Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340334
Identifier: 146340334
GI number: 146340334
Start: 3553866
End: 3554501
Strand: Reverse
Name: 146340334
Synonym: BRADO3361
Alternate gene names: NA
Gene position: 3554501-3553866 (Counterclockwise)
Preceding gene: 146340335
Following gene: 146340331
Centisome position: 47.67
GC content: 65.72
Gene sequence:
>636_bases TTGCCGATGGCGCGGCTGGCCTTCGTCGGGGAGCGCATCGCCATCCAACCTCTCCTGTTTGCGTGCGGGCCCGACGTGAT TCACAACAAGATCAGCTACTACGCCGAACTGTTCATCTATCCGATCGTCATCGTCGCGCTGCTGCTGCTCGATCTCGCGC GCCACGGCTTCGCCGCGCATCCGCGCTGGCTGCTGGCGGCCGCCGGCGGCGCGATGCTGTGGACGCTGGCCGAATATCTC GTGCACCGCTTCCTGTATCATGAGGTCGCCGTCCTGAAGCAGCTCCACGGCCTGCATCATGACCGGCCGAGCGATCTCAT CGGCTCACCGGTCTGGGTGAGCGTCGTCATCTTCGCGAGCTTCTTCGCGCTGGTGGCGCAGGTGGTGGACCTGCAGATAG CGAGTGGCATGACCGCCGGCCTGCTGGCGGGCTATCTGTTGTATCTTCTGGTCCACGATGCGGTGCATCGCTGGCCTCTG GCGGGGCCGTTGCCGCTGCATGCCTGGCTGCGCGGCTGCCGGCTGCGTCATATCCGCCATCATCGCGACCCCCATCCCGG CAATTTCGGCGTCGTCACCGCGTTCTGGGACGAGGTGTTTGGAACCGCGCTGGCAAGGCCGACGCGCAACGCCTGA
Upstream 100 bases:
>100_bases GGCCATCGGCGTTCTCGAGCCCCGTACATTCACGTGGGCGACTTATGTCTGCGCTATCTCAGCTCCGTGACACGCTCCGC GACGGCGGCTGATTCGGCGC
Downstream 100 bases:
>100_bases GCGGCGAGGCCTGGTCACCGGCTGATCGGCATGCCGCCCTCTCTCACCCACAACAGCGTGAGGCGGGTCGGCGCCGCGCG CGGCAACGGCCTGGCATTGC
Product: putative fatty acid hydroxylase family protein
Products: NA
Alternate protein names: Fatty Acid Hydroxylase Family Protein
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MPMARLAFVGERIAIQPLLFACGPDVIHNKISYYAELFIYPIVIVALLLLDLARHGFAAHPRWLLAAAGGAMLWTLAEYL VHRFLYHEVAVLKQLHGLHHDRPSDLIGSPVWVSVVIFASFFALVAQVVDLQIASGMTAGLLAGYLLYLLVHDAVHRWPL AGPLPLHAWLRGCRLRHIRHHRDPHPGNFGVVTAFWDEVFGTALARPTRNA
Sequences:
>Translated_211_residues MPMARLAFVGERIAIQPLLFACGPDVIHNKISYYAELFIYPIVIVALLLLDLARHGFAAHPRWLLAAAGGAMLWTLAEYL VHRFLYHEVAVLKQLHGLHHDRPSDLIGSPVWVSVVIFASFFALVAQVVDLQIASGMTAGLLAGYLLYLLVHDAVHRWPL AGPLPLHAWLRGCRLRHIRHHRDPHPGNFGVVTAFWDEVFGTALARPTRNA >Mature_210_residues PMARLAFVGERIAIQPLLFACGPDVIHNKISYYAELFIYPIVIVALLLLDLARHGFAAHPRWLLAAAGGAMLWTLAEYLV HRFLYHEVAVLKQLHGLHHDRPSDLIGSPVWVSVVIFASFFALVAQVVDLQIASGMTAGLLAGYLLYLLVHDAVHRWPLA GPLPLHAWLRGCRLRHIRHHRDPHPGNFGVVTAFWDEVFGTALARPTRNA
Specific function: Unknown
COG id: COG3000
COG function: function code I; Sterol desaturase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323928, Length=149, Percent_Identity=36.241610738255, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23548; Mature: 23417
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMARLAFVGERIAIQPLLFACGPDVIHNKISYYAELFIYPIVIVALLLLDLARHGFAAH CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PRWLLAAAGGAMLWTLAEYLVHRFLYHEVAVLKQLHGLHHDRPSDLIGSPVWVSVVIFAS CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHH FFALVAQVVDLQIASGMTAGLLAGYLLYLLVHDAVHRWPLAGPLPLHAWLRGCRLRHIRH HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH HRDPHPGNFGVVTAFWDEVFGTALARPTRNA CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PMARLAFVGERIAIQPLLFACGPDVIHNKISYYAELFIYPIVIVALLLLDLARHGFAAH CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PRWLLAAAGGAMLWTLAEYLVHRFLYHEVAVLKQLHGLHHDRPSDLIGSPVWVSVVIFAS CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHH FFALVAQVVDLQIASGMTAGLLAGYLLYLLVHDAVHRWPLAGPLPLHAWLRGCRLRHIRH HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH HRDPHPGNFGVVTAFWDEVFGTALARPTRNA CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA