| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340112
Identifier: 146340112
GI number: 146340112
Start: 3323460
End: 3324596
Strand: Direct
Name: 146340112
Synonym: BRADO3127
Alternate gene names: NA
Gene position: 3323460-3324596 (Clockwise)
Preceding gene: 146340111
Following gene: 146340113
Centisome position: 44.57
GC content: 67.72
Gene sequence:
>1137_bases ATGACGTACATCACCGGCACCGGTCTCACCTCGTTCGGCCGCCATGACGGCCGTTCCTCGCTCGATCTCATGAGCGTGGC GGCGCAGCTTGCGCTCGACGACGCCGAACTGACGCGCCGCGACATCGACGGCATCCTCTGCGGCTACTCCACCGTATCGC CGCACATCATGCTCGCGACCGTGTTCGCCGAACATTTCGGCATCACGCCATCCTATGCCCATGCCGTGCAGGTCGGCGGC GCCACCGGGCTCGCTATGGTGATGCTCGCACATCACCTCGTCGAGGCCGGCGTGGTCAGACACATGCTCGTCGTCGCCGG CGAGAACCGCCTGACCGGGCAGAGCCGCGACGCCTCGATCCAGGCCCTGGCGCAGGTCGGCAATCCCGACTACGAACTGC CGCTGGGACCGACGATCCCCGCTTATTACGGTCTCGTCGCCTCGCGCTACATGCACGAGCATGGCGTGACCGAACAGGAT CTCGCCGAGTTCGCCGTGCTGATGCGCAGGCATGCGCACGATCATCCCGGGGCCCAATTTCACGAGCGCATCACGGTCGC CGACGTCATGGCCTCCAAGCCGGTGGCGAAGCCATTGAAGCTGCTCGACTGCTGCCCGGTCTCCGACGGCGGCGCTGCGA TCATCGTCAGCCGCGAGCCGACCGCGGGGACCGCGGTGCGGGTGCGCGGCTGCGCCCAGGCCCATACCCACCAGCACGTA ACCGCGGCGCCGGCTCTGAGCGGGCTCGGCGCCGAGATCGCGATCAGGCAGGCAAAGGCGGCCGCCAGCGTTGCGATCTC CGACGTCCGCTATGCGGCGGTTTATGACAGCTTCACCATCACGCTCTGCATGCTGCTCGAAGACCTCGGCCTCGCGGGTC GAGGGGAAGCGGCGGCGCAAGTGCGGGACGGCCATTTCAGCCGGGATGGCGCGGTACCCCTCAACACCCATGGCGGCCTG TTGAGCTACGGCCATTGTGGTGTCGGCGGCGCGATGGCGCATCTCAACGAGGCACATCTGCAGATGACGGGGCGGGCCGG AGCCCGTCAGGTGCGCGATGCCGCGCTGACGCTGCTGCATGGCGACGGCGGCGTGCTGTCCTCGCATGTCAGCATGTTCT GGGAGCGGGAGCGATGA
Upstream 100 bases:
>100_bases CCCGGAATCTCGAGATTGTTGTGCTCCATCATCCCACACCTCGAGATTTCCGGTTCATCGCTGCGCGACGCCCCGGAATG ACGGCGAAGGGTGTAGTGCC
Downstream 100 bases:
>100_bases ACGAATCAGCCGACTGGACGAAGGGCGCCGCGGCGACCGGCTATCAACGCTGCGCGTGCTGCGCCCATGTGCAGTACTTC AGGCGCGATTTCTGCGCGGC
Product: putative thiolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTYITGTGLTSFGRHDGRSSLDLMSVAAQLALDDAELTRRDIDGILCGYSTVSPHIMLATVFAEHFGITPSYAHAVQVGG ATGLAMVMLAHHLVEAGVVRHMLVVAGENRLTGQSRDASIQALAQVGNPDYELPLGPTIPAYYGLVASRYMHEHGVTEQD LAEFAVLMRRHAHDHPGAQFHERITVADVMASKPVAKPLKLLDCCPVSDGGAAIIVSREPTAGTAVRVRGCAQAHTHQHV TAAPALSGLGAEIAIRQAKAAASVAISDVRYAAVYDSFTITLCMLLEDLGLAGRGEAAAQVRDGHFSRDGAVPLNTHGGL LSYGHCGVGGAMAHLNEAHLQMTGRAGARQVRDAALTLLHGDGGVLSSHVSMFWERER
Sequences:
>Translated_378_residues MTYITGTGLTSFGRHDGRSSLDLMSVAAQLALDDAELTRRDIDGILCGYSTVSPHIMLATVFAEHFGITPSYAHAVQVGG ATGLAMVMLAHHLVEAGVVRHMLVVAGENRLTGQSRDASIQALAQVGNPDYELPLGPTIPAYYGLVASRYMHEHGVTEQD LAEFAVLMRRHAHDHPGAQFHERITVADVMASKPVAKPLKLLDCCPVSDGGAAIIVSREPTAGTAVRVRGCAQAHTHQHV TAAPALSGLGAEIAIRQAKAAASVAISDVRYAAVYDSFTITLCMLLEDLGLAGRGEAAAQVRDGHFSRDGAVPLNTHGGL LSYGHCGVGGAMAHLNEAHLQMTGRAGARQVRDAALTLLHGDGGVLSSHVSMFWERER >Mature_377_residues TYITGTGLTSFGRHDGRSSLDLMSVAAQLALDDAELTRRDIDGILCGYSTVSPHIMLATVFAEHFGITPSYAHAVQVGGA TGLAMVMLAHHLVEAGVVRHMLVVAGENRLTGQSRDASIQALAQVGNPDYELPLGPTIPAYYGLVASRYMHEHGVTEQDL AEFAVLMRRHAHDHPGAQFHERITVADVMASKPVAKPLKLLDCCPVSDGGAAIIVSREPTAGTAVRVRGCAQAHTHQHVT AAPALSGLGAEIAIRQAKAAASVAISDVRYAAVYDSFTITLCMLLEDLGLAGRGEAAAQVRDGHFSRDGAVPLNTHGGLL SYGHCGVGGAMAHLNEAHLQMTGRAGARQVRDAALTLLHGDGGVLSSHVSMFWERER
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923233, Length=386, Percent_Identity=25.3886010362694, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI302344760, Length=305, Percent_Identity=25.9016393442623, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI302344767, Length=305, Percent_Identity=25.9016393442623, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI302344762, Length=380, Percent_Identity=24.2105263157895, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI55956775, Length=342, Percent_Identity=23.3918128654971, Blast_Score=76, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17537653, Length=386, Percent_Identity=24.0932642487047, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI19921506, Length=385, Percent_Identity=25.974025974026, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI24585051, Length=385, Percent_Identity=25.974025974026, Blast_Score=102, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 39894; Mature: 39763
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYITGTGLTSFGRHDGRSSLDLMSVAAQLALDDAELTRRDIDGILCGYSTVSPHIMLAT CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCEEEECCCCCCCHHHHHH VFAEHFGITPSYAHAVQVGGATGLAMVMLAHHLVEAGVVRHMLVVAGENRLTGQSRDASI HHHHHHCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHH QALAQVGNPDYELPLGPTIPAYYGLVASRYMHEHGVTEQDLAEFAVLMRRHAHDHPGAQF HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHH HERITVADVMASKPVAKPLKLLDCCPVSDGGAAIIVSREPTAGTAVRVRGCAQAHTHQHV HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEECHHHHHCCCCH TAAPALSGLGAEIAIRQAKAAASVAISDVRYAAVYDSFTITLCMLLEDLGLAGRGEAAAQ HHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHH VRDGHFSRDGAVPLNTHGGLLSYGHCGVGGAMAHLNEAHLQMTGRAGARQVRDAALTLLH HCCCCCCCCCCCEECCCCCEEECCCCCCCHHHHHCCHHHEEECCCHHHHHHHHHHEEEEE GDGGVLSSHVSMFWERER CCCCHHHHHHHHHHCCCC >Mature Secondary Structure TYITGTGLTSFGRHDGRSSLDLMSVAAQLALDDAELTRRDIDGILCGYSTVSPHIMLAT CEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCEEEECCCCCCCHHHHHH VFAEHFGITPSYAHAVQVGGATGLAMVMLAHHLVEAGVVRHMLVVAGENRLTGQSRDASI HHHHHHCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHH QALAQVGNPDYELPLGPTIPAYYGLVASRYMHEHGVTEQDLAEFAVLMRRHAHDHPGAQF HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHH HERITVADVMASKPVAKPLKLLDCCPVSDGGAAIIVSREPTAGTAVRVRGCAQAHTHQHV HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEECHHHHHCCCCH TAAPALSGLGAEIAIRQAKAAASVAISDVRYAAVYDSFTITLCMLLEDLGLAGRGEAAAQ HHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHH VRDGHFSRDGAVPLNTHGGLLSYGHCGVGGAMAHLNEAHLQMTGRAGARQVRDAALTLLH HCCCCCCCCCCCEECCCCCEEECCCCCCCHHHHHCCHHHEEECCCHHHHHHHHHHEEEEE GDGGVLSSHVSMFWERER CCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]