| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339988
Identifier: 146339988
GI number: 146339988
Start: 3195386
End: 3196957
Strand: Direct
Name: 146339988
Synonym: BRADO2993
Alternate gene names: NA
Gene position: 3195386-3196957 (Clockwise)
Preceding gene: 146339982
Following gene: 146339991
Centisome position: 42.85
GC content: 66.67
Gene sequence:
>1572_bases ATGCCAGGTTTGACGTCCTCCATCGTGCGGCCAAGCCTGCTGGCCATCGCGCTGACCCTCCTGGGCGCCGGCCCGGCTCT GCGCGCCCAGGACGCGCCGCCCGCCGCGCAGGAGAACGCTGCTGCCTCCGGTCCTCGCGGCGGTTCGGCCGGCACGCGCG TCGCCAGTGCCCCTGCTTCCCCGTCGGCAGCGGAGCAGCACAAGCTGCCGGCCGATTCGACCACCACACAGACGGTCGAT TTGCCCGGGCGCACGCTGACCTTCACAGCGACGGCTGGCTCAATTCGTCTGTTCGACGACAAGGGCGAGCCGCAGGCCGA CATCGCCTACACCTCGTACCAGCTCAACGGCACCGAGCGAGGTAGCCGTCCGGTGACGTTCTTCTTGAATGGCGGCCCCG GAGCGTCATCGGCCTATCTGCAACTCGGTAACGCCGGGCCGTGGCGGATCGGTATCGATGCGGCGAGCGTCACGCCGTCG TCGAAGCCGGAGCTGACACCCAATGCCGACACCTGGCTCGACTTCACCGACCTCGTCTTCATCGATCCCGTCGGCACCGG CTACAGCCGCTTCGTCGCGACGGGCGACGAAGTCCGCAAGCGCTTCTTCTCGGTCGATGGCGATGTGCGCTCATTGTCGC AGGTGATGCGCCGCTGGCTGGAGAAGCACGACCGGCTGGCCTCGCCGAAGTTCATCACAGCGGAAAGCTATGGCGGCATC CGCGGGCCGAAGATCGTGCGTAACCTGCAGCAGGACCAGGGCGTCGGCATCAATGGCCTGATCCTGCTGTCGCCGCTGCT GGACTTCCGCGACTATTCCGGCTCGAGCCTGCTGCAGTATGTTGCAAGCCTGCCGAGCTACGCCGCCGTCGCCAGGCAGA TGAAAGGACCGGTGACACGGGCCGATCTCGCCGAGGTCGAACGCTACGCCAGCGGCGACTTCCTGCTCGATCTCGTGAAG GGCGAGGCCGACACCGAGGCGACCAACCGCCTCGCCGACCAAGTTGCGGCGCTGACCGGAATCGACCAGGCCGTCAGCCG CAGGCTCGCCGGCCGCTTCGACGACTCGGAGTTTCGTCGCGAGTTCGATCGCAAGAACGGCCGAGTCACCGGCCGCTATG ATGGCTCGGTGCTCGGCATCGATCCGTTTCCCGATTCCAGCCGATCGCGCAGCTCCGATCCCTCCGGCGACGTGCTCACC GCGCCGCTGACCGGCGCGGCGGTCGAGCTGACGACGCGCAAGCTCAACTGGCGCCCGGACGGCTCCTATGAGCTCTTGAG CGGAGCGGTGAATCAATCCTGGGATTTTGGCCGCGGCATCAGCCCGCCGGAATCGAGCAGCGACATCCGGCAGATCCTCG CGCTCGACCCTAAGCTCAAGCTGCTGGTGGGTCACGGCCTGTTCGATCTCGCCACACCTTATTACGGCTCGAAGATCGTG CTCGACCAACTGCCGGCCTTCGCCCAGCCGCCGCGCGTCAAGCTCGTGGTCTATCCGGGCGGACATATGTTCTATTCGCG CGACGACGCGCGAAAGGCGTTCCGCGGCGAGGCCGAGGCGCTGATGAAATAA
Upstream 100 bases:
>100_bases GATGAAGATCACGGAAGAGTTGGTTGAGGTTGGTCCCAAGCCGCGCTTCATGCGTTGCAGAAGGTGGCAAGATGCCGCCC GGTGGCCAGGGAGTGAATTG
Downstream 100 bases:
>100_bases TTCGTAGCCCGGATGAGCGCAGCGACATCCGGGTTCACACGCGCGGTCTCGGAGAACCCGGGTATCGCTGCGCTCACCCG GGCTACGGGTTCATGCGTCC
Product: putative peptidase S10, serine carboxypeptidase signal peptide
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MPGLTSSIVRPSLLAIALTLLGAGPALRAQDAPPAAQENAAASGPRGGSAGTRVASAPASPSAAEQHKLPADSTTTQTVD LPGRTLTFTATAGSIRLFDDKGEPQADIAYTSYQLNGTERGSRPVTFFLNGGPGASSAYLQLGNAGPWRIGIDAASVTPS SKPELTPNADTWLDFTDLVFIDPVGTGYSRFVATGDEVRKRFFSVDGDVRSLSQVMRRWLEKHDRLASPKFITAESYGGI RGPKIVRNLQQDQGVGINGLILLSPLLDFRDYSGSSLLQYVASLPSYAAVARQMKGPVTRADLAEVERYASGDFLLDLVK GEADTEATNRLADQVAALTGIDQAVSRRLAGRFDDSEFRREFDRKNGRVTGRYDGSVLGIDPFPDSSRSRSSDPSGDVLT APLTGAAVELTTRKLNWRPDGSYELLSGAVNQSWDFGRGISPPESSSDIRQILALDPKLKLLVGHGLFDLATPYYGSKIV LDQLPAFAQPPRVKLVVYPGGHMFYSRDDARKAFRGEAEALMK
Sequences:
>Translated_523_residues MPGLTSSIVRPSLLAIALTLLGAGPALRAQDAPPAAQENAAASGPRGGSAGTRVASAPASPSAAEQHKLPADSTTTQTVD LPGRTLTFTATAGSIRLFDDKGEPQADIAYTSYQLNGTERGSRPVTFFLNGGPGASSAYLQLGNAGPWRIGIDAASVTPS SKPELTPNADTWLDFTDLVFIDPVGTGYSRFVATGDEVRKRFFSVDGDVRSLSQVMRRWLEKHDRLASPKFITAESYGGI RGPKIVRNLQQDQGVGINGLILLSPLLDFRDYSGSSLLQYVASLPSYAAVARQMKGPVTRADLAEVERYASGDFLLDLVK GEADTEATNRLADQVAALTGIDQAVSRRLAGRFDDSEFRREFDRKNGRVTGRYDGSVLGIDPFPDSSRSRSSDPSGDVLT APLTGAAVELTTRKLNWRPDGSYELLSGAVNQSWDFGRGISPPESSSDIRQILALDPKLKLLVGHGLFDLATPYYGSKIV LDQLPAFAQPPRVKLVVYPGGHMFYSRDDARKAFRGEAEALMK >Mature_522_residues PGLTSSIVRPSLLAIALTLLGAGPALRAQDAPPAAQENAAASGPRGGSAGTRVASAPASPSAAEQHKLPADSTTTQTVDL PGRTLTFTATAGSIRLFDDKGEPQADIAYTSYQLNGTERGSRPVTFFLNGGPGASSAYLQLGNAGPWRIGIDAASVTPSS KPELTPNADTWLDFTDLVFIDPVGTGYSRFVATGDEVRKRFFSVDGDVRSLSQVMRRWLEKHDRLASPKFITAESYGGIR GPKIVRNLQQDQGVGINGLILLSPLLDFRDYSGSSLLQYVASLPSYAAVARQMKGPVTRADLAEVERYASGDFLLDLVKG EADTEATNRLADQVAALTGIDQAVSRRLAGRFDDSEFRREFDRKNGRVTGRYDGSVLGIDPFPDSSRSRSSDPSGDVLTA PLTGAAVELTTRKLNWRPDGSYELLSGAVNQSWDFGRGISPPESSSDIRQILALDPKLKLLVGHGLFDLATPYYGSKIVL DQLPAFAQPPRVKLVVYPGGHMFYSRDDARKAFRGEAEALMK
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56069; Mature: 55938
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS00131 CARBOXYPEPT_SER_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGLTSSIVRPSLLAIALTLLGAGPALRAQDAPPAAQENAAASGPRGGSAGTRVASAPAS CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC PSAAEQHKLPADSTTTQTVDLPGRTLTFTATAGSIRLFDDKGEPQADIAYTSYQLNGTER CCCHHHHCCCCCCCCCEEEECCCCEEEEEEECCEEEEECCCCCCCCCEEEEEEEECCCCC GSRPVTFFLNGGPGASSAYLQLGNAGPWRIGIDAASVTPSSKPELTPNADTWLDFTDLVF CCCCEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE IDPVGTGYSRFVATGDEVRKRFFSVDGDVRSLSQVMRRWLEKHDRLASPKFITAESYGGI ECCCCCCHHHHEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC RGPKIVRNLQQDQGVGINGLILLSPLLDFRDYSGSSLLQYVASLPSYAAVARQMKGPVTR CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCH ADLAEVERYASGDFLLDLVKGEADTEATNRLADQVAALTGIDQAVSRRLAGRFDDSEFRR HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH EFDRKNGRVTGRYDGSVLGIDPFPDSSRSRSSDPSGDVLTAPLTGAAVELTTRKLNWRPD HHHHCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCC GSYELLSGAVNQSWDFGRGISPPESSSDIRQILALDPKLKLLVGHGLFDLATPYYGSKIV CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCCEEH LDQLPAFAQPPRVKLVVYPGGHMFYSRDDARKAFRGEAEALMK HHHCCCCCCCCCEEEEEECCCCEEECCHHHHHHHCCHHHHHCC >Mature Secondary Structure PGLTSSIVRPSLLAIALTLLGAGPALRAQDAPPAAQENAAASGPRGGSAGTRVASAPAS CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC PSAAEQHKLPADSTTTQTVDLPGRTLTFTATAGSIRLFDDKGEPQADIAYTSYQLNGTER CCCHHHHCCCCCCCCCEEEECCCCEEEEEEECCEEEEECCCCCCCCCEEEEEEEECCCCC GSRPVTFFLNGGPGASSAYLQLGNAGPWRIGIDAASVTPSSKPELTPNADTWLDFTDLVF CCCCEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE IDPVGTGYSRFVATGDEVRKRFFSVDGDVRSLSQVMRRWLEKHDRLASPKFITAESYGGI ECCCCCCHHHHEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC RGPKIVRNLQQDQGVGINGLILLSPLLDFRDYSGSSLLQYVASLPSYAAVARQMKGPVTR CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCH ADLAEVERYASGDFLLDLVKGEADTEATNRLADQVAALTGIDQAVSRRLAGRFDDSEFRR HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH EFDRKNGRVTGRYDGSVLGIDPFPDSSRSRSSDPSGDVLTAPLTGAAVELTTRKLNWRPD HHHHCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCC GSYELLSGAVNQSWDFGRGISPPESSSDIRQILALDPKLKLLVGHGLFDLATPYYGSKIV CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCCEEH LDQLPAFAQPPRVKLVVYPGGHMFYSRDDARKAFRGEAEALMK HHHCCCCCCCCCEEEEEECCCCEEECCHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA