| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146340413
Identifier: 146340413
GI number: 146340413
Start: 3631222
End: 3632061
Strand: Direct
Name: 146340413
Synonym: BRADO3449
Alternate gene names: NA
Gene position: 3631222-3632061 (Clockwise)
Preceding gene: 146340412
Following gene: 146340414
Centisome position: 48.7
GC content: 68.45
Gene sequence:
>840_bases TTGAGCAAGAAGTGCGGGGCCGAGATGAGGCGGCGCAGACGTCTGCACTGGAGCGCTTGGTATCTCGGATTCTGGCTGAT CGCCGGCCCGTGCGGTGTTGCACAGGCCGGGGTCGGCGATCTCTATTCCGCACAGACCGTCGTGACCGGGCAGGGCGAGG ACAACCGGCTGGCCGGCTTCGCGCTCTGTCTCGAGGACGTCCTGATCAAGGTGTCCGGCGCCTATCAGCTCAGCGGAGAC GCCCGGCTCACCCCCTTGAAAGCGCGTGCCCGCGAGTTCGTCACGGGCTTCGACTATCATGACCAGATGTCGGGCAAGCC GAAGCACGACGAGCAAGGGACGCGCGACCGTCCCTTTGACCTCACCATCTCCTTCGATCACGCGAAGATCGACGACGCGC TCGCGCAGCTCGGCGTGAAGCCGTGGCGGGCGGCGCGGCCGCCGCTCGGCGTGATCGTGGCCATGACCTCCGGCAACAGG AGCTATTTGGTCGTCTCGGACGATCGGCAGTCCGATCTGCAACGCGACGCGCTGCGCGCGGCTGCCAGCAAGCGCGGCCT TGACGTGGTGCTTCCGACCACCGCGCAGGCCAGCAGCGTCGATGCGGGCGGCGCTGAGCTGCCGCCGCCTACGCTTGCGG CCGCGCTGCCGGACGCCGGGATGACCTTGCTGGGTCGCCTCACATGGGACGACGACGCGCTCAGCTGGGTCTCGCAATGG CAGCTCGACGCCTCCGGTGCACAGCATCGCTGGCGGGTCGGCGCTGCAACGTTCGACGATGCATTCCGGCGCGCGTTGGG CGGCGCGGCACAGATCCTGTCGGGCAACGGCGCACCGTGA
Upstream 100 bases:
>100_bases GATGATCGAGGAGGTTCACGCCGGCGATCGCGTGACGTTCTCGACGTCGGATGACGGCGGCAAGACGACCATCGTCAAGC TCGATCGGCAGAAATAGAGC
Downstream 100 bases:
>100_bases CCGGCGTCCGGGCTGCGCGATCCATTTCCGGCTCAGATGTTCATCGCGATCCTCATCGCAACAAGCGTGCCGTCAGCCAT CGTCGTGCCTGACTTGCACG
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSKKCGAEMRRRRRLHWSAWYLGFWLIAGPCGVAQAGVGDLYSAQTVVTGQGEDNRLAGFALCLEDVLIKVSGAYQLSGD ARLTPLKARAREFVTGFDYHDQMSGKPKHDEQGTRDRPFDLTISFDHAKIDDALAQLGVKPWRAARPPLGVIVAMTSGNR SYLVVSDDRQSDLQRDALRAAASKRGLDVVLPTTAQASSVDAGGAELPPPTLAAALPDAGMTLLGRLTWDDDALSWVSQW QLDASGAQHRWRVGAATFDDAFRRALGGAAQILSGNGAP
Sequences:
>Translated_279_residues MSKKCGAEMRRRRRLHWSAWYLGFWLIAGPCGVAQAGVGDLYSAQTVVTGQGEDNRLAGFALCLEDVLIKVSGAYQLSGD ARLTPLKARAREFVTGFDYHDQMSGKPKHDEQGTRDRPFDLTISFDHAKIDDALAQLGVKPWRAARPPLGVIVAMTSGNR SYLVVSDDRQSDLQRDALRAAASKRGLDVVLPTTAQASSVDAGGAELPPPTLAAALPDAGMTLLGRLTWDDDALSWVSQW QLDASGAQHRWRVGAATFDDAFRRALGGAAQILSGNGAP >Mature_278_residues SKKCGAEMRRRRRLHWSAWYLGFWLIAGPCGVAQAGVGDLYSAQTVVTGQGEDNRLAGFALCLEDVLIKVSGAYQLSGDA RLTPLKARAREFVTGFDYHDQMSGKPKHDEQGTRDRPFDLTISFDHAKIDDALAQLGVKPWRAARPPLGVIVAMTSGNRS YLVVSDDRQSDLQRDALRAAASKRGLDVVLPTTAQASSVDAGGAELPPPTLAAALPDAGMTLLGRLTWDDDALSWVSQWQ LDASGAQHRWRVGAATFDDAFRRALGGAAQILSGNGAP
Specific function: Unknown
COG id: COG3249
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30030; Mature: 29899
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKCGAEMRRRRRLHWSAWYLGFWLIAGPCGVAQAGVGDLYSAQTVVTGQGEDNRLAGF CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEECCCCCCCHHHH ALCLEDVLIKVSGAYQLSGDARLTPLKARAREFVTGFDYHDQMSGKPKHDEQGTRDRPFD HHHHHHHHHHCCCCEEECCCCEECHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCEE LTISFDHAKIDDALAQLGVKPWRAARPPLGVIVAMTSGNRSYLVVSDDRQSDLQRDALRA EEEEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHH AASKRGLDVVLPTTAQASSVDAGGAELPPPTLAAALPDAGMTLLGRLTWDDDALSWVSQW HHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCHHHHHHHHHH QLDASGAQHRWRVGAATFDDAFRRALGGAAQILSGNGAP CCCCCCCCCEEEECCCHHHHHHHHHHCCHHEEECCCCCC >Mature Secondary Structure SKKCGAEMRRRRRLHWSAWYLGFWLIAGPCGVAQAGVGDLYSAQTVVTGQGEDNRLAGF CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEECCCCCCCHHHH ALCLEDVLIKVSGAYQLSGDARLTPLKARAREFVTGFDYHDQMSGKPKHDEQGTRDRPFD HHHHHHHHHHCCCCEEECCCCEECHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCEE LTISFDHAKIDDALAQLGVKPWRAARPPLGVIVAMTSGNRSYLVVSDDRQSDLQRDALRA EEEEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHH AASKRGLDVVLPTTAQASSVDAGGAELPPPTLAAALPDAGMTLLGRLTWDDDALSWVSQW HHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCHHHHHHHHHH QLDASGAQHRWRVGAATFDDAFRRALGGAAQILSGNGAP CCCCCCCCCEEEECCCHHHHHHHHHHCCHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA