| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340414
Identifier: 146340414
GI number: 146340414
Start: 3632362
End: 3633099
Strand: Direct
Name: 146340414
Synonym: BRADO3450
Alternate gene names: NA
Gene position: 3632362-3633099 (Clockwise)
Preceding gene: 146340413
Following gene: 146340415
Centisome position: 48.71
GC content: 68.56
Gene sequence:
>738_bases GTGGTGAAGTTCAGAACGTGTCTCGTCGCGACGCTGCTGATCGCTGCGTCGACCTCGTTGGCGACAGCTGCTCCCGGTCT TGTTCGCAGTTCGGCCACGATGCGCGCGGGTCCGGGCCCGGGCTTTCCCATGGTCGAGCGGATTCCGGCGGGTGCCCGTG TCACCATTCACGGCTGCATTCAAGGCGGTGCATGGTGCGATGTGAGCTTCGCCGGCGAGCGGGGCTGGATCGCGGCGAGA GCGCTCGCCTATCTCTATCGCGAGCAATACGTCTATCTGCCCGAATATGTCGAATACGTGCCGGTCGCGCCGTTCGTGCT GACCACCTATTGGAGCAGCTTCTATTTCGGTCGTCCGTGGTTTCACCGCCACGCCTATTGGAATCGCTATTGGCGCCAGC ATCCCGTCATGGCCCAGAACCCGCCAGCGCCGGCCACGGCTCCGCGTGGCCCTGGCGCGGCCGGTGTCGCGGCCGCCCCG GTGGCCATCGCGGGGCCACATCCCGTCTCGCCGGTCATGGGACGAGCCGGACCTGGGATGGCGGCAACGCCGGCTCAGGC TGCGACGCCGGCAAGCGCCGTGCAATCGCGGATCGCACCGATGGGCGCCGCCGCGCAGGGCGCTCGCGCTCAGATGGGCG GCATGAGCGCGATGATGGTCAGTGCGCCGCGCTTCAGCGCAGGCGTGGCTCGCGGCGGAGGCAGCTCCAGGGCCGGGGGA GGGTTCCGCCGACATTGA
Upstream 100 bases:
>100_bases CACCGAAGCGCCGTGAGGTTGCCGCGATAGCCTGTCACCATCCTGGTCGGATCGATGCCGAGCGACGCCGCGTCGCTCGC GCGAGCGGCAGGAGGTGCCC
Downstream 100 bases:
>100_bases CAATGGCGTGAACCGGACGTGCATGAGCGCTTCGAGACATGGGTCCCGCGATCGGCCGTTGGCGACAGAGCGGACGATCA CTACATGCGAGTTGATGACC
Product: hypothetical protein
Products: NA
Alternate protein names: SH3 Type 3 Domain Protein; SH3 Domain-Containing Protein
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MVKFRTCLVATLLIAASTSLATAAPGLVRSSATMRAGPGPGFPMVERIPAGARVTIHGCIQGGAWCDVSFAGERGWIAAR ALAYLYREQYVYLPEYVEYVPVAPFVLTTYWSSFYFGRPWFHRHAYWNRYWRQHPVMAQNPPAPATAPRGPGAAGVAAAP VAIAGPHPVSPVMGRAGPGMAATPAQAATPASAVQSRIAPMGAAAQGARAQMGGMSAMMVSAPRFSAGVARGGGSSRAGG GFRRH
Sequences:
>Translated_245_residues MVKFRTCLVATLLIAASTSLATAAPGLVRSSATMRAGPGPGFPMVERIPAGARVTIHGCIQGGAWCDVSFAGERGWIAAR ALAYLYREQYVYLPEYVEYVPVAPFVLTTYWSSFYFGRPWFHRHAYWNRYWRQHPVMAQNPPAPATAPRGPGAAGVAAAP VAIAGPHPVSPVMGRAGPGMAATPAQAATPASAVQSRIAPMGAAAQGARAQMGGMSAMMVSAPRFSAGVARGGGSSRAGG GFRRH >Mature_245_residues MVKFRTCLVATLLIAASTSLATAAPGLVRSSATMRAGPGPGFPMVERIPAGARVTIHGCIQGGAWCDVSFAGERGWIAAR ALAYLYREQYVYLPEYVEYVPVAPFVLTTYWSSFYFGRPWFHRHAYWNRYWRQHPVMAQNPPAPATAPRGPGAAGVAAAP VAIAGPHPVSPVMGRAGPGMAATPAQAATPASAVQSRIAPMGAAAQGARAQMGGMSAMMVSAPRFSAGVARGGGSSRAGG GFRRH
Specific function: Unknown
COG id: COG4991
COG function: function code S; Uncharacterized protein with a bacterial SH3 domain homologue
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25599; Mature: 25599
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKFRTCLVATLLIAASTSLATAAPGLVRSSATMRAGPGPGFPMVERIPAGARVTIHGCI CCCHHHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEE QGGAWCDVSFAGERGWIAARALAYLYREQYVYLPEYVEYVPVAPFVLTTYWSSFYFGRPW CCCCEEEEEECCCCCHHHHHHHHHHHHHCEEECHHHHHHHCCCHHHHHHHHHHHHCCCCH FHRHAYWNRYWRQHPVMAQNPPAPATAPRGPGAAGVAAAPVAIAGPHPVSPVMGRAGPGM HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCEEECCCCCCCHHHCCCCCCC AATPAQAATPASAVQSRIAPMGAAAQGARAQMGGMSAMMVSAPRFSAGVARGGGSSRAGG CCCCCHHCCCHHHHHHHHCCCCCCCCCCHHHHCCCEEEEEECCCCHHHHCCCCCCCCCCC GFRRH CCCCC >Mature Secondary Structure MVKFRTCLVATLLIAASTSLATAAPGLVRSSATMRAGPGPGFPMVERIPAGARVTIHGCI CCCHHHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEE QGGAWCDVSFAGERGWIAARALAYLYREQYVYLPEYVEYVPVAPFVLTTYWSSFYFGRPW CCCCEEEEEECCCCCHHHHHHHHHHHHHCEEECHHHHHHHCCCHHHHHHHHHHHHCCCCH FHRHAYWNRYWRQHPVMAQNPPAPATAPRGPGAAGVAAAPVAIAGPHPVSPVMGRAGPGM HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCEEECCCCCCCHHHCCCCCCC AATPAQAATPASAVQSRIAPMGAAAQGARAQMGGMSAMMVSAPRFSAGVARGGGSSRAGG CCCCCHHCCCHHHHHHHHCCCCCCCCCCHHHHCCCEEEEEECCCCHHHHCCCCCCCCCCC GFRRH CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA