Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340746
Identifier: 146340746
GI number: 146340746
Start: 3972077
End: 3973033
Strand: Reverse
Name: 146340746
Synonym: BRADO3801
Alternate gene names: NA
Gene position: 3973033-3972077 (Counterclockwise)
Preceding gene: 146340747
Following gene: 146340743
Centisome position: 53.28
GC content: 70.43
Gene sequence:
>957_bases GTGCGATGCGCGACTTACCAGCGCGTGAGCTCGCTCACATCAGCAACCGACATCGCGGAGATCCTGATGAAGAGGCTGTT GGCCGTTGCTGCCGTGGTTCTGGCCAGCAGTGCCGCCCAGGCGCAATACGTGATCGAATATGGCGGCAAGACCATCCGCA TCGATCCCGACCGCGGCACCGTGCAGATCCCCGGCGTCTACGACAACACCGAGCAGAAGAAGCCCAAGCGCGCCAAGCGC GATCAGGATACGGCGGCCAGGCCGCAGCCGGGCGCGGACAAGCCGGCCCAAGCGCCTGCCGAGGCGGCGGTGACGCCATC CACACCCGCGCAGGCGCCTGCTGCGTCGCCCCCTGCCGCAGTGCCGGCCGCACCGGCGCCGACCGCAGCCGTGCCGGTGA GCCCGCCACCGGCGCCCGTCGCACCTGCCCCCGTCGCACCTGCCCCAGTCCAGGCAGCCGTGCCGTCAGCAGCCGTGGCT GCGCCAGCCGCGCCCGCGCCGGCAGCCGCTCCGCTGACGCCGCCTGCCGGAGCGCCGACCGTTGCTGCTCCCGTGGCGCC TCCGCCGGCGGCGGTCCAGCCACAGCCGCGCCCGGCCCAGGCTCCGGCCACCGTGGCGACAACAGTGGCGCCGCCGCCGT CCGTGCGCGATCAGAACTCGCCGGTTGGCATCTGGCTGACAGAGGAGAAGGAGGGCAAGATCCGCATCGAGCCATGCGGC GCCAATCTCTGCGGCTACTCGATCGACGCCAAGACCAACCAGAACGGCGAGCAGATCCTGATCAACATGCGGCCGAACGA CAAAGAGAAGAAGTGGAGCGGCCGGATCTTCGACCCGAGCAGCGGCAGCACTTACGATTCGACCATCGCGCTCAAGGGCC CGGACAGCCTGCGCGTGCAGGGCTGCGCCTTTGGCGGCATGTTCTGCGGCGGCCAGACCTGGACGCGCGTGAACTGA
Upstream 100 bases:
>100_bases CTGCCCAGCGTACGGCAGACCCGCACGTTCTTCGTGATGAAGGAGGTGGTCGACAATGCGCCGCTGGATTTTTGAGCCCT CGGCGGATTGAACCGGAGGT
Downstream 100 bases:
>100_bases GCGCTGCTGCTCCAAAGCAAAAGCGCGCGGCCTTGCGACCGCGCGCCCGACATCCTGTCAGTCCAGCCTTAGCCGACGGG CGTGGCGTATTCCTCGTCGG
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MRCATYQRVSSLTSATDIAEILMKRLLAVAAVVLASSAAQAQYVIEYGGKTIRIDPDRGTVQIPGVYDNTEQKKPKRAKR DQDTAARPQPGADKPAQAPAEAAVTPSTPAQAPAASPPAAVPAAPAPTAAVPVSPPPAPVAPAPVAPAPVQAAVPSAAVA APAAPAPAAAPLTPPAGAPTVAAPVAPPPAAVQPQPRPAQAPATVATTVAPPPSVRDQNSPVGIWLTEEKEGKIRIEPCG ANLCGYSIDAKTNQNGEQILINMRPNDKEKKWSGRIFDPSSGSTYDSTIALKGPDSLRVQGCAFGGMFCGGQTWTRVN
Sequences:
>Translated_318_residues MRCATYQRVSSLTSATDIAEILMKRLLAVAAVVLASSAAQAQYVIEYGGKTIRIDPDRGTVQIPGVYDNTEQKKPKRAKR DQDTAARPQPGADKPAQAPAEAAVTPSTPAQAPAASPPAAVPAAPAPTAAVPVSPPPAPVAPAPVAPAPVQAAVPSAAVA APAAPAPAAAPLTPPAGAPTVAAPVAPPPAAVQPQPRPAQAPATVATTVAPPPSVRDQNSPVGIWLTEEKEGKIRIEPCG ANLCGYSIDAKTNQNGEQILINMRPNDKEKKWSGRIFDPSSGSTYDSTIALKGPDSLRVQGCAFGGMFCGGQTWTRVN >Mature_318_residues MRCATYQRVSSLTSATDIAEILMKRLLAVAAVVLASSAAQAQYVIEYGGKTIRIDPDRGTVQIPGVYDNTEQKKPKRAKR DQDTAARPQPGADKPAQAPAEAAVTPSTPAQAPAASPPAAVPAAPAPTAAVPVSPPPAPVAPAPVAPAPVQAAVPSAAVA APAAPAPAAAPLTPPAGAPTVAAPVAPPPAAVQPQPRPAQAPATVATTVAPPPSVRDQNSPVGIWLTEEKEGKIRIEPCG ANLCGYSIDAKTNQNGEQILINMRPNDKEKKWSGRIFDPSSGSTYDSTIALKGPDSLRVQGCAFGGMFCGGQTWTRVN
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32403; Mature: 32403
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCATYQRVSSLTSATDIAEILMKRLLAVAAVVLASSAAQAQYVIEYGGKTIRIDPDRGT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEECCEEEEECCCCCE VQIPGVYDNTEQKKPKRAKRDQDTAARPQPGADKPAQAPAEAAVTPSTPAQAPAASPPAA EEECCCCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPAAPAPTAAVPVSPPPAPVAPAPVAPAPVQAAVPSAAVAAPAAPAPAAAPLTPPAGAPT CCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCC VAAPVAPPPAAVQPQPRPAQAPATVATTVAPPPSVRDQNSPVGIWLTEEKEGKIRIEPCG EECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECC ANLCGYSIDAKTNQNGEQILINMRPNDKEKKWSGRIFDPSSGSTYDSTIALKGPDSLRVQ CCCCCEEECCCCCCCCCEEEEECCCCCCCHHCCCCEECCCCCCCCCCEEEEECCCCEEEE GCAFGGMFCGGQTWTRVN EEEECCEEECCCEEEECC >Mature Secondary Structure MRCATYQRVSSLTSATDIAEILMKRLLAVAAVVLASSAAQAQYVIEYGGKTIRIDPDRGT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEECCEEEEECCCCCE VQIPGVYDNTEQKKPKRAKRDQDTAARPQPGADKPAQAPAEAAVTPSTPAQAPAASPPAA EEECCCCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPAAPAPTAAVPVSPPPAPVAPAPVAPAPVQAAVPSAAVAAPAAPAPAAAPLTPPAGAPT CCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCC VAAPVAPPPAAVQPQPRPAQAPATVATTVAPPPSVRDQNSPVGIWLTEEKEGKIRIEPCG EECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECC ANLCGYSIDAKTNQNGEQILINMRPNDKEKKWSGRIFDPSSGSTYDSTIALKGPDSLRVQ CCCCCEEECCCCCCCCCEEEEECCCCCCCHHCCCCEECCCCCCCCCCEEEEECCCCEEEE GCAFGGMFCGGQTWTRVN EEEECCEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA