| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340304
Identifier: 146340304
GI number: 146340304
Start: 3524306
End: 3525475
Strand: Reverse
Name: 146340304
Synonym: BRADO3327
Alternate gene names: NA
Gene position: 3525475-3524306 (Counterclockwise)
Preceding gene: 146340308
Following gene: 146340303
Centisome position: 47.28
GC content: 64.36
Gene sequence:
>1170_bases ATGGGGTCCATCGACAGGTACATCTTTCGCACGACGCTGGCGTCGTTTGCGTTGGTGCTGGTCAGCCTCACCGGCGTCAT CTGGATTACACAGGCGCTTCGCGGCATCGACCTGATGACCAGCCAGGGCCAGACCATCCTGACCTTTCTCGGCATCACCG GCCTGGTCATTCCCTCGCTGCTTGGCGTCATCGCGCCGATTGCGCTGATGATCGCCGTCTCGCATACGCTGAACAAGCTC GCGACCGACTCCGAGATCATCGTGATGAACGCCGCCGGCATGTCGCCGATCCGGCTGTTCGTGCCGTTCGCCTATGCCAC CTGCGTGGTCGCCCTGCTCGTCACCCTGCTGGCGTCCTACATCGCGCCCGACGGCCTGCGCCGGATCAAGCAGTGGGACG CCGAGATCACCGCCGACGTGCTCACCAACATCCTGCAGCCCGGTCGTTTTGCGCAGCTCGACCAGAATCTGACGATCCGG ATCGGCGAGCGCCAGCCGGGCGGCGAACTGAAGAACATCCTGATCGATGACCGCCGCGATCCGAAGGAGCGGATCACGAT CATCGCCGAAAAGGGCACCGTGGTGAAGAACGCCGACGGCTCGTTCCTGGTGCTGGAGGACGGCAATCTGGAGCGGTTCG AGATCGGCAAGCGCGAGCCGGCCATGGTGGCGTTCGCGCGCTACGCCTTCGACATGTCGAAATTCTCGAATCAGGGCCGC GACGTCACGCTTGGCATCCGCGAGCGCTACGTCTGGGAGCTGATGGCGCCGGCCGAGGATGACCCGATCTACAAGCAGAT CCCCGGACAATTCCGGCAGGAATTGCACGACCGCTTCCTGGCCCCGATCTATCCGTTCGCCTTCGCCGCCCTCACCTTCG CGTTTCTCGGGGCGCCGCGCACCACTCGCCAGAGCCGCAACTTCTCGTTCGGCAGCGCCATCCTCGCCGTGTTCGGCGTG CGAATGGCCGGCTTCGCCTGCTCGGTGATGACTGTGAAAACCCCGATCGCGGCGCTGATCCAGTACGTGATGCTGTTCGG TGTCCTCGCGCTGTCGATCTGGATCATCGTCGGCGGCGTGGTCGTCGAGCCGCCGGCGCGGCTGATGGAGGCGATCAACC GCTCAAATGCGCGAATCGCGCGGCTGTTCAGAAGGCCCGCCACCGCATGA
Upstream 100 bases:
>100_bases CGGCCCTTGGAACGCGACGGCGACAGCAAGCTTCGGACCCGTTTCAAGGTCGGCTGCAGCGCTCGTTCCGGGACTGCTGA TTGGGGATCGAGCGCACACG
Downstream 100 bases:
>100_bases GCATGGTCACCAACACACTTGGCCGCTACTTCGCCGGCCGTTTCCTGGTCTCCGCTGTCGGCGTGTTCGCGAGCATCTTC CTGCTCCTCGTGCTCGTCGA
Product: putative permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MGSIDRYIFRTTLASFALVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITGLVIPSLLGVIAPIALMIAVSHTLNKL ATDSEIIVMNAAGMSPIRLFVPFAYATCVVALLVTLLASYIAPDGLRRIKQWDAEITADVLTNILQPGRFAQLDQNLTIR IGERQPGGELKNILIDDRRDPKERITIIAEKGTVVKNADGSFLVLEDGNLERFEIGKREPAMVAFARYAFDMSKFSNQGR DVTLGIRERYVWELMAPAEDDPIYKQIPGQFRQELHDRFLAPIYPFAFAALTFAFLGAPRTTRQSRNFSFGSAILAVFGV RMAGFACSVMTVKTPIAALIQYVMLFGVLALSIWIIVGGVVVEPPARLMEAINRSNARIARLFRRPATA
Sequences:
>Translated_389_residues MGSIDRYIFRTTLASFALVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITGLVIPSLLGVIAPIALMIAVSHTLNKL ATDSEIIVMNAAGMSPIRLFVPFAYATCVVALLVTLLASYIAPDGLRRIKQWDAEITADVLTNILQPGRFAQLDQNLTIR IGERQPGGELKNILIDDRRDPKERITIIAEKGTVVKNADGSFLVLEDGNLERFEIGKREPAMVAFARYAFDMSKFSNQGR DVTLGIRERYVWELMAPAEDDPIYKQIPGQFRQELHDRFLAPIYPFAFAALTFAFLGAPRTTRQSRNFSFGSAILAVFGV RMAGFACSVMTVKTPIAALIQYVMLFGVLALSIWIIVGGVVVEPPARLMEAINRSNARIARLFRRPATA >Mature_388_residues GSIDRYIFRTTLASFALVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITGLVIPSLLGVIAPIALMIAVSHTLNKLA TDSEIIVMNAAGMSPIRLFVPFAYATCVVALLVTLLASYIAPDGLRRIKQWDAEITADVLTNILQPGRFAQLDQNLTIRI GERQPGGELKNILIDDRRDPKERITIIAEKGTVVKNADGSFLVLEDGNLERFEIGKREPAMVAFARYAFDMSKFSNQGRD VTLGIRERYVWELMAPAEDDPIYKQIPGQFRQELHDRFLAPIYPFAFAALTFAFLGAPRTTRQSRNFSFGSAILAVFGVR MAGFACSVMTVKTPIAALIQYVMLFGVLALSIWIIVGGVVVEPPARLMEAINRSNARIARLFRRPATA
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005495 [H]
Pfam domain/function: PF03739 YjgP_YjgQ [H]
EC number: NA
Molecular weight: Translated: 42883; Mature: 42752
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSIDRYIFRTTLASFALVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITGLVIPSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHH LGVIAPIALMIAVSHTLNKLATDSEIIVMNAAGMSPIRLFVPFAYATCVVALLVTLLASY HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IAPDGLRRIKQWDAEITADVLTNILQPGRFAQLDQNLTIRIGERQPGGELKNILIDDRRD HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCC PKERITIIAEKGTVVKNADGSFLVLEDGNLERFEIGKREPAMVAFARYAFDMSKFSNQGR CHHHEEEEEECCCEEECCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCC DVTLGIRERYVWELMAPAEDDPIYKQIPGQFRQELHDRFLAPIYPFAFAALTFAFLGAPR EEEEEHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TTRQSRNFSFGSAILAVFGVRMAGFACSVMTVKTPIAALIQYVMLFGVLALSIWIIVGGV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE VVEPPARLMEAINRSNARIARLFRRPATA EECCHHHHHHHHCCCCHHHHHHHHCCCCC >Mature Secondary Structure GSIDRYIFRTTLASFALVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITGLVIPSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHH LGVIAPIALMIAVSHTLNKLATDSEIIVMNAAGMSPIRLFVPFAYATCVVALLVTLLASY HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IAPDGLRRIKQWDAEITADVLTNILQPGRFAQLDQNLTIRIGERQPGGELKNILIDDRRD HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCC PKERITIIAEKGTVVKNADGSFLVLEDGNLERFEIGKREPAMVAFARYAFDMSKFSNQGR CHHHEEEEEECCCEEECCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCC DVTLGIRERYVWELMAPAEDDPIYKQIPGQFRQELHDRFLAPIYPFAFAALTFAFLGAPR EEEEEHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TTRQSRNFSFGSAILAVFGVRMAGFACSVMTVKTPIAALIQYVMLFGVLALSIWIIVGGV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE VVEPPARLMEAINRSNARIARLFRRPATA EECCHHHHHHHHCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]