BacMap

Definition	Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession	NC_009445
Length	7,456,587

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The map label for this gene is deaD [H]

Identifier: 146340215

GI number: 146340215

Start: 3435123

End: 3437027

Strand: Direct

Name: deaD [H]

Synonym: BRADO3233

Alternate gene names: 146340215

Gene position: 3435123-3437027 (Clockwise)

Preceding gene: 146340207

Following gene: 146340216

Centisome position: 46.07

GC content: 70.34

Gene sequence:

>1905_bases
TTGGCCGAGCGCAATTATGTGAATCCCACGCCGGTCCAGCTCGCCGTGCTCGCCGAGGACGCCGAGGGTCGCGACCTCCT
GGTGTCGGCGCAGACGGGCTCGGGCAAAACCGTCGCTTACGGGCTCGCAATGGCGGCGAACATGCTCGGCGAGGCCGAGC
GGTTCGGCCCGGCCGCCGCGCCGCTGGCGCTGATCGTGGCGCCGACGCGCGAGTTGGCGCTGCAGGTGCAGCGCGAGCTG
GCCTGGCTGTACCAGCATGCCGGCGCGCGGGTGATCTCCTGCGTCGGCGGCATGGATCCGCGCCGCGAGCAGCGTGAGCT
GGAGGCGGGCGCGCATATCGTCGTCGGCACGCCGGGGCGGCTGTGCGATCATCTTCGCCGCGGGCGGCTCGACATCTCGG
AGCTGAAGGCCGTGGTGCTCGACGAGGCCGACGAGATGCTCAACCTCGGCTTCCGCGAGGATCTGGAGTTCATCCTCGAG
ACCACGCCGGAGACTCGCCGCACGCTCTTGTTCTCGGCAACCTTTCCCCGCGGCATCGTGGCACTGGCGAAGCAGTATCA
GGACGACGCGTTCCGCATCGAGGTCGAGGGCGACGAGGGCGGGCACGCTGACATCGAGTATCGCGCCATCCGCATCGCGC
CCGATGATGCCGAGCATGCGGTGGTCAACCTGTTGCGGTTCTACGAATCGCCGAGCGCGATCGTGTTCTGCAACACGCGC
GAGGCGGTGCGGCATCTGCAGGCGGCGCTGCTCGAGCGCGGCTTCTCGGTCGTCGCGCTGTCCGGCGAATTGACGCAGAA
CGAGCGCACGATGGCGCTGCAGTCGCTGCGCGACGGCCGCTCGCGCGTCTGCGTGGCGACCGACGTCGCGGCGCGCGGCA
TCGATCTCGCCAATCTCGATCTCGTCATCCATGCCGAGCTGCCGAACGATCCCGAGGTGATGCAGCATCGCTCGGGGCGC
ACGGGGCGGGCCGGGCGCAAGGGCGTCAGCGTACTCCTGGTGTCGCCGGCGCGGCGGCGGCGCGCGGAGATGCTGCTGAA
GCTCGCAGGAATCGAGGCGGAGTGGGGCGCGGCGCCGCAGGCCGAGGAGATCCGCAAGCTCGACCAGGAGCGCATGCTGC
AGGATTCGGTGCTGACCGAGGAGTCGACGGCGGAGGACCTGGCGCTGGCGCAGGCGCTGCTCGCGGAGCGCTCGCCGGAA
GATATCGCCGCAGCACTGGTGCGGCTCTATCGCGCGAGGCTGCCGTCGCCGGAGGACATTCTCGATCCCGGCGAGGACCG
CGGCCGGTCGCGGCCCGATCGTGCCGCGCGCGAGCGGCCGTCACGGGGGGAGGAGCGGGCGCCGGCGCCGCGCACCAAGG
GCGGCAAGCCGTCGCGCCACGGCATGGGCGAGCCGAGCGTCTGGTTCCGCGCGGCAATCGGTCGCCGCAAGAACGCGGAG
GCGCGCTGGCTGTTACCGATGATCTGCCGGCGCGGCGGCATCGACAAGCAGGACATCGGTGCGATCAAGATCTCGGACAC
CACGACCGAATTCGAGATCGCCGCGCGCGTCGCCGACAGCTTCACCGCCAACATCCGCCGGCCCGACAAGGAGGATACGA
TCCGGATCGAACCGCTCGCCGCCGCGCCGTCGGCAGCGGCCCGGCCCGACAAGCCGCCGCGGCGCAAGGCGGACGAGGGC
AGCTATCATCCGCTCGATCGTGACGAGCCGCGCGACAGAGCGGACGACAAGCCGCGCGGCAAGCCGCCTCGCGACCATCA
GCCGAAATCATTCCGCGAACCGGCGTTCGCGAAGAAAAAGAAGCACCGCGACAAGTCCAGCCCTGGCGGACAGGCGTTTC
GTTCGAGCAACCCGCACGCGAAAGCGCCGGGTGGCAAGAAGCCGAAGGCCAAGCGTCGCGGCTGA

Upstream 100 bases:

>100_bases
TGGCCCTCGTGTTCCGGCGCGGCATGGCGTAAAGCAGCCGGAATCGAAGAGAGGTCTTTCCTTGTCATTCCCCGCGACCA
CCCCGCCGCTGGCCCGCGCT

Downstream 100 bases:

>100_bases
CCCAGCCGGTTGATCTTGCTGAAGTCGACCGGCAAACGTGAAGGAGGAGCCGTCCTTGAGCCGCTACGCCGTTCTGTATT
TCGCCACGCTCGCCGTGCTG

Product: putative DEAD-box cold-shock protein, ATP-independent RNA helicase

Products: NA

Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]

Number of amino acids: Translated: 634; Mature: 633

Protein sequence:

>634_residues
MAERNYVNPTPVQLAVLAEDAEGRDLLVSAQTGSGKTVAYGLAMAANMLGEAERFGPAAAPLALIVAPTRELALQVQREL
AWLYQHAGARVISCVGGMDPRREQRELEAGAHIVVGTPGRLCDHLRRGRLDISELKAVVLDEADEMLNLGFREDLEFILE
TTPETRRTLLFSATFPRGIVALAKQYQDDAFRIEVEGDEGGHADIEYRAIRIAPDDAEHAVVNLLRFYESPSAIVFCNTR
EAVRHLQAALLERGFSVVALSGELTQNERTMALQSLRDGRSRVCVATDVAARGIDLANLDLVIHAELPNDPEVMQHRSGR
TGRAGRKGVSVLLVSPARRRRAEMLLKLAGIEAEWGAAPQAEEIRKLDQERMLQDSVLTEESTAEDLALAQALLAERSPE
DIAAALVRLYRARLPSPEDILDPGEDRGRSRPDRAARERPSRGEERAPAPRTKGGKPSRHGMGEPSVWFRAAIGRRKNAE
ARWLLPMICRRGGIDKQDIGAIKISDTTTEFEIAARVADSFTANIRRPDKEDTIRIEPLAAAPSAAARPDKPPRRKADEG
SYHPLDRDEPRDRADDKPRGKPPRDHQPKSFREPAFAKKKKHRDKSSPGGQAFRSSNPHAKAPGGKKPKAKRRG

Sequences:

>Translated_634_residues
MAERNYVNPTPVQLAVLAEDAEGRDLLVSAQTGSGKTVAYGLAMAANMLGEAERFGPAAAPLALIVAPTRELALQVQREL
AWLYQHAGARVISCVGGMDPRREQRELEAGAHIVVGTPGRLCDHLRRGRLDISELKAVVLDEADEMLNLGFREDLEFILE
TTPETRRTLLFSATFPRGIVALAKQYQDDAFRIEVEGDEGGHADIEYRAIRIAPDDAEHAVVNLLRFYESPSAIVFCNTR
EAVRHLQAALLERGFSVVALSGELTQNERTMALQSLRDGRSRVCVATDVAARGIDLANLDLVIHAELPNDPEVMQHRSGR
TGRAGRKGVSVLLVSPARRRRAEMLLKLAGIEAEWGAAPQAEEIRKLDQERMLQDSVLTEESTAEDLALAQALLAERSPE
DIAAALVRLYRARLPSPEDILDPGEDRGRSRPDRAARERPSRGEERAPAPRTKGGKPSRHGMGEPSVWFRAAIGRRKNAE
ARWLLPMICRRGGIDKQDIGAIKISDTTTEFEIAARVADSFTANIRRPDKEDTIRIEPLAAAPSAAARPDKPPRRKADEG
SYHPLDRDEPRDRADDKPRGKPPRDHQPKSFREPAFAKKKKHRDKSSPGGQAFRSSNPHAKAPGGKKPKAKRRG
>Mature_633_residues
AERNYVNPTPVQLAVLAEDAEGRDLLVSAQTGSGKTVAYGLAMAANMLGEAERFGPAAAPLALIVAPTRELALQVQRELA
WLYQHAGARVISCVGGMDPRREQRELEAGAHIVVGTPGRLCDHLRRGRLDISELKAVVLDEADEMLNLGFREDLEFILET
TPETRRTLLFSATFPRGIVALAKQYQDDAFRIEVEGDEGGHADIEYRAIRIAPDDAEHAVVNLLRFYESPSAIVFCNTRE
AVRHLQAALLERGFSVVALSGELTQNERTMALQSLRDGRSRVCVATDVAARGIDLANLDLVIHAELPNDPEVMQHRSGRT
GRAGRKGVSVLLVSPARRRRAEMLLKLAGIEAEWGAAPQAEEIRKLDQERMLQDSVLTEESTAEDLALAQALLAERSPED
IAAALVRLYRARLPSPEDILDPGEDRGRSRPDRAARERPSRGEERAPAPRTKGGKPSRHGMGEPSVWFRAAIGRRKNAEA
RWLLPMICRRGGIDKQDIGAIKISDTTTEFEIAARVADSFTANIRRPDKEDTIRIEPLAAAPSAAARPDKPPRRKADEGS
YHPLDRDEPRDRADDKPRGKPPRDHQPKSFREPAFAKKKKHRDKSSPGGQAFRSSNPHAKAPGGKKPKAKRRG

Specific function: Has a helix-destabilizing activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=329, Percent_Identity=35.5623100303951, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI13129006, Length=367, Percent_Identity=34.3324250681199, Blast_Score=214, Evalue=3e-55,
Organism=Homo sapiens, GI50659095, Length=368, Percent_Identity=34.5108695652174, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI41327773, Length=351, Percent_Identity=35.3276353276353, Blast_Score=207, Evalue=3e-53,
Organism=Homo sapiens, GI301171467, Length=360, Percent_Identity=35.2777777777778, Blast_Score=206, Evalue=6e-53,
Organism=Homo sapiens, GI87196351, Length=360, Percent_Identity=35.2777777777778, Blast_Score=205, Evalue=9e-53,
Organism=Homo sapiens, GI301171475, Length=360, Percent_Identity=35.2777777777778, Blast_Score=205, Evalue=1e-52,
Organism=Homo sapiens, GI169881239, Length=360, Percent_Identity=35.5555555555556, Blast_Score=202, Evalue=8e-52,
Organism=Homo sapiens, GI13514809, Length=360, Percent_Identity=35.5555555555556, Blast_Score=202, Evalue=8e-52,
Organism=Homo sapiens, GI45446747, Length=345, Percent_Identity=34.2028985507246, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI45446743, Length=345, Percent_Identity=34.2028985507246, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI262118318, Length=336, Percent_Identity=34.5238095238095, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI216548263, Length=339, Percent_Identity=34.2182890855457, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI13518015, Length=339, Percent_Identity=34.2182890855457, Blast_Score=190, Evalue=4e-48,
Organism=Homo sapiens, GI262231852, Length=339, Percent_Identity=34.2182890855457, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI31542656, Length=336, Percent_Identity=36.3095238095238, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI21071032, Length=375, Percent_Identity=32.2666666666667, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI148613856, Length=354, Percent_Identity=32.2033898305085, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI38201710, Length=354, Percent_Identity=32.2033898305085, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI20149629, Length=331, Percent_Identity=31.1178247734139, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI224593278, Length=394, Percent_Identity=32.48730964467, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI41327771, Length=359, Percent_Identity=31.1977715877437, Blast_Score=186, Evalue=6e-47,
Organism=Homo sapiens, GI83700235, Length=336, Percent_Identity=36.6071428571429, Blast_Score=186, Evalue=9e-47,
Organism=Homo sapiens, GI4503529, Length=336, Percent_Identity=36.9047619047619, Blast_Score=184, Evalue=3e-46,
Organism=Homo sapiens, GI222352149, Length=346, Percent_Identity=32.0809248554913, Blast_Score=182, Evalue=1e-45,
Organism=Homo sapiens, GI164664518, Length=359, Percent_Identity=29.2479108635098, Blast_Score=179, Evalue=7e-45,
Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=31.1614730878187, Blast_Score=176, Evalue=8e-44,
Organism=Homo sapiens, GI188035877, Length=346, Percent_Identity=31.2138728323699, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI38327634, Length=350, Percent_Identity=32.8571428571429, Blast_Score=163, Evalue=5e-40,
Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=28.735632183908, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI164419743, Length=338, Percent_Identity=29.8816568047337, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI51094101, Length=338, Percent_Identity=29.8816568047337, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI4758112, Length=337, Percent_Identity=28.1899109792285, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI18375623, Length=337, Percent_Identity=28.1899109792285, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI21040371, Length=337, Percent_Identity=28.1899109792285, Blast_Score=154, Evalue=3e-37,
Organism=Homo sapiens, GI17505907, Length=387, Percent_Identity=30.2325581395349, Blast_Score=154, Evalue=3e-37,
Organism=Homo sapiens, GI256223453, Length=351, Percent_Identity=27.9202279202279, Blast_Score=153, Evalue=5e-37,
Organism=Homo sapiens, GI41327779, Length=354, Percent_Identity=31.0734463276836, Blast_Score=153, Evalue=5e-37,
Organism=Homo sapiens, GI164419732, Length=321, Percent_Identity=32.7102803738318, Blast_Score=152, Evalue=7e-37,
Organism=Homo sapiens, GI41327776, Length=331, Percent_Identity=28.3987915407855, Blast_Score=149, Evalue=7e-36,
Organism=Homo sapiens, GI6005743, Length=322, Percent_Identity=33.2298136645963, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI13514831, Length=352, Percent_Identity=28.9772727272727, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI62241024, Length=322, Percent_Identity=33.2298136645963, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI62241022, Length=322, Percent_Identity=33.2298136645963, Blast_Score=146, Evalue=6e-35,
Organism=Homo sapiens, GI8922886, Length=322, Percent_Identity=32.6086956521739, Blast_Score=146, Evalue=6e-35,
Organism=Homo sapiens, GI38569505, Length=335, Percent_Identity=29.5522388059701, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI38569503, Length=335, Percent_Identity=29.5522388059701, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI9966805, Length=306, Percent_Identity=30.0653594771242, Blast_Score=128, Evalue=2e-29,
Organism=Homo sapiens, GI256773275, Length=345, Percent_Identity=28.9855072463768, Blast_Score=127, Evalue=4e-29,
Organism=Homo sapiens, GI9506931, Length=373, Percent_Identity=27.0777479892761, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI4826686, Length=346, Percent_Identity=27.4566473988439, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI20336298, Length=337, Percent_Identity=28.486646884273, Blast_Score=111, Evalue=3e-24,
Organism=Escherichia coli, GI87082221, Length=527, Percent_Identity=34.5351043643264, Blast_Score=245, Evalue=5e-66,
Organism=Escherichia coli, GI1787605, Length=371, Percent_Identity=37.1967654986523, Blast_Score=235, Evalue=6e-63,
Organism=Escherichia coli, GI1787016, Length=334, Percent_Identity=34.7305389221557, Blast_Score=192, Evalue=8e-50,
Organism=Escherichia coli, GI1788930, Length=339, Percent_Identity=36.283185840708, Blast_Score=183, Evalue=4e-47,
Organism=Escherichia coli, GI1790214, Length=364, Percent_Identity=32.967032967033, Blast_Score=173, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI71987143, Length=357, Percent_Identity=35.5742296918768, Blast_Score=228, Evalue=9e-60,
Organism=Caenorhabditis elegans, GI71995724, Length=329, Percent_Identity=35.8662613981763, Blast_Score=212, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI17507121, Length=329, Percent_Identity=35.8662613981763, Blast_Score=211, Evalue=7e-55,
Organism=Caenorhabditis elegans, GI86570094, Length=341, Percent_Identity=37.2434017595308, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17555296, Length=384, Percent_Identity=32.2916666666667, Blast_Score=196, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI115533224, Length=348, Percent_Identity=34.1954022988506, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI32565321, Length=365, Percent_Identity=32.8767123287671, Blast_Score=193, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI17552114, Length=351, Percent_Identity=30.4843304843305, Blast_Score=191, Evalue=7e-49,
Organism=Caenorhabditis elegans, GI17552642, Length=334, Percent_Identity=35.0299401197605, Blast_Score=185, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI17510307, Length=349, Percent_Identity=34.9570200573066, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17510309, Length=349, Percent_Identity=34.9570200573066, Blast_Score=183, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI71995514, Length=349, Percent_Identity=34.9570200573066, Blast_Score=183, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17507945, Length=368, Percent_Identity=31.7934782608696, Blast_Score=182, Evalue=6e-46,
Organism=Caenorhabditis elegans, GI71999644, Length=337, Percent_Identity=31.7507418397626, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI71999646, Length=337, Percent_Identity=31.7507418397626, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI71995718, Length=364, Percent_Identity=33.5164835164835, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17509811, Length=344, Percent_Identity=31.6860465116279, Blast_Score=175, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI17510559, Length=363, Percent_Identity=31.404958677686, Blast_Score=169, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI17537549, Length=356, Percent_Identity=32.0224719101124, Blast_Score=168, Evalue=7e-42,
Organism=Caenorhabditis elegans, GI193206561, Length=332, Percent_Identity=30.1204819277108, Blast_Score=166, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI71982858, Length=337, Percent_Identity=28.1899109792285, Blast_Score=162, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI115532548, Length=338, Percent_Identity=33.1360946745562, Blast_Score=159, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI115532546, Length=338, Percent_Identity=33.1360946745562, Blast_Score=158, Evalue=9e-39,
Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=30.5699481865285, Blast_Score=153, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI32564046, Length=385, Percent_Identity=31.6883116883117, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17507877, Length=377, Percent_Identity=29.973474801061, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=29.6495956873315, Blast_Score=149, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17507881, Length=355, Percent_Identity=29.0140845070423, Blast_Score=144, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI193208216, Length=373, Percent_Identity=30.2949061662198, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17536103, Length=340, Percent_Identity=29.1176470588235, Blast_Score=139, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI17536099, Length=340, Percent_Identity=29.1176470588235, Blast_Score=138, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17536101, Length=340, Percent_Identity=29.1176470588235, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI71990816, Length=350, Percent_Identity=30, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17553716, Length=324, Percent_Identity=28.7037037037037, Blast_Score=135, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI17508543, Length=351, Percent_Identity=28.4900284900285, Blast_Score=132, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI17505370, Length=334, Percent_Identity=28.7425149700599, Blast_Score=132, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI17556951, Length=379, Percent_Identity=26.9129287598945, Blast_Score=125, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI71997889, Length=374, Percent_Identity=27.0053475935829, Blast_Score=123, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI25148291, Length=332, Percent_Identity=28.0120481927711, Blast_Score=115, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI25148203, Length=394, Percent_Identity=23.8578680203046, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI71982862, Length=194, Percent_Identity=28.3505154639175, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI25148205, Length=337, Percent_Identity=23.7388724035608, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=42.3913043478261, Blast_Score=79, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6324778, Length=347, Percent_Identity=35.7348703170029, Blast_Score=204, Evalue=5e-53,
Organism=Saccharomyces cerevisiae, GI6321360, Length=348, Percent_Identity=34.1954022988506, Blast_Score=202, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6325138, Length=360, Percent_Identity=33.8888888888889, Blast_Score=200, Evalue=6e-52,
Organism=Saccharomyces cerevisiae, GI6324217, Length=347, Percent_Identity=33.7175792507205, Blast_Score=199, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6321856, Length=336, Percent_Identity=36.0119047619048, Blast_Score=190, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6320224, Length=337, Percent_Identity=32.0474777448071, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6322912, Length=331, Percent_Identity=37.1601208459215, Blast_Score=187, Evalue=6e-48,
Organism=Saccharomyces cerevisiae, GI6322323, Length=331, Percent_Identity=37.1601208459215, Blast_Score=187, Evalue=6e-48,
Organism=Saccharomyces cerevisiae, GI6320041, Length=358, Percent_Identity=31.0055865921788, Blast_Score=183, Evalue=8e-47,
Organism=Saccharomyces cerevisiae, GI6323021, Length=423, Percent_Identity=30.0236406619385, Blast_Score=176, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6321963, Length=345, Percent_Identity=32.7536231884058, Blast_Score=165, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6322427, Length=345, Percent_Identity=29.8550724637681, Blast_Score=163, Evalue=8e-41,
Organism=Saccharomyces cerevisiae, GI6320449, Length=358, Percent_Identity=32.122905027933, Blast_Score=162, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6321111, Length=365, Percent_Identity=30.4109589041096, Blast_Score=155, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6323947, Length=340, Percent_Identity=32.0588235294118, Blast_Score=155, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6324620, Length=323, Percent_Identity=31.2693498452012, Blast_Score=154, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6319618, Length=399, Percent_Identity=27.3182957393484, Blast_Score=152, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6320119, Length=339, Percent_Identity=29.2035398230088, Blast_Score=149, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6319714, Length=394, Percent_Identity=27.6649746192893, Blast_Score=144, Evalue=4e-35,
Organism=Saccharomyces cerevisiae, GI6320400, Length=354, Percent_Identity=31.0734463276836, Blast_Score=141, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6322876, Length=455, Percent_Identity=26.8131868131868, Blast_Score=128, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6321267, Length=341, Percent_Identity=26.9794721407625, Blast_Score=117, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6323306, Length=378, Percent_Identity=24.0740740740741, Blast_Score=105, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6320173, Length=182, Percent_Identity=32.967032967033, Blast_Score=104, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6324366, Length=165, Percent_Identity=31.5151515151515, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24645031, Length=332, Percent_Identity=35.5421686746988, Blast_Score=208, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24642151, Length=341, Percent_Identity=34.8973607038123, Blast_Score=202, Evalue=8e-52,
Organism=Drosophila melanogaster, GI28574962, Length=352, Percent_Identity=33.2386363636364, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI24662330, Length=346, Percent_Identity=32.3699421965318, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI17985987, Length=364, Percent_Identity=34.6153846153846, Blast_Score=194, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24585582, Length=336, Percent_Identity=32.4404761904762, Blast_Score=191, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24584399, Length=337, Percent_Identity=32.3442136498516, Blast_Score=188, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24582080, Length=338, Percent_Identity=34.3195266272189, Blast_Score=185, Evalue=8e-47,
Organism=Drosophila melanogaster, GI24582078, Length=338, Percent_Identity=34.3195266272189, Blast_Score=185, Evalue=8e-47,
Organism=Drosophila melanogaster, GI17136248, Length=338, Percent_Identity=34.3195266272189, Blast_Score=185, Evalue=8e-47,
Organism=Drosophila melanogaster, GI24582075, Length=338, Percent_Identity=34.3195266272189, Blast_Score=185, Evalue=8e-47,
Organism=Drosophila melanogaster, GI24584994, Length=359, Percent_Identity=32.5905292479109, Blast_Score=185, Evalue=1e-46,
Organism=Drosophila melanogaster, GI17136814, Length=332, Percent_Identity=35.2409638554217, Blast_Score=184, Evalue=2e-46,
Organism=Drosophila melanogaster, GI18857967, Length=362, Percent_Identity=33.7016574585635, Blast_Score=184, Evalue=2e-46,
Organism=Drosophila melanogaster, GI21355075, Length=351, Percent_Identity=30.7692307692308, Blast_Score=184, Evalue=2e-46,
Organism=Drosophila melanogaster, GI17977678, Length=364, Percent_Identity=33.7912087912088, Blast_Score=181, Evalue=2e-45,
Organism=Drosophila melanogaster, GI21356161, Length=348, Percent_Identity=33.0459770114943, Blast_Score=178, Evalue=9e-45,
Organism=Drosophila melanogaster, GI28575014, Length=337, Percent_Identity=31.1572700296736, Blast_Score=175, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24644479, Length=351, Percent_Identity=33.9031339031339, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI281361218, Length=351, Percent_Identity=33.9031339031339, Blast_Score=173, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24644481, Length=351, Percent_Identity=33.9031339031339, Blast_Score=173, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24644483, Length=350, Percent_Identity=33.1428571428571, Blast_Score=173, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24644487, Length=350, Percent_Identity=33.1428571428571, Blast_Score=173, Evalue=3e-43,
Organism=Drosophila melanogaster, GI45551833, Length=350, Percent_Identity=33.1428571428571, Blast_Score=173, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24644485, Length=350, Percent_Identity=33.1428571428571, Blast_Score=173, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24583281, Length=358, Percent_Identity=28.4916201117318, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI24583279, Length=358, Percent_Identity=28.4916201117318, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI28571808, Length=352, Percent_Identity=31.5340909090909, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI28571809, Length=352, Percent_Identity=31.5340909090909, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI281365720, Length=298, Percent_Identity=33.5570469798658, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI18859659, Length=410, Percent_Identity=29.7560975609756, Blast_Score=153, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24581954, Length=338, Percent_Identity=29.2899408284024, Blast_Score=153, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24581952, Length=338, Percent_Identity=29.2899408284024, Blast_Score=153, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24581956, Length=338, Percent_Identity=29.2899408284024, Blast_Score=153, Evalue=4e-37,
Organism=Drosophila melanogaster, GI28571338, Length=410, Percent_Identity=29.7560975609756, Blast_Score=153, Evalue=4e-37,
Organism=Drosophila melanogaster, GI17647335, Length=425, Percent_Identity=28.2352941176471, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24642822, Length=358, Percent_Identity=28.4916201117318, Blast_Score=145, Evalue=1e-34,
Organism=Drosophila melanogaster, GI24666101, Length=344, Percent_Identity=31.1046511627907, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI20130173, Length=435, Percent_Identity=27.816091954023, Blast_Score=140, Evalue=4e-33,
Organism=Drosophila melanogaster, GI21355559, Length=348, Percent_Identity=30.7471264367816, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24668515, Length=328, Percent_Identity=27.1341463414634, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24643725, Length=366, Percent_Identity=25.1366120218579, Blast_Score=109, Evalue=7e-24,
Organism=Drosophila melanogaster, GI19920478, Length=369, Percent_Identity=24.9322493224932, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24640164, Length=331, Percent_Identity=21.4501510574018, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 69858; Mature: 69727

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERNYVNPTPVQLAVLAEDAEGRDLLVSAQTGSGKTVAYGLAMAANMLGEAERFGPAAA
CCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PLALIVAPTRELALQVQRELAWLYQHAGARVISCVGGMDPRREQRELEAGAHIVVGTPGR
CEEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHCCCEEEEECCHH
LCDHLRRGRLDISELKAVVLDEADEMLNLGFREDLEFILETTPETRRTLLFSATFPRGIV
HHHHHHHCCCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHCCCCHHHEEEEECCCCHHHH
ALAKQYQDDAFRIEVEGDEGGHADIEYRAIRIAPDDAEHAVVNLLRFYESPSAIVFCNTR
HHHHHCCCCEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCH
EAVRHLQAALLERGFSVVALSGELTQNERTMALQSLRDGRSRVCVATDVAARGIDLANLD
HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEHHHHCCCCEEEEE
LVIHAELPNDPEVMQHRSGRTGRAGRKGVSVLLVSPARRRRAEMLLKLAGIEAEWGAAPQ
EEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC
AEEIRKLDQERMLQDSVLTEESTAEDLALAQALLAERSPEDIAAALVRLYRARLPSPEDI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHH
LDPGEDRGRSRPDRAARERPSRGEERAPAPRTKGGKPSRHGMGEPSVWFRAAIGRRKNAE
CCCCHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
ARWLLPMICRRGGIDKQDIGAIKISDTTTEFEIAARVADSFTANIRRPDKEDTIRIEPLA
CHHHHHHHHHCCCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
AAPSAAARPDKPPRRKADEGSYHPLDRDEPRDRADDKPRGKPPRDHQPKSFREPAFAKKK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
KHRDKSSPGGQAFRSSNPHAKAPGGKKPKAKRRG
HHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AERNYVNPTPVQLAVLAEDAEGRDLLVSAQTGSGKTVAYGLAMAANMLGEAERFGPAAA
CCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PLALIVAPTRELALQVQRELAWLYQHAGARVISCVGGMDPRREQRELEAGAHIVVGTPGR
CEEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHCCCEEEEECCHH
LCDHLRRGRLDISELKAVVLDEADEMLNLGFREDLEFILETTPETRRTLLFSATFPRGIV
HHHHHHHCCCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHCCCCHHHEEEEECCCCHHHH
ALAKQYQDDAFRIEVEGDEGGHADIEYRAIRIAPDDAEHAVVNLLRFYESPSAIVFCNTR
HHHHHCCCCEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCH
EAVRHLQAALLERGFSVVALSGELTQNERTMALQSLRDGRSRVCVATDVAARGIDLANLD
HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEHHHHCCCCEEEEE
LVIHAELPNDPEVMQHRSGRTGRAGRKGVSVLLVSPARRRRAEMLLKLAGIEAEWGAAPQ
EEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC
AEEIRKLDQERMLQDSVLTEESTAEDLALAQALLAERSPEDIAAALVRLYRARLPSPEDI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHH
LDPGEDRGRSRPDRAARERPSRGEERAPAPRTKGGKPSRHGMGEPSVWFRAAIGRRKNAE
CCCCHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
ARWLLPMICRRGGIDKQDIGAIKISDTTTEFEIAARVADSFTANIRRPDKEDTIRIEPLA
CHHHHHHHHHCCCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
AAPSAAARPDKPPRRKADEGSYHPLDRDEPRDRADDKPRGKPPRDHQPKSFREPAFAKKK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
KHRDKSSPGGQAFRSSNPHAKAPGGKKPKAKRRG
HHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]