| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339982
Identifier: 146339982
GI number: 146339982
Start: 3188341
End: 3189516
Strand: Direct
Name: 146339982
Synonym: BRADO2987
Alternate gene names: NA
Gene position: 3188341-3189516 (Clockwise)
Preceding gene: 146339981
Following gene: 146339988
Centisome position: 42.76
GC content: 69.98
Gene sequence:
>1176_bases ATGATCGTTCGGCAGTTTCTCAGTTGGGTCAGAACCGCACCCGCCGGTGAGCGGGCAGAGGCCACCAGGGCTCTCGCGCG GGCGTGGCTGGTGTCGGATCTCGGCGAGGAGGATCGCTTCGCCGCAGAGGGCGCGCTCCTCATGCTGCTGGATGATCCGT CGCCGCTGGTGCGGCAGGCCATGGCGGAGGTGTTCGCGCGCAGCGAGGATGCCCCGGCCGCCATCGTCCAGGCGCTCGCC ACCGACCAGGCCTCCGTGGCCGCCATCATCCTCGAACATTCACCGCTGCTGCTCGATGCCGACCTCGTCGACATCGTCGC GCTCGGCAACTCGGAGACGCAGTGCGCGATCGCCCGGCGCATCGGCGTGCCGGCGCCAGTGTGCGCCGCCATCGCCGAGG TCGGCAGCGCGGCGGCTGCGCTCGAGCTGATCGAGAACGCCTATGCCGAGCTCGCGCCGTTCTCCTGGGATCGCATCGTC GAGCGCCACGGCCATCTCGCCGCCATCCGCGAAGCCATGCTGGTGCTCGATGATCTGCCGGCCGCCACGCGCGCGGCGCT GGTCGACAAGCTCTCGCAGACGCTCGCCCAGTTCGTCGTCGCCCGCAACTGGCTCAGCGCCGAACGCGCCGGGCGCATCA CCGACGAGGCGCGTGACCGCTCGACGATCACCATCGCGTCGCGGACGCGGGGCGAGGAGCTGCGCGGGCTGGTCCAGCAC CTGCGTGCGACGTCGCAGCTCACGGCAGGCCTGATCTTGCGCGCGCTGCTTTCGGGCAATGTCGAGTTGTTCGAGATCGC GCTGTCGGAGCTTTCAGGTCTGCCACGGGGGCGAGTGTCCGCGCTGCTCAAGGACCGCGGCCGCGCCAGCCTGCAGGGCC TGCTGCGCAAGGCGGGCATCCCCGATACGACGTTCGACGCGTTCATCATCGCGCTGGAGGTCTGCCGCGAGAACGGTTTC GCCGACAGCCTGAGCGGCGCGGCGATCCTGCGCCGCAAGATGGTCGAGCGCGTGCTGACGCATTGCGCCACCGATCGCGA CGCGGCCGAGCCGCTCCTGATCCTGCTACGCAGGTTCGCCACCGAATCCGCTCGCGACGCAGCCCGCGAGTTCTGCGACG AGGTGATGGCCGAGGATTTCGTGGCGGGTCTGGAGTTCGGGCTGATCGCGGCGTGA
Upstream 100 bases:
>100_bases AGTCACTTATGGTGAACGCTTTGTTAAGCGTCGTGGTTTATTTTCGGTGCTGTTGAGGCCCTCGTGCCTTGTTTGCAAAG TTGCGTAAGCCGGAAAGACC
Downstream 100 bases:
>100_bases GGTTGCGTAGCCCGGATGAGCGAAGCGATATCCGGGTTCTCCGAGGCAGCTCGCGTGACCCCGGATGTCGCTGCGCTCAT CCGGGCTACGAACGAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MIVRQFLSWVRTAPAGERAEATRALARAWLVSDLGEEDRFAAEGALLMLLDDPSPLVRQAMAEVFARSEDAPAAIVQALA TDQASVAAIILEHSPLLLDADLVDIVALGNSETQCAIARRIGVPAPVCAAIAEVGSAAAALELIENAYAELAPFSWDRIV ERHGHLAAIREAMLVLDDLPAATRAALVDKLSQTLAQFVVARNWLSAERAGRITDEARDRSTITIASRTRGEELRGLVQH LRATSQLTAGLILRALLSGNVELFEIALSELSGLPRGRVSALLKDRGRASLQGLLRKAGIPDTTFDAFIIALEVCRENGF ADSLSGAAILRRKMVERVLTHCATDRDAAEPLLILLRRFATESARDAAREFCDEVMAEDFVAGLEFGLIAA
Sequences:
>Translated_391_residues MIVRQFLSWVRTAPAGERAEATRALARAWLVSDLGEEDRFAAEGALLMLLDDPSPLVRQAMAEVFARSEDAPAAIVQALA TDQASVAAIILEHSPLLLDADLVDIVALGNSETQCAIARRIGVPAPVCAAIAEVGSAAAALELIENAYAELAPFSWDRIV ERHGHLAAIREAMLVLDDLPAATRAALVDKLSQTLAQFVVARNWLSAERAGRITDEARDRSTITIASRTRGEELRGLVQH LRATSQLTAGLILRALLSGNVELFEIALSELSGLPRGRVSALLKDRGRASLQGLLRKAGIPDTTFDAFIIALEVCRENGF ADSLSGAAILRRKMVERVLTHCATDRDAAEPLLILLRRFATESARDAAREFCDEVMAEDFVAGLEFGLIAA >Mature_391_residues MIVRQFLSWVRTAPAGERAEATRALARAWLVSDLGEEDRFAAEGALLMLLDDPSPLVRQAMAEVFARSEDAPAAIVQALA TDQASVAAIILEHSPLLLDADLVDIVALGNSETQCAIARRIGVPAPVCAAIAEVGSAAAALELIENAYAELAPFSWDRIV ERHGHLAAIREAMLVLDDLPAATRAALVDKLSQTLAQFVVARNWLSAERAGRITDEARDRSTITIASRTRGEELRGLVQH LRATSQLTAGLILRALLSGNVELFEIALSELSGLPRGRVSALLKDRGRASLQGLLRKAGIPDTTFDAFIIALEVCRENGF ADSLSGAAILRRKMVERVLTHCATDRDAAEPLLILLRRFATESARDAAREFCDEVMAEDFVAGLEFGLIAA
Specific function: Unknown
COG id: COG5330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42087; Mature: 42087
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVRQFLSWVRTAPAGERAEATRALARAWLVSDLGEEDRFAAEGALLMLLDDPSPLVRQA CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEECCCCHHHHHH MAEVFARSEDAPAAIVQALATDQASVAAIILEHSPLLLDADLVDIVALGNSETQCAIARR HHHHHHCCCCCHHHHHHHHHCCCHHHHHHHEECCCCEECCHHHHHHCCCCCCHHHHHHHH IGVPAPVCAAIAEVGSAAAALELIENAYAELAPFSWDRIVERHGHLAAIREAMLVLDDLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCC AATRAALVDKLSQTLAQFVVARNWLSAERAGRITDEARDRSTITIASRTRGEELRGLVQH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCHHHHHHHHH LRATSQLTAGLILRALLSGNVELFEIALSELSGLPRGRVSALLKDRGRASLQGLLRKAGI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCC PDTTFDAFIIALEVCRENGFADSLSGAAILRRKMVERVLTHCATDRDAAEPLLILLRRFA CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH TESARDAAREFCDEVMAEDFVAGLEFGLIAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIVRQFLSWVRTAPAGERAEATRALARAWLVSDLGEEDRFAAEGALLMLLDDPSPLVRQA CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEECCCCHHHHHH MAEVFARSEDAPAAIVQALATDQASVAAIILEHSPLLLDADLVDIVALGNSETQCAIARR HHHHHHCCCCCHHHHHHHHHCCCHHHHHHHEECCCCEECCHHHHHHCCCCCCHHHHHHHH IGVPAPVCAAIAEVGSAAAALELIENAYAELAPFSWDRIVERHGHLAAIREAMLVLDDLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCC AATRAALVDKLSQTLAQFVVARNWLSAERAGRITDEARDRSTITIASRTRGEELRGLVQH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCHHHHHHHHH LRATSQLTAGLILRALLSGNVELFEIALSELSGLPRGRVSALLKDRGRASLQGLLRKAGI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCC PDTTFDAFIIALEVCRENGFADSLSGAAILRRKMVERVLTHCATDRDAAEPLLILLRRFA CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH TESARDAAREFCDEVMAEDFVAGLEFGLIAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA