Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is recG [H]
Identifier: 146340717
GI number: 146340717
Start: 3936133
End: 3938235
Strand: Reverse
Name: recG [H]
Synonym: BRADO3769
Alternate gene names: 146340717
Gene position: 3938235-3936133 (Counterclockwise)
Preceding gene: 146340720
Following gene: 146340714
Centisome position: 52.82
GC content: 68.24
Gene sequence:
>2103_bases ATGCGCCCTGCCATCCTCAACCCGCTGTTTGCGCCGGTCACGACCCTCTCGGGTGTCGGGCCGAAGCAGGACAAGCTGCT GCGCTACCTGCTGAGCTGCAGCGAGACGCCGCGGCTCGTCGACCTGCTGCTGCATCTGCCGGCCAGCGTCATCGACCGCC GGAACCGGCCCAAGGTCCGCGACGTCGAGGTCGGCACCGTGGTGACCCTGGAGGTGACGGTCGATCGCCATCGTCCGTCG CGTAACGCGCGCGCCCCTTATCTGGTTTACGCCAGCGACGACACCGGCGACGTCGTGCTGACGTTTTTTCGGCCCAAGGG CGACTACATCGAGAAGATGCTGCCGGTCGGCGCCAAGCGCTACGTCTCCGGCACCGTGCAGATGTACGACGGTATCCCGC AGATCGTGCACCCCGACCGCATCCTCGATGAAGCCGGCTTCGCCAAACTGTCAGGAATCGACCCGGTCTATCCGCTCACC GAAGGCCTCGCGCTCGGCTCGCTGCGGCGGGCGATCGCGGCGGCGCTGACCAAGCTGCCGGAGCTGCCGGAATGGATCAG CCCGGAGGTGCTGAGCCGCTGCAATTTCCCGTCGCTGAGGGAGGCGCTGACGCGGGTGCACGTCCCGCAAGAGCTGACGG ATATACTGCCCGAAAATCCGTTCTGGTCGCGCCTCGCCTTTGACGAGCTGCTTGCCGGCCAATTGGCCCTGGCGCTGGTG CGCGCGCAATTGCGCCGTCCCGCGGGCAACCGCCACGCCGGCGACGGCCGCCTGCGCCGCAGGATCATCGATGCCCTTCC CTATGCGCTGACCAACTCGCAGGCCCAGGCGATCGAGGCGATCGCCGCCGATCTGGAAAAGCCCGTGCGCATGCTCCGGC TGCTGCAGGGCGACGTCGGTTCGGGCAAGACGGTGGTCGCGCTGCTCGCCGCGGCGGCCGTGGCCGAGGCCGGCAAGCAG GCCGCGCTGATGGCGCCGACCGAAATCCTGGCGCGACAGCATGCCAAGACCATCGCGCCGCTCGCCGAGCGCGCGGGCAT GAGCGTCGCCATTCTCACCGGCCGCGAGAAAGTTAAGGAGCGCCGCGACATCCTTGCCCGCCTGGAGGCCGGCGAGATCG ACGTCCTGATTGGCACCCATGCGCTGATCCAAGACGACGTCATGTTCAAATCGCTGGCGCTCGCCATCGTCGACGAGCAG CATCGCTTCGGGGTGCGCGAGAGGCTGGCGCTGACCTCCAAGGGCGAGGCCGTCGACGTGCTCGTGCTGTCCGCGACGCC GATCCCGCGCACGCTGGTCCTCACCTATTTCGGCGACATGGACATTTCCGAGCTACGCGAGAAGCCGGCCGGCCGGCAGC CGATCGACACCCGCGCGGTGGCTGACACCCGGCGCACCGAGGTCATCGACGCCGTCGGCCGCGCGCTCGACGCCGGCAAG CTGGTGTACTGGATCTGCCCGCTGGTCGAGGAGTCCGAGGCCGAAGGCATCGATCATCTCACCAACGCCACCGACCGCTA CGAAAGCCTGCGCGAGCGCTTCGGCGAGCGTGTCGGCCTCGTCCACGGCAAGATGAAGGGCAGCGAGAAGGACGACGTCA TGAACCGCTTCGCGGCGCATGAACTGCGGCTGCTCGTTGCCACGACGGTCGTCGAGGTCGGAGTCGACGTGCCCGCCGCG AGCATCATGGTGATCGAGAATGCCGAGCGCTTCGGCCTCGCCCAGTTGCATCAGCTGCGCGGCCGCATCGGCCGCGGCTC GGAAGCCTCGACCTGCATCCTGCTCTATCACGAGCCGCTCGGCCAGATGTCGAAGGCGCGGCTCGCCGTCATCCGCGAGA CCACCGACGGCTTCCGCATCGCCGAGGAGGATCTCAAGCTGCGCGGCGAAGGCGACGTGCTGGGCATCCGCCAGAGCGGC CTGCCCGGCTACCGCATCGCCCGGCCCGAGGTGCATGCGCAGCTGATCACGCAGGCCCGCGACGAGGCGTTACGGATCCT GAAGGACGATCCCAAGCTGAAGGGACCGCGCAGCGATGCGCTGCGCTGTCTGCTGTATCTCTACGAACGCGACGAGGCGA TCCCGCTGCTCACGGCGGGGTGA
Upstream 100 bases:
>100_bases GAACCGGCATGTCGGGCCGCCTCAAACCGGGGAAAAAAGAGGTGGATGTCTCGACGATCGCGGCTATTCCGGCCCGCAAA GCGAATTAAGTGTTCGGTCC
Downstream 100 bases:
>100_bases TTGAGGCGGTGCATCAACAAACTCCGCTGTCGTCCCGGCCTCCGAGCCCGGACCCATACCCCCAGGGAGCAGTTTGAGGC AGGCTGGCGATTGGCTCTTT
Product: DNA helicase, ATP-dependent resolution of Holliday junctions, branch migration
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 700; Mature: 700
Protein sequence:
>700_residues MRPAILNPLFAPVTTLSGVGPKQDKLLRYLLSCSETPRLVDLLLHLPASVIDRRNRPKVRDVEVGTVVTLEVTVDRHRPS RNARAPYLVYASDDTGDVVLTFFRPKGDYIEKMLPVGAKRYVSGTVQMYDGIPQIVHPDRILDEAGFAKLSGIDPVYPLT EGLALGSLRRAIAAALTKLPELPEWISPEVLSRCNFPSLREALTRVHVPQELTDILPENPFWSRLAFDELLAGQLALALV RAQLRRPAGNRHAGDGRLRRRIIDALPYALTNSQAQAIEAIAADLEKPVRMLRLLQGDVGSGKTVVALLAAAAVAEAGKQ AALMAPTEILARQHAKTIAPLAERAGMSVAILTGREKVKERRDILARLEAGEIDVLIGTHALIQDDVMFKSLALAIVDEQ HRFGVRERLALTSKGEAVDVLVLSATPIPRTLVLTYFGDMDISELREKPAGRQPIDTRAVADTRRTEVIDAVGRALDAGK LVYWICPLVEESEAEGIDHLTNATDRYESLRERFGERVGLVHGKMKGSEKDDVMNRFAAHELRLLVATTVVEVGVDVPAA SIMVIENAERFGLAQLHQLRGRIGRGSEASTCILLYHEPLGQMSKARLAVIRETTDGFRIAEEDLKLRGEGDVLGIRQSG LPGYRIARPEVHAQLITQARDEALRILKDDPKLKGPRSDALRCLLYLYERDEAIPLLTAG
Sequences:
>Translated_700_residues MRPAILNPLFAPVTTLSGVGPKQDKLLRYLLSCSETPRLVDLLLHLPASVIDRRNRPKVRDVEVGTVVTLEVTVDRHRPS RNARAPYLVYASDDTGDVVLTFFRPKGDYIEKMLPVGAKRYVSGTVQMYDGIPQIVHPDRILDEAGFAKLSGIDPVYPLT EGLALGSLRRAIAAALTKLPELPEWISPEVLSRCNFPSLREALTRVHVPQELTDILPENPFWSRLAFDELLAGQLALALV RAQLRRPAGNRHAGDGRLRRRIIDALPYALTNSQAQAIEAIAADLEKPVRMLRLLQGDVGSGKTVVALLAAAAVAEAGKQ AALMAPTEILARQHAKTIAPLAERAGMSVAILTGREKVKERRDILARLEAGEIDVLIGTHALIQDDVMFKSLALAIVDEQ HRFGVRERLALTSKGEAVDVLVLSATPIPRTLVLTYFGDMDISELREKPAGRQPIDTRAVADTRRTEVIDAVGRALDAGK LVYWICPLVEESEAEGIDHLTNATDRYESLRERFGERVGLVHGKMKGSEKDDVMNRFAAHELRLLVATTVVEVGVDVPAA SIMVIENAERFGLAQLHQLRGRIGRGSEASTCILLYHEPLGQMSKARLAVIRETTDGFRIAEEDLKLRGEGDVLGIRQSG LPGYRIARPEVHAQLITQARDEALRILKDDPKLKGPRSDALRCLLYLYERDEAIPLLTAG >Mature_700_residues MRPAILNPLFAPVTTLSGVGPKQDKLLRYLLSCSETPRLVDLLLHLPASVIDRRNRPKVRDVEVGTVVTLEVTVDRHRPS RNARAPYLVYASDDTGDVVLTFFRPKGDYIEKMLPVGAKRYVSGTVQMYDGIPQIVHPDRILDEAGFAKLSGIDPVYPLT EGLALGSLRRAIAAALTKLPELPEWISPEVLSRCNFPSLREALTRVHVPQELTDILPENPFWSRLAFDELLAGQLALALV RAQLRRPAGNRHAGDGRLRRRIIDALPYALTNSQAQAIEAIAADLEKPVRMLRLLQGDVGSGKTVVALLAAAAVAEAGKQ AALMAPTEILARQHAKTIAPLAERAGMSVAILTGREKVKERRDILARLEAGEIDVLIGTHALIQDDVMFKSLALAIVDEQ HRFGVRERLALTSKGEAVDVLVLSATPIPRTLVLTYFGDMDISELREKPAGRQPIDTRAVADTRRTEVIDAVGRALDAGK LVYWICPLVEESEAEGIDHLTNATDRYESLRERFGERVGLVHGKMKGSEKDDVMNRFAAHELRLLVATTVVEVGVDVPAA SIMVIENAERFGLAQLHQLRGRIGRGSEASTCILLYHEPLGQMSKARLAVIRETTDGFRIAEEDLKLRGEGDVLGIRQSG LPGYRIARPEVHAQLITQARDEALRILKDDPKLKGPRSDALRCLLYLYERDEAIPLLTAG
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=651, Percent_Identity=41.0138248847926, Blast_Score=419, Evalue=1e-118, Organism=Escherichia coli, GI1787357, Length=385, Percent_Identity=40, Blast_Score=251, Evalue=8e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 77023; Mature: 77023
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPAILNPLFAPVTTLSGVGPKQDKLLRYLLSCSETPRLVDLLLHLPASVIDRRNRPKVR CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCHHHHCCCCCCCCE DVEVGTVVTLEVTVDRHRPSRNARAPYLVYASDDTGDVVLTFFRPKGDYIEKMLPVGAKR EEECCEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHCCCHHH YVSGTVQMYDGIPQIVHPDRILDEAGFAKLSGIDPVYPLTEGLALGSLRRAIAAALTKLP HHHHHHHHHCCCCCCCCCHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC ELPEWISPEVLSRCNFPSLREALTRVHVPQELTDILPENPFWSRLAFDELLAGQLALALV CCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH RAQLRRPAGNRHAGDGRLRRRIIDALPYALTNSQAQAIEAIAADLEKPVRMLRLLQGDVG HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC SGKTVVALLAAAAVAEAGKQAALMAPTEILARQHAKTIAPLAERAGMSVAILTGREKVKE CCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHH RRDILARLEAGEIDVLIGTHALIQDDVMFKSLALAIVDEQHRFGVRERLALTSKGEAVDV HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCCCEEEE LVLSATPIPRTLVLTYFGDMDISELREKPAGRQPIDTRAVADTRRTEVIDAVGRALDAGK EEEECCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC LVYWICPLVEESEAEGIDHLTNATDRYESLRERFGERVGLVHGKMKGSEKDDVMNRFAAH EEEEEECHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH ELRLLVATTVVEVGVDVPAASIMVIENAERFGLAQLHQLRGRIGRGSEASTCILLYHEPL HHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC GQMSKARLAVIRETTDGFRIAEEDLKLRGEGDVLGIRQSGLPGYRIARPEVHAQLITQAR CHHHHHHEEHEEECCCCCEEEHHHHEECCCCCEEEEECCCCCCCEECCHHHHHHHHHHHH DEALRILKDDPKLKGPRSDALRCLLYLYERDEAIPLLTAG HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECC >Mature Secondary Structure MRPAILNPLFAPVTTLSGVGPKQDKLLRYLLSCSETPRLVDLLLHLPASVIDRRNRPKVR CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCHHHHCCCCCCCCE DVEVGTVVTLEVTVDRHRPSRNARAPYLVYASDDTGDVVLTFFRPKGDYIEKMLPVGAKR EEECCEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHCCCHHH YVSGTVQMYDGIPQIVHPDRILDEAGFAKLSGIDPVYPLTEGLALGSLRRAIAAALTKLP HHHHHHHHHCCCCCCCCCHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC ELPEWISPEVLSRCNFPSLREALTRVHVPQELTDILPENPFWSRLAFDELLAGQLALALV CCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH RAQLRRPAGNRHAGDGRLRRRIIDALPYALTNSQAQAIEAIAADLEKPVRMLRLLQGDVG HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC SGKTVVALLAAAAVAEAGKQAALMAPTEILARQHAKTIAPLAERAGMSVAILTGREKVKE CCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHH RRDILARLEAGEIDVLIGTHALIQDDVMFKSLALAIVDEQHRFGVRERLALTSKGEAVDV HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCCCEEEE LVLSATPIPRTLVLTYFGDMDISELREKPAGRQPIDTRAVADTRRTEVIDAVGRALDAGK EEEECCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC LVYWICPLVEESEAEGIDHLTNATDRYESLRERFGERVGLVHGKMKGSEKDDVMNRFAAH EEEEEECHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH ELRLLVATTVVEVGVDVPAASIMVIENAERFGLAQLHQLRGRIGRGSEASTCILLYHEPL HHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC GQMSKARLAVIRETTDGFRIAEEDLKLRGEGDVLGIRQSGLPGYRIARPEVHAQLITQAR CHHHHHHEEHEEECCCCCEEEHHHHEECCCCCEEEEECCCCCCCEECCHHHHHHHHHHHH DEALRILKDDPKLKGPRSDALRCLLYLYERDEAIPLLTAG HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]