Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146340414

Identifier: 146340414

GI number: 146340414

Start: 3632362

End: 3633099

Strand: Direct

Name: 146340414

Synonym: BRADO3450

Alternate gene names: NA

Gene position: 3632362-3633099 (Clockwise)

Preceding gene: 146340413

Following gene: 146340415

Centisome position: 48.71

GC content: 68.56

Gene sequence:

>738_bases
GTGGTGAAGTTCAGAACGTGTCTCGTCGCGACGCTGCTGATCGCTGCGTCGACCTCGTTGGCGACAGCTGCTCCCGGTCT
TGTTCGCAGTTCGGCCACGATGCGCGCGGGTCCGGGCCCGGGCTTTCCCATGGTCGAGCGGATTCCGGCGGGTGCCCGTG
TCACCATTCACGGCTGCATTCAAGGCGGTGCATGGTGCGATGTGAGCTTCGCCGGCGAGCGGGGCTGGATCGCGGCGAGA
GCGCTCGCCTATCTCTATCGCGAGCAATACGTCTATCTGCCCGAATATGTCGAATACGTGCCGGTCGCGCCGTTCGTGCT
GACCACCTATTGGAGCAGCTTCTATTTCGGTCGTCCGTGGTTTCACCGCCACGCCTATTGGAATCGCTATTGGCGCCAGC
ATCCCGTCATGGCCCAGAACCCGCCAGCGCCGGCCACGGCTCCGCGTGGCCCTGGCGCGGCCGGTGTCGCGGCCGCCCCG
GTGGCCATCGCGGGGCCACATCCCGTCTCGCCGGTCATGGGACGAGCCGGACCTGGGATGGCGGCAACGCCGGCTCAGGC
TGCGACGCCGGCAAGCGCCGTGCAATCGCGGATCGCACCGATGGGCGCCGCCGCGCAGGGCGCTCGCGCTCAGATGGGCG
GCATGAGCGCGATGATGGTCAGTGCGCCGCGCTTCAGCGCAGGCGTGGCTCGCGGCGGAGGCAGCTCCAGGGCCGGGGGA
GGGTTCCGCCGACATTGA

Upstream 100 bases:

>100_bases
CACCGAAGCGCCGTGAGGTTGCCGCGATAGCCTGTCACCATCCTGGTCGGATCGATGCCGAGCGACGCCGCGTCGCTCGC
GCGAGCGGCAGGAGGTGCCC

Downstream 100 bases:

>100_bases
CAATGGCGTGAACCGGACGTGCATGAGCGCTTCGAGACATGGGTCCCGCGATCGGCCGTTGGCGACAGAGCGGACGATCA
CTACATGCGAGTTGATGACC

Product: hypothetical protein

Products: NA

Alternate protein names: SH3 Type 3 Domain Protein; SH3 Domain-Containing Protein

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MVKFRTCLVATLLIAASTSLATAAPGLVRSSATMRAGPGPGFPMVERIPAGARVTIHGCIQGGAWCDVSFAGERGWIAAR
ALAYLYREQYVYLPEYVEYVPVAPFVLTTYWSSFYFGRPWFHRHAYWNRYWRQHPVMAQNPPAPATAPRGPGAAGVAAAP
VAIAGPHPVSPVMGRAGPGMAATPAQAATPASAVQSRIAPMGAAAQGARAQMGGMSAMMVSAPRFSAGVARGGGSSRAGG
GFRRH

Sequences:

>Translated_245_residues
MVKFRTCLVATLLIAASTSLATAAPGLVRSSATMRAGPGPGFPMVERIPAGARVTIHGCIQGGAWCDVSFAGERGWIAAR
ALAYLYREQYVYLPEYVEYVPVAPFVLTTYWSSFYFGRPWFHRHAYWNRYWRQHPVMAQNPPAPATAPRGPGAAGVAAAP
VAIAGPHPVSPVMGRAGPGMAATPAQAATPASAVQSRIAPMGAAAQGARAQMGGMSAMMVSAPRFSAGVARGGGSSRAGG
GFRRH
>Mature_245_residues
MVKFRTCLVATLLIAASTSLATAAPGLVRSSATMRAGPGPGFPMVERIPAGARVTIHGCIQGGAWCDVSFAGERGWIAAR
ALAYLYREQYVYLPEYVEYVPVAPFVLTTYWSSFYFGRPWFHRHAYWNRYWRQHPVMAQNPPAPATAPRGPGAAGVAAAP
VAIAGPHPVSPVMGRAGPGMAATPAQAATPASAVQSRIAPMGAAAQGARAQMGGMSAMMVSAPRFSAGVARGGGSSRAGG
GFRRH

Specific function: Unknown

COG id: COG4991

COG function: function code S; Uncharacterized protein with a bacterial SH3 domain homologue

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25599; Mature: 25599

Theoretical pI: Translated: 11.43; Mature: 11.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKFRTCLVATLLIAASTSLATAAPGLVRSSATMRAGPGPGFPMVERIPAGARVTIHGCI
CCCHHHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEE
QGGAWCDVSFAGERGWIAARALAYLYREQYVYLPEYVEYVPVAPFVLTTYWSSFYFGRPW
CCCCEEEEEECCCCCHHHHHHHHHHHHHCEEECHHHHHHHCCCHHHHHHHHHHHHCCCCH
FHRHAYWNRYWRQHPVMAQNPPAPATAPRGPGAAGVAAAPVAIAGPHPVSPVMGRAGPGM
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCEEECCCCCCCHHHCCCCCCC
AATPAQAATPASAVQSRIAPMGAAAQGARAQMGGMSAMMVSAPRFSAGVARGGGSSRAGG
CCCCCHHCCCHHHHHHHHCCCCCCCCCCHHHHCCCEEEEEECCCCHHHHCCCCCCCCCCC
GFRRH
CCCCC
>Mature Secondary Structure
MVKFRTCLVATLLIAASTSLATAAPGLVRSSATMRAGPGPGFPMVERIPAGARVTIHGCI
CCCHHHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEE
QGGAWCDVSFAGERGWIAARALAYLYREQYVYLPEYVEYVPVAPFVLTTYWSSFYFGRPW
CCCCEEEEEECCCCCHHHHHHHHHHHHHCEEECHHHHHHHCCCHHHHHHHHHHHHCCCCH
FHRHAYWNRYWRQHPVMAQNPPAPATAPRGPGAAGVAAAPVAIAGPHPVSPVMGRAGPGM
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCEEECCCCCCCHHHCCCCCCC
AATPAQAATPASAVQSRIAPMGAAAQGARAQMGGMSAMMVSAPRFSAGVARGGGSSRAGG
CCCCCHHCCCHHHHHHHHCCCCCCCCCCHHHHCCCEEEEEECCCCHHHHCCCCCCCCCCC
GFRRH
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA