| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340212
Identifier: 146340212
GI number: 146340212
Start: 3431570
End: 3433654
Strand: Reverse
Name: 146340212
Synonym: BRADO3230
Alternate gene names: NA
Gene position: 3433654-3431570 (Counterclockwise)
Preceding gene: 146340213
Following gene: 146340211
Centisome position: 46.05
GC content: 68.3
Gene sequence:
>2085_bases ATGCTTGAAGGAGCCGAAGTCCGGCTGGCCGTCGATATCGGGGGCACATTCACCGATATCGTTCTCGACATCGGCGATCA CCGCCGCACACGCAAGGTGCTGACGACGCCGACTCAGCCGGAGCAGGCTGTGCTCGACGGCACACGTCTCATCCTGGCCG ATGCGAAGGCCCGCATCTCCGACATCGACGTCTTCATTCACGGCACCACGCTCGCGACCAACGCCATCATCGAGCGACGC GGCGCGAAGACGGCGCTGATCGCGACGTCAGGCTTCCGCGATGTTCTGGATATTGGAACTGAGAGCCGCTACGACCAGTA CGACCTCTCCATCGACAAGCCGAAGCCGCTGGTGCCGCGCAGCTTGCGCTTCACCGTTCCCGAGCGCGTCGATGCTCACG GCGACATCAGGCTGCCGCTCGACGAAGCGGCGGTGCGCGCACTGGTTCCGCAACTGCGCGCGCTCGAGGTCAGCAGCATC GCCATCGCCTTCCTGCACGCCTACGCCAATCCCGCGCATGAGCGTCGTGCCGGCGAGATCCTGGCCGATGTGATGCCAGG CGTATCGATCACGCTGTCGTCGGCCGTCTGTCCCGAAATCCGGGAATATGAGCGCACCTCGACCGCGGTCGCCAACGCCT ATGTGCAGCCGCTGATGGACTCCTATCTCGCCCGCATGGATCAGGCGCTGCGCGTCGAGCAGTTCCGCGGCGCGATCTAT CTCGTGACCTCCGGCGGCGGCGTCACCTCGATCGACACGGCGCGGCGTTTCCCGGTGCGCCTCGTCGAATCCGGTCCCGC CGGCGGCGCGATCTTCGCGGGCCAGATCGCCGCACGGCTCGGCGAACGCAAGGTGCTGTCGTTCGACATGGGCGGCACCA CCGCCAAGATCTGTCTCATCGAGGACTTCGAGCCCGAGAGCTCGCGCGTGTTCGAGGTCGATCGCGCCGCGCGCTTCCTC AAGGGCTCCGGCCTGCCGGTGCGCATCCCCGTCATCGAGATGGTCGAGATCGGCGCCGGCGGCGGCTCGATCGCGCGCAT CGATGCGATGAAGCGCGTCACCGTCGGCCCCGAAAGCGCCTCCTCTGAGCCGGGCCCGGCGTGCTATGGCCGCGGCGGCC AGCATCCGGCCGTGACCGATTCCGACGTCGCGCTCGGCATGATCGATCCCGACGCGTTTGCCGGCGGCACCATCAAGCTC GATCCCGAACTGTCGAAGCAGGCGCTGCTCCGCGACGTCGGCGCGCCGCTCGGCCTCAATGCCGAGACCGCGGCCTATGC GGTGCATGAGGTCGTCTGCGAGAACATGGCGAGCGCCGCGCGCGTCCACGCCGTCGAGCGCGGCGCTATCATCGGCCAGC ACACGCTGATTGCGTTCGGCGGTGCAGCGCCGCTGCATGCCGCGCGCGTCGCCGAGAAGATCGGTGTCGCCAAAGTGATC GTGCCGTCGAATGCCGGCGTCGGCTCAGCCGTCGGCTTCCTCGCGGCTCCCATTGCCTATGAGCTGGTCCGCAGCCGCCA CGCGCGGCTCGATACGTTCGACACCACGCTCGTCTCCGCCCTGCTACAGGAGATGGCGGACGAAGCCCGCGCCCTGGTCG AGCCGGGCGCAGCCGGTGCTCCGGTGCGCGAGCGCCGCTCCGCCTTCATGCGCTATGTCGGCCAGGGACACGAGATCAGC GTCGAGTTGCCCAACCGTGCCCTCACCGCGGACGACCTCCCTGCCCTGCGCAAGACCTTCGAGGCCGGCTATGCCGCGCT GTTCGAGCGCGCCATTCCGGGGGCCGCGATCGAGGTGCTGAGCTGGTCGGTGCTGGCGACGACGGACGCGCACCAGCCAG CCACCGTCGCTGAGGTCACGCGCAAGCCCGCCGGCGAGGCGTCGGGCCACCGCAAATTCTTCGACGGCCGCGCCGGCCGC TTCGTCGACATCCCGCTGTATCGCCGCGAGCAGATGGCGCCCGGCGCGGTCATCGCAGGTCCCGCCGTGATCGCCGAGGA CGAGACCTCGACCTTCATCTCCAACAGTTTCGACGCGCATATCGACGGTGCCGGCAGCATCGTCATGGAACGGAAGGCGG CCTAA
Upstream 100 bases:
>100_bases ACCGCACAAAACGCAGAGCAGCAACACGCATCACCTCTGGCGCAATGGCATGGGACTTGCTCAAATTGCACCTCAATTCG TTGCTTGCGGAGATGACTGA
Downstream 100 bases:
>100_bases CCATGAGCTCGCAAACCAGCCTGATCGACCTGCAGATCATGTGGCACCGGCTGATCGCCGTGGTCGAGGAGCAGGCGCAG GTGCTGCTGCGCACCGCCTT
Product: Hydantoin utilization protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 694; Mature: 694
Protein sequence:
>694_residues MLEGAEVRLAVDIGGTFTDIVLDIGDHRRTRKVLTTPTQPEQAVLDGTRLILADAKARISDIDVFIHGTTLATNAIIERR GAKTALIATSGFRDVLDIGTESRYDQYDLSIDKPKPLVPRSLRFTVPERVDAHGDIRLPLDEAAVRALVPQLRALEVSSI AIAFLHAYANPAHERRAGEILADVMPGVSITLSSAVCPEIREYERTSTAVANAYVQPLMDSYLARMDQALRVEQFRGAIY LVTSGGGVTSIDTARRFPVRLVESGPAGGAIFAGQIAARLGERKVLSFDMGGTTAKICLIEDFEPESSRVFEVDRAARFL KGSGLPVRIPVIEMVEIGAGGGSIARIDAMKRVTVGPESASSEPGPACYGRGGQHPAVTDSDVALGMIDPDAFAGGTIKL DPELSKQALLRDVGAPLGLNAETAAYAVHEVVCENMASAARVHAVERGAIIGQHTLIAFGGAAPLHAARVAEKIGVAKVI VPSNAGVGSAVGFLAAPIAYELVRSRHARLDTFDTTLVSALLQEMADEARALVEPGAAGAPVRERRSAFMRYVGQGHEIS VELPNRALTADDLPALRKTFEAGYAALFERAIPGAAIEVLSWSVLATTDAHQPATVAEVTRKPAGEASGHRKFFDGRAGR FVDIPLYRREQMAPGAVIAGPAVIAEDETSTFISNSFDAHIDGAGSIVMERKAA
Sequences:
>Translated_694_residues MLEGAEVRLAVDIGGTFTDIVLDIGDHRRTRKVLTTPTQPEQAVLDGTRLILADAKARISDIDVFIHGTTLATNAIIERR GAKTALIATSGFRDVLDIGTESRYDQYDLSIDKPKPLVPRSLRFTVPERVDAHGDIRLPLDEAAVRALVPQLRALEVSSI AIAFLHAYANPAHERRAGEILADVMPGVSITLSSAVCPEIREYERTSTAVANAYVQPLMDSYLARMDQALRVEQFRGAIY LVTSGGGVTSIDTARRFPVRLVESGPAGGAIFAGQIAARLGERKVLSFDMGGTTAKICLIEDFEPESSRVFEVDRAARFL KGSGLPVRIPVIEMVEIGAGGGSIARIDAMKRVTVGPESASSEPGPACYGRGGQHPAVTDSDVALGMIDPDAFAGGTIKL DPELSKQALLRDVGAPLGLNAETAAYAVHEVVCENMASAARVHAVERGAIIGQHTLIAFGGAAPLHAARVAEKIGVAKVI VPSNAGVGSAVGFLAAPIAYELVRSRHARLDTFDTTLVSALLQEMADEARALVEPGAAGAPVRERRSAFMRYVGQGHEIS VELPNRALTADDLPALRKTFEAGYAALFERAIPGAAIEVLSWSVLATTDAHQPATVAEVTRKPAGEASGHRKFFDGRAGR FVDIPLYRREQMAPGAVIAGPAVIAEDETSTFISNSFDAHIDGAGSIVMERKAA >Mature_694_residues MLEGAEVRLAVDIGGTFTDIVLDIGDHRRTRKVLTTPTQPEQAVLDGTRLILADAKARISDIDVFIHGTTLATNAIIERR GAKTALIATSGFRDVLDIGTESRYDQYDLSIDKPKPLVPRSLRFTVPERVDAHGDIRLPLDEAAVRALVPQLRALEVSSI AIAFLHAYANPAHERRAGEILADVMPGVSITLSSAVCPEIREYERTSTAVANAYVQPLMDSYLARMDQALRVEQFRGAIY LVTSGGGVTSIDTARRFPVRLVESGPAGGAIFAGQIAARLGERKVLSFDMGGTTAKICLIEDFEPESSRVFEVDRAARFL KGSGLPVRIPVIEMVEIGAGGGSIARIDAMKRVTVGPESASSEPGPACYGRGGQHPAVTDSDVALGMIDPDAFAGGTIKL DPELSKQALLRDVGAPLGLNAETAAYAVHEVVCENMASAARVHAVERGAIIGQHTLIAFGGAAPLHAARVAEKIGVAKVI VPSNAGVGSAVGFLAAPIAYELVRSRHARLDTFDTTLVSALLQEMADEARALVEPGAAGAPVRERRSAFMRYVGQGHEIS VELPNRALTADDLPALRKTFEAGYAALFERAIPGAAIEVLSWSVLATTDAHQPATVAEVTRKPAGEASGHRKFFDGRAGR FVDIPLYRREQMAPGAVIAGPAVIAEDETSTFISNSFDAHIDGAGSIVMERKAA
Specific function: Unknown
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=519, Percent_Identity=32.1772639691715, Blast_Score=195, Evalue=9e-50, Organism=Caenorhabditis elegans, GI133901900, Length=722, Percent_Identity=25.4847645429363, Blast_Score=165, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6322634, Length=777, Percent_Identity=27.7992277992278, Blast_Score=220, Evalue=5e-58, Organism=Drosophila melanogaster, GI45550492, Length=750, Percent_Identity=29.4666666666667, Blast_Score=224, Evalue=1e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: NA
Molecular weight: Translated: 73661; Mature: 73661
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEGAEVRLAVDIGGTFTDIVLDIGDHRRTRKVLTTPTQPEQAVLDGTRLILADAKARIS CCCCCEEEEEEEECCCEEEHEEECCCCCCCCCEECCCCCCHHHHHCCCEEEEECCCCCEE DIDVFIHGTTLATNAIIERRGAKTALIATSGFRDVLDIGTESRYDQYDLSIDKPKPLVPR EEEEEEECCHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC SLRFTVPERVDAHGDIRLPLDEAAVRALVPQLRALEVSSIAIAFLHAYANPAHERRAGEI CEEECCCHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LADVMPGVSITLSSAVCPEIREYERTSTAVANAYVQPLMDSYLARMDQALRVEQFRGAIY HHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE LVTSGGGVTSIDTARRFPVRLVESGPAGGAIFAGQIAARLGERKVLSFDMGGTTAKICLI EEECCCCEEECCHHHCCCEEEEECCCCCCEEHHHHHHHHCCCCEEEEEECCCCEEEEEEE EDFEPESSRVFEVDRAARFLKGSGLPVRIPVIEMVEIGAGGGSIARIDAMKRVTVGPESA ECCCCCCCCEEEHHHHHHHHCCCCCEEEECCEEEEEECCCCCCEEEEHHHHEEECCCCCC SSEPGPACYGRGGQHPAVTDSDVALGMIDPDAFAGGTIKLDPELSKQALLRDVGAPLGLN CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHCCCCCCC AETAAYAVHEVVCENMASAARVHAVERGAIIGQHTLIAFGGAAPLHAARVAEKIGVAKVI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCHHHHHHHHHHCCCEEEE VPSNAGVGSAVGFLAAPIAYELVRSRHARLDTFDTTLVSALLQEMADEARALVEPGAAGA EECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PVRERRSAFMRYVGQGHEISVELPNRALTADDLPALRKTFEAGYAALFERAIPGAAIEVL CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH SWSVLATTDAHQPATVAEVTRKPAGEASGHRKFFDGRAGRFVDIPLYRREQMAPGAVIAG EEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCEEEC PAVIAEDETSTFISNSFDAHIDGAGSIVMERKAA CEEEECCCCHHHHCCCCCCEECCCCCEEEECCCC >Mature Secondary Structure MLEGAEVRLAVDIGGTFTDIVLDIGDHRRTRKVLTTPTQPEQAVLDGTRLILADAKARIS CCCCCEEEEEEEECCCEEEHEEECCCCCCCCCEECCCCCCHHHHHCCCEEEEECCCCCEE DIDVFIHGTTLATNAIIERRGAKTALIATSGFRDVLDIGTESRYDQYDLSIDKPKPLVPR EEEEEEECCHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC SLRFTVPERVDAHGDIRLPLDEAAVRALVPQLRALEVSSIAIAFLHAYANPAHERRAGEI CEEECCCHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LADVMPGVSITLSSAVCPEIREYERTSTAVANAYVQPLMDSYLARMDQALRVEQFRGAIY HHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE LVTSGGGVTSIDTARRFPVRLVESGPAGGAIFAGQIAARLGERKVLSFDMGGTTAKICLI EEECCCCEEECCHHHCCCEEEEECCCCCCEEHHHHHHHHCCCCEEEEEECCCCEEEEEEE EDFEPESSRVFEVDRAARFLKGSGLPVRIPVIEMVEIGAGGGSIARIDAMKRVTVGPESA ECCCCCCCCEEEHHHHHHHHCCCCCEEEECCEEEEEECCCCCCEEEEHHHHEEECCCCCC SSEPGPACYGRGGQHPAVTDSDVALGMIDPDAFAGGTIKLDPELSKQALLRDVGAPLGLN CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHCCCCCCC AETAAYAVHEVVCENMASAARVHAVERGAIIGQHTLIAFGGAAPLHAARVAEKIGVAKVI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCHHHHHHHHHHCCCEEEE VPSNAGVGSAVGFLAAPIAYELVRSRHARLDTFDTTLVSALLQEMADEARALVEPGAAGA EECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PVRERRSAFMRYVGQGHEISVELPNRALTADDLPALRKTFEAGYAALFERAIPGAAIEVL CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH SWSVLATTDAHQPATVAEVTRKPAGEASGHRKFFDGRAGRFVDIPLYRREQMAPGAVIAG EEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCEEEC PAVIAEDETSTFISNSFDAHIDGAGSIVMERKAA CEEEECCCCHHHHCCCCCCEECCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]