDRPAVAGLDPRSGAAEHRLPRADQPFAALVSKVQASRFGTLAFVRVYAGRVTAGT SVTNATSDRTERIGRLLRMQADAQIEIDEARAGDVVAVVGLKSVVAGDTLSDPAHPIVLDGFVIPEPVIEAVVEPRLGQD QERLGQALALMARSDPSLRVVVDADSGQTLLRGMGELHLQIAVERLKEDYNVDAVIGAPEVAYRAAASRPSEVDHTLRKQ SGGPGQMARVRLAFAPLEEGGEGLVFVDETVGGAIPREFIPSIEKALRQSLRDGGPGGYPVLGQQVTLLDGAFHQKDSSG LAFELATREAFRIGFERAAPILLEPVMRVVVTTPEDYLGGIIGDLQSRRGRIVATEPIPRGQEVIAEVPLARLFNYVSAL RSLSQGRAVHAMAFSRYAPAPIGVAEKLIATA
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=681, Percent_Identity=38.0323054331865, Blast_Score=483, Evalue=1e-136, Organism=Homo sapiens, GI19923640, Length=698, Percent_Identity=36.5329512893983, Blast_Score=394, Evalue=1e-109, Organism=Homo sapiens, GI25306287, Length=697, Percent_Identity=34.4332855093257, Blast_Score=353, Evalue=4e-97, Organism=Homo sapiens, GI25306283, Length=433, Percent_Identity=40.1847575057737, Blast_Score=277, Evalue=3e-74, Organism=Homo sapiens, GI94966754, Length=138, Percent_Identity=37.6811594202899, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI4503483, Length=141, Percent_Identity=40.4255319148936, Blast_Score=83, Evalue=8e-16, Organism=Homo sapiens, GI157426893, Length=141, Percent_Identity=36.1702127659575, Blast_Score=80, Evalue=7e-15, Organism=Homo sapiens, GI310132016, Length=112, Percent_Identity=39.2857142857143, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI310110807, Length=112, Percent_Identity=39.2857142857143, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI310123363, Length=112, Percent_Identity=39.2857142857143, Blast_Score=74, Evalue=4e-13, Organism=Escherichia coli, GI1789738, Length=683, Percent_Identity=46.4128843338214, Blast_Score=611, Evalue=1e-176, Organism=Escherichia coli, GI1790835, Length=489, Percent_Identity=26.3803680981595, Blast_Score=140, Evalue=4e-34, Organism=Escherichia coli, GI48994988, Length=166, Percent_Identity=36.144578313253, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1788922, Length=146, Percent_Identity=36.3013698630137, Blast_Score=82, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17533571, Length=681, Percent_Identity=36.1233480176211, Blast_Score=433, Evalue=1e-121, Organism=Caenorhabditis elegans, GI17556745, Length=697, Percent_Identity=27.116212338594, Blast_Score=259, Evalue=4e-69, Organism=Caenorhabditis elegans, GI17506493, Length=177, Percent_Identity=36.1581920903955, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17557151, Length=145, Percent_Identity=33.7931034482759, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71988819, Length=132, Percent_Identity=31.8181818181818, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71988811, Length=132, Percent_Identity=31.8181818181818, Blast_Score=68, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323098, Length=679, Percent_Identity=38.5861561119293, Blast_Score=493, Evalue=1e-140, Organism=Saccharomyces cerevisiae, GI6322359, Length=771, Percent_Identity=29.3125810635538, Blast_Score=306, Evalue=6e-84, Organism=Saccharomyces cerevisiae, GI6324707, Length=438, Percent_Identity=25.7990867579909, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6320593, Length=438, Percent_Identity=25.7990867579909, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323320, Length=147, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6324166, Length=148, Percent_Identity=33.7837837837838, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI24582462, Length=679, Percent_Identity=38.4388807069219, Blast_Score=496, Evalue=1e-140, Organism=Drosophila melanogaster, GI221458488, Length=716, Percent_Identity=30.8659217877095, Blast_Score=319, Evalue=4e-87, Organism=Drosophila melanogaster, GI24585711, Length=156, Percent_Identity=38.4615384615385, Blast_Score=87, Evalue=5e-17, Organism=Drosophila melanogaster, GI24585713, Length=156, Percent_Identity=38.4615384615385, Blast_Score=87, Evalue=5e-17, Organism=Drosophila melanogaster, GI24585709, Length=156, Percent_Identity=38.4615384615385, Blast_Score=87, Evalue=5e-17, Organism=Drosophila melanogaster, GI78706572, Length=141, Percent_Identity=36.1702127659575, Blast_Score=76, Evalue=1e-13, Organism=Drosophila melanogaster, GI28574573, Length=208, Percent_Identity=29.3269230769231, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 71881; Mature: 71750
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHVDAGKTTLTERILLDTGKIHQAGDVHTGNTETDSHALEKKHGITISAAAISCEWRDA CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEEEECCE FITIIDTPGHVDFQIEVERSLRVLDGAIAVFSAVSGVEPQSETVWRQADRLGVPRLCFVN EEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHH KMDQVGADLQRTVEMIADRLGATPLVLQLPLRGEDGFAGVVDLVAMKALYWDGAQPQPSA CHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC GAIPEELRSAAERQRQRLLETLADQDAAIMAAYVGGETISAADLKAAIRRACLAGRLTPV CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHH LCGSAYRNVGVHPLLDAIVDYAPGPEDRPAVAGLDPRSGAAEHRLPRADQPFAALVSKVQ HHCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHH ASRFGTLAFVRVYAGRVTAGTSVTNATSDRTERIGRLLRMQADAQIEIDEARAGDVVAVV HHHCCHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEE GLKSVVAGDTLSDPAHPIVLDGFVIPEPVIEAVVEPRLGQDQERLGQALALMARSDPSLR CHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEE VVVDADSGQTLLRGMGELHLQIAVERLKEDYNVDAVIGAPEVAYRAAASRPSEVDHTLRK EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCHHHHHHHHH QSGGPGQMARVRLAFAPLEEGGEGLVFVDETVGGAIPREFIPSIEKALRQSLRDGGPGGY CCCCCCHHEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC PVLGQQVTLLDGAFHQKDSSGLAFELATREAFRIGFERAAPILLEPVMRVVVTTPEDYLG CCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHEECCCHHHHH GIIGDLQSRRGRIVATEPIPRGQEVIAEVPLARLFNYVSALRSLSQGRAVHAMAFSRYAP HHHHHHHHCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEHHHHHHCCC APIGVAEKLIATA CCCHHHHHHHHCC >Mature Secondary Structure AHVDAGKTTLTERILLDTGKIHQAGDVHTGNTETDSHALEKKHGITISAAAISCEWRDA CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEEEECCE FITIIDTPGHVDFQIEVERSLRVLDGAIAVFSAVSGVEPQSETVWRQADRLGVPRLCFVN EEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHH KMDQVGADLQRTVEMIADRLGATPLVLQLPLRGEDGFAGVVDLVAMKALYWDGAQPQPSA CHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC GAIPEELRSAAERQRQRLLETLADQDAAIMAAYVGGETISAADLKAAIRRACLAGRLTPV CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHH LCGSAYRNVGVHPLLDAIVDYAPGPEDRPAVAGLDPRSGAAEHRLPRADQPFAALVSKVQ HHCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHH ASRFGTLAFVRVYAGRVTAGTSVTNATSDRTERIGRLLRMQADAQIEIDEARAGDVVAVV HHHCCHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEE GLKSVVAGDTLSDPAHPIVLDGFVIPEPVIEAVVEPRLGQDQERLGQALALMARSDPSLR CHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEE VVVDADSGQTLLRGMGELHLQIAVERLKEDYNVDAVIGAPEVAYRAAASRPSEVDHTLRK EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCHHHHHHHHH QSGGPGQMARVRLAFAPLEEGGEGLVFVDETVGGAIPREFIPSIEKALRQSLRDGGPGGY CCCCCCHHEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC PVLGQQVTLLDGAFHQKDSSGLAFELATREAFRIGFERAAPILLEPVMRVVVTTPEDYLG CCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHEECCCHHHHH GIIGDLQSRRGRIVATEPIPRGQEVIAEVPLARLFNYVSALRSLSQGRAVHAMAFSRYAP HHHHHHHHCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEHHHHHHCCC APIGVAEKLIATA CCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA