| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340211
Identifier: 146340211
GI number: 146340211
Start: 3429915
End: 3431567
Strand: Reverse
Name: 146340211
Synonym: BRADO3229
Alternate gene names: NA
Gene position: 3431567-3429915 (Counterclockwise)
Preceding gene: 146340212
Following gene: 146340210
Centisome position: 46.02
GC content: 67.82
Gene sequence:
>1653_bases ATGAGCTCGCAAACCAGCCTGATCGACCTGCAGATCATGTGGCACCGGCTGATCGCCGTGGTCGAGGAGCAGGCGCAGGT GCTGCTGCGCACCGCCTTCAGCCCGATCGTGCGGGAATGCGGCGACCTCTCAGCCGGCGTGTTCGACCTGAAGGGCCGCA TGCTGGCGCAGGCGGTTACCGGCACGCCGGGCCACGTCAACTCGATGGCGGAGTCGGTGAAGCACTTCATCGCGCATTTC CCGCTTCAGACGATGAAGCCCGGCGATGCCTACATCACCAACGATCCCTGGATGGGCACCGGCCATCTCAACGACTTCGT CGTGACCACGCCATGCTTCAAGGACGGCAAGCCGGTCGCTTTGTTCTCCTGCACCAGCCATCTGATGGACATCGGCGGCA TTGGCTTCGGCCCTGATGGCACCGACGTGTTCATGGAGGGCCTTTACATCCCGATGCTGAAGCTGATCGACCAGGGCGTC GTCAACGAAACCTTGATGGCTGTCATCCGCGCCAACACGCGGCTGCCGGTCGACACCGAAGGCGACACCTACTCGCTCGC CGCCTGCAACGACGTCGGCTGCCAGCGCCTGGTCGAGATGATGACGGAGTTCGGCATCGCCTCGCTCGACGAACTCGGCG ACTATGTCTGCGACCGCTCGCGCGAGGCGGTGCTGGCCGAGATCGCCAAGCTGCCGAAGGGCACCTTCCGCAACGAGATG GTGGTCGACGGCTATGATGCGCCGGTAACGCTCAAGGCCGCGCTGACGATCAGCGATGCCGGCATTCACGTCGATTTCGA CGGCACGTCGACGGCCTCGAAGTTCGGCATCAACGTGCCGCTGTCCTACACGACAGCCTACACCGTGTTCGGCCTCGGCT GCGTGGTGGCGTCCGCGATTCCCAACAATGCCGGCTCGCTGTCGCCGCTGACGGTCTCCGCGCCTTCGGGCGCGATCCTC AACGCGCCAAAGCCCGCGCCGGTCGCCTCGCGCCACGTCATCGGCCAGATGCTGCCCGACGTCGTGTTCGGTTGCCTGCG CCAGATCATTCCGGAGCGCGTGCCCGCCGAAGGCACCTCCTGCCTGTGGAATCTCAACGTCCGCGGCCAGACCCGCTCCG GCGCCGGCGGCAATTACGGGTTCTCGATGGCGGTGACGTCGAACGGCGGCACCGGCGCGCGTTTCGACAAGGACGGGCTG TCGGCGACGGCCTATCCGTCCGGCGTGCGCGGCACGCCTGTCGAGATCGCCGAGACGCAGACGCCGCTGATCTTCTGGCG CAAGGAGCTGCGGCCGGATTCAGGCGGCGCCGGCCGCACCCGCGGCGGCCTCGGCCAGATCATCGAGGTCGGCAGCGGCG TCGACGCGCCGTTCGACATCCTCGCCGCCTTCGACCGCATCGACCACCCGCCCCGCGGCCGCGACGGCGGCCACAATGGC GAGGCCGGCTATGTCGGGCTCGCCTCGGGCAAGAAGCTGCGCGGCAAGGGCTTCCAGACCGTGCCGCCGGACGACCGGCT GGTGGTGCTGACACCGGGCGGCGCCGGCATCGGCGATCCGCGCGAGCGCGCGGCAGCGCTGGTGCAAGGCGATGTCGAGA GCGGGCTGGTGTCGGCGGAGAACGCGGCAGCGGTCTACGGTCGAGCACGATGA
Upstream 100 bases:
>100_bases TGATCGCCGAGGACGAGACCTCGACCTTCATCTCCAACAGTTTCGACGCGCATATCGACGGTGCCGGCAGCATCGTCATG GAACGGAAGGCGGCCTAACC
Downstream 100 bases:
>100_bases TGAACGATCGTATGAGACGGCAGCTGAGGCCTCGCCCCGTTTGGGGCATCGCTCTCGCCGCACGCGCGGTGCACCCTCTC CCCTTGTGGGAGAGGGTGGC
Product: Hydantoin utilization protein B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MSSQTSLIDLQIMWHRLIAVVEEQAQVLLRTAFSPIVRECGDLSAGVFDLKGRMLAQAVTGTPGHVNSMAESVKHFIAHF PLQTMKPGDAYITNDPWMGTGHLNDFVVTTPCFKDGKPVALFSCTSHLMDIGGIGFGPDGTDVFMEGLYIPMLKLIDQGV VNETLMAVIRANTRLPVDTEGDTYSLAACNDVGCQRLVEMMTEFGIASLDELGDYVCDRSREAVLAEIAKLPKGTFRNEM VVDGYDAPVTLKAALTISDAGIHVDFDGTSTASKFGINVPLSYTTAYTVFGLGCVVASAIPNNAGSLSPLTVSAPSGAIL NAPKPAPVASRHVIGQMLPDVVFGCLRQIIPERVPAEGTSCLWNLNVRGQTRSGAGGNYGFSMAVTSNGGTGARFDKDGL SATAYPSGVRGTPVEIAETQTPLIFWRKELRPDSGGAGRTRGGLGQIIEVGSGVDAPFDILAAFDRIDHPPRGRDGGHNG EAGYVGLASGKKLRGKGFQTVPPDDRLVVLTPGGAGIGDPRERAAALVQGDVESGLVSAENAAAVYGRAR
Sequences:
>Translated_550_residues MSSQTSLIDLQIMWHRLIAVVEEQAQVLLRTAFSPIVRECGDLSAGVFDLKGRMLAQAVTGTPGHVNSMAESVKHFIAHF PLQTMKPGDAYITNDPWMGTGHLNDFVVTTPCFKDGKPVALFSCTSHLMDIGGIGFGPDGTDVFMEGLYIPMLKLIDQGV VNETLMAVIRANTRLPVDTEGDTYSLAACNDVGCQRLVEMMTEFGIASLDELGDYVCDRSREAVLAEIAKLPKGTFRNEM VVDGYDAPVTLKAALTISDAGIHVDFDGTSTASKFGINVPLSYTTAYTVFGLGCVVASAIPNNAGSLSPLTVSAPSGAIL NAPKPAPVASRHVIGQMLPDVVFGCLRQIIPERVPAEGTSCLWNLNVRGQTRSGAGGNYGFSMAVTSNGGTGARFDKDGL SATAYPSGVRGTPVEIAETQTPLIFWRKELRPDSGGAGRTRGGLGQIIEVGSGVDAPFDILAAFDRIDHPPRGRDGGHNG EAGYVGLASGKKLRGKGFQTVPPDDRLVVLTPGGAGIGDPRERAAALVQGDVESGLVSAENAAAVYGRAR >Mature_549_residues SSQTSLIDLQIMWHRLIAVVEEQAQVLLRTAFSPIVRECGDLSAGVFDLKGRMLAQAVTGTPGHVNSMAESVKHFIAHFP LQTMKPGDAYITNDPWMGTGHLNDFVVTTPCFKDGKPVALFSCTSHLMDIGGIGFGPDGTDVFMEGLYIPMLKLIDQGVV NETLMAVIRANTRLPVDTEGDTYSLAACNDVGCQRLVEMMTEFGIASLDELGDYVCDRSREAVLAEIAKLPKGTFRNEMV VDGYDAPVTLKAALTISDAGIHVDFDGTSTASKFGINVPLSYTTAYTVFGLGCVVASAIPNNAGSLSPLTVSAPSGAILN APKPAPVASRHVIGQMLPDVVFGCLRQIIPERVPAEGTSCLWNLNVRGQTRSGAGGNYGFSMAVTSNGGTGARFDKDGLS ATAYPSGVRGTPVEIAETQTPLIFWRKELRPDSGGAGRTRGGLGQIIEVGSGVDAPFDILAAFDRIDHPPRGRDGGHNGE AGYVGLASGKKLRGKGFQTVPPDDRLVVLTPGGAGIGDPRERAAALVQGDVESGLVSAENAAAVYGRAR
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=551, Percent_Identity=30.4900181488203, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI133901900, Length=547, Percent_Identity=27.7879341864717, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI133901902, Length=506, Percent_Identity=27.6679841897233, Blast_Score=145, Evalue=6e-35, Organism=Saccharomyces cerevisiae, GI6322634, Length=555, Percent_Identity=27.5675675675676, Blast_Score=149, Evalue=1e-36, Organism=Drosophila melanogaster, GI45550492, Length=540, Percent_Identity=26.8518518518519, Blast_Score=139, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: NA
Molecular weight: Translated: 57911; Mature: 57779
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQTSLIDLQIMWHRLIAVVEEQAQVLLRTAFSPIVRECGDLSAGVFDLKGRMLAQAVT CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC GTPGHVNSMAESVKHFIAHFPLQTMKPGDAYITNDPWMGTGHLNDFVVTTPCFKDGKPVA CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCEE LFSCTSHLMDIGGIGFGPDGTDVFMEGLYIPMLKLIDQGVVNETLMAVIRANTRLPVDTE EEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC GDTYSLAACNDVGCQRLVEMMTEFGIASLDELGDYVCDRSREAVLAEIAKLPKGTFRNEM CCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCE VVDGYDAPVTLKAALTISDAGIHVDFDGTSTASKFGINVPLSYTTAYTVFGLGCVVASAI EEECCCCCEEEEEEEEEECCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHC PNNAGSLSPLTVSAPSGAILNAPKPAPVASRHVIGQMLPDVVFGCLRQIIPERVPAEGTS CCCCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC CLWNLNVRGQTRSGAGGNYGFSMAVTSNGGTGARFDKDGLSATAYPSGVRGTPVEIAETQ EEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC TPLIFWRKELRPDSGGAGRTRGGLGQIIEVGSGVDAPFDILAAFDRIDHPPRGRDGGHNG CCEEEEHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC EAGYVGLASGKKLRGKGFQTVPPDDRLVVLTPGGAGIGDPRERAAALVQGDVESGLVSAE CCCEEECCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHHCCEECC NAAAVYGRAR CCCEECCCCC >Mature Secondary Structure SSQTSLIDLQIMWHRLIAVVEEQAQVLLRTAFSPIVRECGDLSAGVFDLKGRMLAQAVT CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC GTPGHVNSMAESVKHFIAHFPLQTMKPGDAYITNDPWMGTGHLNDFVVTTPCFKDGKPVA CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCEE LFSCTSHLMDIGGIGFGPDGTDVFMEGLYIPMLKLIDQGVVNETLMAVIRANTRLPVDTE EEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC GDTYSLAACNDVGCQRLVEMMTEFGIASLDELGDYVCDRSREAVLAEIAKLPKGTFRNEM CCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCE VVDGYDAPVTLKAALTISDAGIHVDFDGTSTASKFGINVPLSYTTAYTVFGLGCVVASAI EEECCCCCEEEEEEEEEECCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHC PNNAGSLSPLTVSAPSGAILNAPKPAPVASRHVIGQMLPDVVFGCLRQIIPERVPAEGTS CCCCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC CLWNLNVRGQTRSGAGGNYGFSMAVTSNGGTGARFDKDGLSATAYPSGVRGTPVEIAETQ EEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC TPLIFWRKELRPDSGGAGRTRGGLGQIIEVGSGVDAPFDILAAFDRIDHPPRGRDGGHNG CCEEEEHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC EAGYVGLASGKKLRGKGFQTVPPDDRLVVLTPGGAGIGDPRERAAALVQGDVESGLVSAE CCCEEECCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHHCCEECC NAAAVYGRAR CCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]