Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340704
Identifier: 146340704
GI number: 146340704
Start: 3921925
End: 3922497
Strand: Reverse
Name: 146340704
Synonym: BRADO3755
Alternate gene names: NA
Gene position: 3922497-3921925 (Counterclockwise)
Preceding gene: 146340706
Following gene: 146340703
Centisome position: 52.6
GC content: 70.51
Gene sequence:
>573_bases ATGGGTCGACGCGTGCTCCAGTCCAAGTTTACGGTTTCGCGCCTTGTCGCGTCTGTCGGTCTTGCGGTCCTGGTTGCCGC CCCCGGCGCCTTCGCCCAGAGCGGCAACGACCATCCCCAGGACCAAAAGCCGCAGGCGTCCAGCCCGGCCGACCTCAAGG AAAATCAGCGCAAGGCCGACGAGTTCACCGAGGCGGCGCAGGCGCTGAGCGGCGGGCCCGCCGGCAATCCGGAATGCGTC TGGCTCGGCCGCCGCGTCGTGCAGTTGATGTACCGCGACGACCTCGATACCGCGTTCCGCCATCTCGACCTTTATGACCG GTTCGGCTGCCCCGGCGGCCACATCCAGGCGTCGTTCCGCTGCCTTACCCGATTCGTCGGCCAGATCGACGACAAGGTGC CGAACTCGCTGAACAACCACGTCCACGCCTGCTGGATCAATCCGGACGCCAAGCCGCAGGCCGCCGCCGCGCCGGCGGCC GCGACGCCTCCGGCTCCCGCGGGCTCCGCGCCGCAGGCCGCCCAGCCGGCCGCGCCGCAGGCCTCGCCCTCGCCGCAGCC GGCGAAGCAGTAA
Upstream 100 bases:
>100_bases GGGGTCGGAATCAACCTCCCGCCGCAATCGGGGCCGATTTGATCGGCATCAACACTGCGTCCCCCAGGGGACGGCATGAA GGCAACATTTCGGGGAATTT
Downstream 100 bases:
>100_bases CAAGATTGCCCTGCCCGCCCGCTGTGCCGGCAGGGCAGATCCAGGCGGAGGGCAGCGCCGCCGCAGTTGTTTAATTGCGC TGCAGCGTTATCGTGTCGCA
Product: putative cyclic beta-1-3, beta-1-6-glucan synthesis regulatory protein, ndvD-like
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MGRRVLQSKFTVSRLVASVGLAVLVAAPGAFAQSGNDHPQDQKPQASSPADLKENQRKADEFTEAAQALSGGPAGNPECV WLGRRVVQLMYRDDLDTAFRHLDLYDRFGCPGGHIQASFRCLTRFVGQIDDKVPNSLNNHVHACWINPDAKPQAAAAPAA ATPPAPAGSAPQAAQPAAPQASPSPQPAKQ
Sequences:
>Translated_190_residues MGRRVLQSKFTVSRLVASVGLAVLVAAPGAFAQSGNDHPQDQKPQASSPADLKENQRKADEFTEAAQALSGGPAGNPECV WLGRRVVQLMYRDDLDTAFRHLDLYDRFGCPGGHIQASFRCLTRFVGQIDDKVPNSLNNHVHACWINPDAKPQAAAAPAA ATPPAPAGSAPQAAQPAAPQASPSPQPAKQ >Mature_189_residues GRRVLQSKFTVSRLVASVGLAVLVAAPGAFAQSGNDHPQDQKPQASSPADLKENQRKADEFTEAAQALSGGPAGNPECVW LGRRVVQLMYRDDLDTAFRHLDLYDRFGCPGGHIQASFRCLTRFVGQIDDKVPNSLNNHVHACWINPDAKPQAAAAPAAA TPPAPAGSAPQAAQPAAPQASPSPQPAKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20050; Mature: 19918
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRVLQSKFTVSRLVASVGLAVLVAAPGAFAQSGNDHPQDQKPQASSPADLKENQRKAD CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH EFTEAAQALSGGPAGNPECVWLGRRVVQLMYRDDLDTAFRHLDLYDRFGCPGGHIQASFR HHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHH CLTRFVGQIDDKVPNSLNNHVHACWINPDAKPQAAAAPAAATPPAPAGSAPQAAQPAAPQ HHHHHHHHHHHHCCHHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC ASPSPQPAKQ CCCCCCCCCC >Mature Secondary Structure GRRVLQSKFTVSRLVASVGLAVLVAAPGAFAQSGNDHPQDQKPQASSPADLKENQRKAD CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH EFTEAAQALSGGPAGNPECVWLGRRVVQLMYRDDLDTAFRHLDLYDRFGCPGGHIQASFR HHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHH CLTRFVGQIDDKVPNSLNNHVHACWINPDAKPQAAAAPAAATPPAPAGSAPQAAQPAAPQ HHHHHHHHHHHHCCHHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC ASPSPQPAKQ CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA