Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340720
Identifier: 146340720
GI number: 146340720
Start: 3942445
End: 3943845
Strand: Reverse
Name: 146340720
Synonym: BRADO3773
Alternate gene names: NA
Gene position: 3943845-3942445 (Counterclockwise)
Preceding gene: 146340721
Following gene: 146340717
Centisome position: 52.89
GC content: 64.17
Gene sequence:
>1401_bases ATGGAGACGATCATTCTGGTCCCCGGCATCACGGGCTCGTGCCTCAGCATCGGTGAGACCCAGGTATGGCCGCCAACGAT CGACGAAATCGTCTGGGAGGGCTATCACCGGATCGGCGAGCTGCGCGATCCGAGCGCGACGGCGACCGGGATTTGGGCCG AGCTTCCGGTGTTCGACGGCTACACTTATCCGGTCTATCGCCCGATCATGACCAAGCTGGATGAGATCGCAGCGCGGCTC TCCCCGGCGGCCAGCCGCATCGACTTCTACTATGACTGGCGTGTGGATCTGTGGCAGGCGAACGCGCCGTTCGTCGCCTC GTCCGAGATGCTGGCCCGGCGTATCGCGCAGGCCGTTCACGATGGGGCGACGACGATCACGCTGGTCTGCCATTCCATGG GCAATCTGGTGGCTCGGCTGATGCTCGAAAGCCGGAGATACCGGAACGAGCCGTGGTTCGGAAAGATCACGCGTCTGATC TGCCTCTGCGGACCGCATCTGGGCGCTGCGACCGCTCTGGGACAGGCGCTGGGTTGCGAAGCCGGCTCGCTCGGCATGAG CCGAGACGATTTGCGAACCGTCGCCAACGATCCGAGATACCCGGCCTGCTTCCAGTGCTTTCCGATGCCCGAGACGGATG TCCTGCTCGACACCAGCATCACGCCTCCGGAGCAGGACGTGTACGACCCTGCCGTGGCCGGCAAATACGAGCTGACGGCC TCGAGTGCGCTGGCGGCAGCGACCTCATGGCAGCAACTCGACATCACGCAGCGGCCGGCCCATGTCACATACTATCTCAT CGCCGGCACGGGCCTCAGCACCTCCAATGCTTATCTCTATCGTGGCACCGAGTTTGTCGAGAACATCACAGTCGACGGCG ACGGTACGGTGCCTGTCTACAGCGCCCTTGCCGGCAGCTATTCCGGAAAATATTCGATTCCGGGCAGCCATGTCGGAATT CTCGGCACAGTGCAGCTGTCGGATGCGCTGGACGAGATCTTCGGCCTGTCGCGCATGCGGGCGTTCCTGATGGCCGAGCC GGGCATCACGATCAATCTTCACAAGCACAGCTTTGCACCCGGCGAGTCCATGCAGATGCTGATCATCCCGGACACGCCAA CCACCACCATCAAGGGGCAGCTGACCGTCAGCGCGGCGCCCCGTCCGGGCGCGCGAAGCGGTGCCGCCAAGGCGGCTCTC GTTGCCTATGGCGCGGCGCTGCCGCTGGACTATCAGGGACCTGAGATCACGCACATCCCGGCGCGTTGGACCGCCCCGCG CCAGCCCGGAGCTTATGTCATGCGGTTCGAGGGCGACACGCACAAGACGAGCCCATCATCGAGCGCCGTGTTCTTCGTCA ATGCCCAGCCCGGACTTGCGCCGCTGCGCGGGACACGTTGA
Upstream 100 bases:
>100_bases AGATTGTTTTTCTCGTTGAATACACATAGCCTCTCTCTGGCAGTGAGGGACCGGCCGTCGACAGGACTACGCGGTCGGTC GAAGCACCAGGGAGAGATCG
Downstream 100 bases:
>100_bases GAGGCGCGGCCGCGCATTTGCCTCAGTCGTCTGCTGAGCTTCCAAGTCGACTGAGGGCTTCTCACGAAGCGGAGCATGCG TCATGCAAAACCGGCAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues METIILVPGITGSCLSIGETQVWPPTIDEIVWEGYHRIGELRDPSATATGIWAELPVFDGYTYPVYRPIMTKLDEIAARL SPAASRIDFYYDWRVDLWQANAPFVASSEMLARRIAQAVHDGATTITLVCHSMGNLVARLMLESRRYRNEPWFGKITRLI CLCGPHLGAATALGQALGCEAGSLGMSRDDLRTVANDPRYPACFQCFPMPETDVLLDTSITPPEQDVYDPAVAGKYELTA SSALAAATSWQQLDITQRPAHVTYYLIAGTGLSTSNAYLYRGTEFVENITVDGDGTVPVYSALAGSYSGKYSIPGSHVGI LGTVQLSDALDEIFGLSRMRAFLMAEPGITINLHKHSFAPGESMQMLIIPDTPTTTIKGQLTVSAAPRPGARSGAAKAAL VAYGAALPLDYQGPEITHIPARWTAPRQPGAYVMRFEGDTHKTSPSSSAVFFVNAQPGLAPLRGTR
Sequences:
>Translated_466_residues METIILVPGITGSCLSIGETQVWPPTIDEIVWEGYHRIGELRDPSATATGIWAELPVFDGYTYPVYRPIMTKLDEIAARL SPAASRIDFYYDWRVDLWQANAPFVASSEMLARRIAQAVHDGATTITLVCHSMGNLVARLMLESRRYRNEPWFGKITRLI CLCGPHLGAATALGQALGCEAGSLGMSRDDLRTVANDPRYPACFQCFPMPETDVLLDTSITPPEQDVYDPAVAGKYELTA SSALAAATSWQQLDITQRPAHVTYYLIAGTGLSTSNAYLYRGTEFVENITVDGDGTVPVYSALAGSYSGKYSIPGSHVGI LGTVQLSDALDEIFGLSRMRAFLMAEPGITINLHKHSFAPGESMQMLIIPDTPTTTIKGQLTVSAAPRPGARSGAAKAAL VAYGAALPLDYQGPEITHIPARWTAPRQPGAYVMRFEGDTHKTSPSSSAVFFVNAQPGLAPLRGTR >Mature_466_residues METIILVPGITGSCLSIGETQVWPPTIDEIVWEGYHRIGELRDPSATATGIWAELPVFDGYTYPVYRPIMTKLDEIAARL SPAASRIDFYYDWRVDLWQANAPFVASSEMLARRIAQAVHDGATTITLVCHSMGNLVARLMLESRRYRNEPWFGKITRLI CLCGPHLGAATALGQALGCEAGSLGMSRDDLRTVANDPRYPACFQCFPMPETDVLLDTSITPPEQDVYDPAVAGKYELTA SSALAAATSWQQLDITQRPAHVTYYLIAGTGLSTSNAYLYRGTEFVENITVDGDGTVPVYSALAGSYSGKYSIPGSHVGI LGTVQLSDALDEIFGLSRMRAFLMAEPGITINLHKHSFAPGESMQMLIIPDTPTTTIKGQLTVSAAPRPGARSGAAKAAL VAYGAALPLDYQGPEITHIPARWTAPRQPGAYVMRFEGDTHKTSPSSSAVFFVNAQPGLAPLRGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50378; Mature: 50378
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METIILVPGITGSCLSIGETQVWPPTIDEIVWEGYHRIGELRDPSATATGIWAELPVFDG CCEEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCC YTYPVYRPIMTKLDEIAARLSPAASRIDFYYDWRVDLWQANAPFVASSEMLARRIAQAVH CCCHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEEEEEEECCCCEEECHHHHHHHHHHHHH DGATTITLVCHSMGNLVARLMLESRRYRNEPWFGKITRLICLCGPHLGAATALGQALGCE CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCC AGSLGMSRDDLRTVANDPRYPACFQCFPMPETDVLLDTSITPPEQDVYDPAVAGKYELTA CCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEH SSALAAATSWQQLDITQRPAHVTYYLIAGTGLSTSNAYLYRGTEFVENITVDGDGTVPVY HHHHHHHCCCCEECCCCCCCEEEEEEEEECCCCCCCEEEEECCHHHHEEEECCCCCCHHH SALAGSYSGKYSIPGSHVGILGTVQLSDALDEIFGLSRMRAFLMAEPGITINLHKHSFAP HHHHCCCCCEECCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCC GESMQMLIIPDTPTTTIKGQLTVSAAPRPGARSGAAKAALVAYGAALPLDYQGPEITHIP CCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCHHEEHHEECCCCCCCCCCCEEEECC ARWTAPRQPGAYVMRFEGDTHKTSPSSSAVFFVNAQPGLAPLRGTR CCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure METIILVPGITGSCLSIGETQVWPPTIDEIVWEGYHRIGELRDPSATATGIWAELPVFDG CCEEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCC YTYPVYRPIMTKLDEIAARLSPAASRIDFYYDWRVDLWQANAPFVASSEMLARRIAQAVH CCCHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEEEEEEECCCCEEECHHHHHHHHHHHHH DGATTITLVCHSMGNLVARLMLESRRYRNEPWFGKITRLICLCGPHLGAATALGQALGCE CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCC AGSLGMSRDDLRTVANDPRYPACFQCFPMPETDVLLDTSITPPEQDVYDPAVAGKYELTA CCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEH SSALAAATSWQQLDITQRPAHVTYYLIAGTGLSTSNAYLYRGTEFVENITVDGDGTVPVY HHHHHHHCCCCEECCCCCCCEEEEEEEEECCCCCCCEEEEECCHHHHEEEECCCCCCHHH SALAGSYSGKYSIPGSHVGILGTVQLSDALDEIFGLSRMRAFLMAEPGITINLHKHSFAP HHHHCCCCCEECCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCC GESMQMLIIPDTPTTTIKGQLTVSAAPRPGARSGAAKAALVAYGAALPLDYQGPEITHIP CCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCHHEEHHEECCCCCCCCCCCEEEECC ARWTAPRQPGAYVMRFEGDTHKTSPSSSAVFFVNAQPGLAPLRGTR CCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA